Clupea harengus (Atlantic herring): 105897661
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Entry
105897661 CDS
T09045
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
char
Clupea harengus (Atlantic herring)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
SAM_2
Ank_5
PDZ_6
PDZ
SH3_1
FERM_f0
SH3_9
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
105897661
NCBI-ProteinID:
XP_042565099
UniProt:
A0A8M1KTZ4
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All DBs
Position
1:427739..517165
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AA seq
2330 aa
AA seq
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MTMPLSPLSSDEEQQRMLGNSQHLYPGAEEEEEEEEEEEDEDGEENGELDGEEEDEEEEA
EVSTRRGSGQYHGGREEGHRQIGNMAGRLTGDRQMRPGNPGHAANPYSSNPGPTHQQTAN
QQQQQQQRRTRERSSSTAPPADDAHISMMVFRIGIPDIKQTKCLRFNPDATVWKAKQQVL
CSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQT
NLDEKQLAKLHTKASLKKFMDYIQSGSVEKIAKFLDKGVDPNYHDPDTGETPLTLAVQSD
QSAGETIRLLGMGGAHIDFRAKDGLTPLHKAVRCHGHTALLTLLSLAASPDYKDRRGLTP
LYHTVLTGGDTSCCETLLYHRAKVGIRDENGWDETHQACQNGNSQHLEHLLFYGADSTSQ
NASGNTALHICALYNKESCARILLYRGANKDTKNSSGQTPFQVAVMSGHFELGEIIKNHR
ETDVVPFLESPKYAPQRRESARTLALPHPHPFLRANSDNSMNLPDWMGNAAGSNIVSVQG
YKQGTLRSSSSPRGARTRSPSRGRAGDRDDRSRQTRGRQGGGSISSQGTVVGAQRRRLYS
AVPGRVFVATRSHTAQGEREITFNKGDKVKVLSVGEGGYWEGTVRGRTGWFPSDCVEEVA
LRTLEARSESRSERTKRLFRHYTVGSYDEFDAPSDYIIKEKTVLLQKKDNEGFGFVLRGA
KAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNM
IRQGGNSLMVKVVMVTRNPDLDDGTRKKIPQQSKRLSTPAIALRSKSMTSELEEMVDRAA
TPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEGGPGCGLRGQKENEAA
AFTAMRCPNYDQSGMGMMSSGAGLGYDRGQFASGHGPPHGMLRQKSVGVEEEKQSLHPPG
VKFARSLSVPGSDDIPPPPTTAPPEPPFSSAPPLGWRGKTSQQPSAVSVSQSTATSTHYQ
LYQQSVPLGHSGRERGGGAPQPDHTASYAHQAPTRTASRKQRCAPDKHRHSDASAADAEC
PEPGTTGARGAARRGDVGSRGGRGGSRGRRRRRWRSEGWCPAGEGPLVKQVQGGGHACRP
AGRAGAKGSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSVEAEPHLPLQQMPTALTLTPRP
SPACAPLHPGLRRPVDATGLCPRPCPSIRAQDSMDFTSQFGAAIVGAARRDRERFHEARR
RSASFFLSAEEDIEGEVAGGAGGRVSSSQQQQQQQLGTQPSPRLRPSKSIDEGNVLGRHL
HPPSPSNAPGLRAERSWTPRPAGAWPWLPGNVPQDDGPHAARPDDRRCRAPIFPGSLSNV
GAYSSSMVSNPSSSAPSNISGTSSYLVTSSSLAATTSTRPPSPRILRWEDEEVGAERDRD
TSGPAGGGGGGGGAAPREGLRVRFSEDKTVHTHHYQAQQHYQPSHKERERERQRERSRER
ERDMERAQRAQTPPSQQQQQQQASQQPRRPSFLRMESEAGSYILSLTPPPHQLRPSRPTP
PLGEEEEQEGVNGAPLLPVAQGIMVLPPPAPSVDADDEFVFADPLPPPLEFANSFDRGIP
SSGMSAYASLKESYILTGYSQHTPLPSPQAGDSTTSSLTSYDSEVANLTQSAPSPSSPHT
QPPSSPSHARVSHTSSSALQPSGPPPPPSVSPPPPPTSASAYHHHRPYSLSQTQQPHLYN
STHMAGRASSPTPPPHSISTVPPPPAYRSPSPAPSSAHRGVSPVAPAASVTSTAQSERTA
TVSTVATGGGLRRASDHRSPQLAAASSKTGESQETVVDSGIEELDSRSSSDHHLDSILAL
SRAERLERGGGVLPGEGDRASADLLESYMSYLDGQTFEMHNAMTATSSATTSAASGSAVS
TYPKVQRYRDGVTRRQTSTAPAAYRRREQHPEEEEEEEAEAAERQAEEDAYRIREAQNLS
RPSMMYYERPRTPEMKSAWGDGTQAAASAGREEGGVQSYIEGRKLHPPMSGMRASILNEL
SSKLHERNKGVESWGSQRSLRGHRPVTTPAGHARPPPSPPPPLAPPSRPQPPAPTPLSPP
APTPLTPPRPSTGPSIAPKRWSFSSSPAGSRARLICISAGGPPARSSPPSERPKLGPPRP
SSLPLLPTTPLYSSLYDLRGSITPPSPANPLGDPYFSPSPPLFAPSGAPPAANAALVVSR
SLSPTHFLSGVSSPPLHSIAPPTCLSYPHLPPPSPSKPFASKPLPYWTKYDVADWLGYLN
LAEHRERFLDNEIDGTHLPSLTKEDYLDLGVTRVGHRMNIERALRRVMDR
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgctcagtcccctctccagtgacgaggagcagcaaaggatgctgggaaac
agtcaacacctttatccaggggcagaggaggaggaagaggaagaagaggaggaggaggat
gaagatggagaggagaatggagaactggacggagaggaggaggacgaggaagaggaagcg
gaggtatccaccagacgtggcagcggccaataccacggaggcagggaagaggggcacagg
caaatcggcaatatggctggacgactgacaggtgacagacagatgcggcctgggaacccc
gggcatgccgccaacccttattcatccaacccaggacccacccaccaacagacagccaat
cagcagcagcagcagcagcagaggcggacccgggagcggagctcctccacggcgccccct
gctgacgacgcacacatcagcatgatggtgttccgcatcggcatccctgacattaaacag
acgaagtgcctgcgcttcaatcctgatgccacggtgtggaaggcgaagcagcaggtgctg
tgttctctcacggagtccctgagggacgtgctcaactatggcctcttccaaccggccacc
gacggacatgacgccaagttcctggaggaggagcgtctcctccgagagtacccacagtcc
tttgagaaaggcgtaccctacctggagtttcgctacaaaaccagggtctacaaacagacg
aacctggatgagaaacaactggctaaattgcacacaaaggccagtctgaagaagttcatg
gactacatccaaagcggatcagtggagaagatagccaaattccttgacaaaggtgttgac
ccaaactaccacgaccctgacactggagagactcctttgacactggcggtacagtcagac
cagtcggcgggggagaccattcgactgcttgggatggggggagcgcatatcgacttccga
gccaaggacggcttgacccccctacacaaggctgtccgttgccatggccacaccgcactg
ctgactctgctctctctggccgcatctccggactataaggaccggcgtggcctgacgccg
ctctaccacactgtgctgacagggggcgacacctcctgctgtgagacgctgctctaccac
agagccaaagtaggcatccgtgatgagaacggatgggacgagacccaccaggcctgccaa
aatggcaactctcagcatctggagcatctgcttttctacggggcagactccacttcccag
aatgcctcaggaaacactgccttgcacatttgtgctttatacaataaggagagctgtgcc
cgcattctgctgtacaggggagccaataaggacacaaagaacagcagtgggcagactccc
ttccaggtggctgtaatgtctggccattttgaacttggagagatcattaaaaaccacagg
gagactgacgtggtgcccttcttggagtcgcccaagtacgccccccagagacgggagagt
gcgcgcacacttgccctgcctcacccgcacccctttctgcgtgccaacagcgacaacagc
atgaacctgcctgactggatgggcaatgccgctggatccaacattgtgtctgtgcagggg
tataagcagggcaccctgcgcagctcaagcagtccacgtggggcccgcactcgctccccg
tctcgggggagggccggggacagagatgacaggagccgacagacacggggccgacagggg
ggtggctccatcagcagtcagggcacggtggtgggggctcagcggcgccgcctgtacagt
gccgtccccggacgagtgtttgtggccacgcgctcccacaccgctcagggcgagcgcgag
ataaccttcaacaagggagacaaggtcaaagtgctgagtgtgggtgaaggaggctattgg
gaggggacagtgaggggtcggactggctggttcccctcggactgtgttgaggaagtagca
ctccgcaccctggaggctcgctcagagagccgcagtgagaggaccaagcgactcttcagg
cactacaccgtgggctcctacgacgagtttgacgcgcccagtgactacataatcaaagag
aagaccgtgctcctgcagaaaaaagacaatgaaggtttcggttttgttctaagaggggcc
aaggcccagacacccattgaggagttcactcccactccggccttcccagcactgcagtac
ctcgagtctgtcgacgagggaggtgtagcctggagagccggtctgcgaatgggagacttc
ctcattgaggtgaatgggcagaatgtggttaaggtgggacacagacaggtggtcaacatg
atccgtcaaggtggcaacagcctgatggtgaaggtcgtcatggtcacccgcaatcctgac
ttggacgatggcaccagaaagaaaatcccccaacagagcaagcggctgagcacaccggca
atagccctgcgctccaaatccatgacctcggagctagaggagatggtggacagagctgct
acgccatggaaaaaaaaatcagagttcgaatcctctcaagtcaccgagaagaagaggaca
gtctatcagatggctttgaataaactggatgaaattttggcggcagctcaacagaccatc
agcaccaatgaaggagggccagggtgcgggctcaggggtcaaaaagagaacgaggccgca
gcttttacggccatgaggtgtccaaattatgatcagtcggggatggggatgatgtcgtcg
ggggcggggcttggttatgaccgggggcagtttgcctctggccatggccctcctcacggt
atgctgcgacagaagtccgtcggggtcgaggaggagaagcagtccctccatcctccgggc
gtgaagttcgctcgcagcttgtccgtccccggctcagacgacatccccccaccccccacc
acggctccacccgagccccccttctcctcggctccgcctctcggctggaggggcaagaca
tcccagcagccgtccgctgtgtccgtgtcccagtccactgccacctccacccactaccag
ctctaccaacagtccgtgcccctcggccacagtggcagggagaggggtggcggagctcca
cagcccgaccacaccgcctcctatgcccaccaggctcctaccaggaccgcctcccgcaag
caacgctgtgcccccgacaagcatcgccacagtgatgcctcagcagcagatgcagagtgc
ccagagccaggcacaacgggggcccggggagcagcgaggcggggtgatgtcgggagcagg
ggggggcggggcgggagcaggggcaggcggcggcggcggtggcgttccgaagggtggtgc
ccggcgggggaaggccctctggtcaagcaagtccaaggtggaggacatgcgtgcaggcca
gctggccgcgctggggcaaagggctcggtggagaagagctcaatccccatccccaccatc
atcgtcaaggcgccctccaccagcagcagcggccgtagcagccagggcagcagcgtggag
gctgaaccccaccttcctcttcagcagatgccgacagctctaaccctaaccccccggcca
tcacccgcctgcgcccccctccaccccggcctccgccgccccgtcgatgccaccggcctt
tgcccccgtccctgcccctccattcgagcgcaggacagtatggacttcaccagccagttt
ggcgcggccatcgtgggggcggcccgacgagaccgtgagcgcttccacgaggcccgcagg
aggagcgcctccttcttcctctccgctgaggaggacatcgagggagaagtagcaggggga
gctggaggaagggtcagcagctctcaacagcagcagcagcagcagctcggcacccagcct
tctcctcgcctgcgcccatctaagtccatcgacgagggcaatgttctcgggcgacacctt
catccaccaagccccagcaatgcccccggccttcgggctgaaaggtcctggacccctcgt
cccgctggggcttggccctggctgcccgggaacgtgcctcaggacgatgggccgcatgcg
gcgagaccggacgaccggaggtgcagagcacccattttccccggcagcttgtccaacgtg
ggggcgtactcctcctccatggtctccaacccgtcttcctcggcgccctccaacatctcg
ggcacctcctcctacctggtcacctcctcctcgctggcagccactacttccacacggcca
ccttctcccaggatccttcggtgggaagacgaggaggtcggggcggaacgagacagggac
acgagcggtccggcaggaggtggaggaggaggaggaggagctgcgcctcgagaaggattg
agagttcgcttctcagaagataagacggtccacacacaccactaccaggcccagcagcac
taccagcctagccacaaggagcgtgagcgggaacgccaaagggagaggtcccgggagagg
gagagagacatggagagggcgcagcgagcacagacaccaccttcccagcagcagcagcag
cagcaggcatcccagcagcctcgacggccctccttcctgcgtatggaaagtgaggcgggc
tcctacatcctttctcttaccccccctccccaccagctacgaccgtccagacccacgcca
cccctgggggaggaggaggagcaggagggggtgaacggggcaccgctgctgccggtggct
cagggcatcatggtcttgccgccccccgctccctcagtggatgccgatgacgagtttgtg
ttcgccgaccctctgccgccaccgctggagttcgccaacagcttcgaccgaggcattccg
tcgagcggcatgagcgcctacgccagtctgaaggagtcctacatcctgactggctactcc
cagcacacgcccctgccctccccccaggccggggactccaccacctccagcctcacctcc
tacgacagtgaggtggccaacctgactcagtcagccccgtcgccctcctctccccacacc
cagcccccatcctccccgtcccacgccagagtctcacacacctcttcctcggccctgcag
ccgtctggtccgcctccccctcccagcgtctccccacctcctccgcccacctcggcctcc
gcctatcaccatcaccggccctacagcctctcccagacgcagcagccccacctgtacaac
agcacccacatggcgggacgtgcctcttcgcccacccctccaccacactccatcagcaca
gtgcctccaccccctgcctaccgaagcccatcacctgcaccctcctctgcccaccgggga
gtctcgcctgtcgctcccgccgcctccgtgaccagcacggcccagagcgagcgcaccgcc
accgtctccacggtagccacgggcggcgggctccgcagggcgtcggaccaccggtctccc
cagctggccgccgcctcctccaagactggcgagtcgcaggagacggtggtggactcgggc
atcgaggagctggacagtcgcagcagcagcgatcaccacctggacagcatcctggccctg
agccgcgccgagcgcctggagcggggcggaggagtgctccctggggagggcgacagggcc
agcgccgacctgctcgagtcctacatgagctacctggatggacagacctttgagatgcac
aacgctatgacggctaccagctcggccaccacctccgctgccagtggctccgccgtctcc
acctatcccaaagtgcagcgttaccgcgatggtgtgacccgccggcagaccagcacggca
cccgcggcctaccggcggcgcgaacagcatccggaggaggaggaggaggaagaagcggag
gcggcagagcggcaggcggaggaggacgcctaccggattcgggaggcgcagaacctgagc
cggccctccatgatgtactacgagagaccccgcactcctgagatgaaatccgcgtggggg
gacgggacacaggcggcagcctccgcaggcagggaggagggaggggtgcagagctacatc
gaggggcgcaagctgcacccgcccatgtccggcatgagggccagcatcctcaacgagctg
agcagcaagctgcacgagaggaacaaaggcgtggagagctggggcagccagaggtcgctc
agaggtcacaggccggtcactactccagctggtcacgctcgccctccccccagcccccct
ccgccactagctcctcccagccggccccagccccccgctcccactcccctgtctccccca
gcgcctactccccttaccccacctcgcccaagcaccggcccgtctatcgcaccaaagcgc
tggagtttcagttcatccccagccgggagtcgcgcaaggctgatatgcatcagcgccggc
gggcccccagcccgctcatctcccccctccgaacggcccaagctgggcccgccgcggccc
tcatcactgcccctcctccccaccacgccgctctacagcagcctgtatgacctgcgcggc
tccatcacgccaccctctcccgccaatccgctgggagacccctacttctccccctcgcca
cccttgtttgccccctcgggggcgccgcccgccgccaacgccgcgctggtggtctcgcgc
tcgctttcccccacgcacttcctctcgggggtgtcatcgccgccgctgcactccatagcg
ccccccacctgcctcagctacccgcacctgccgcccccctcgccttccaagcccttcgcc
tccaagccgctgccctactggaccaagtatgacgtggccgactggctgggctacctgaac
ctggctgaacaccgcgagcggttcctggacaacgagatcgacgggacgcacttgccctcc
ctcacgaaggaggactacctggacttgggtgtgacgcgtgtgggacaccgcatgaacatt
gagagggcgctacgcagagtgatggacaggtga
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integrated database retrieval system
