Clupea harengus (Atlantic herring): 105897671
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Entry
105897671 CDS
T09045
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecule (CAM) interaction
char04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105897671 (lrrc4ba)
04517 IgSF CAM signaling
105897671 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105897671 (lrrc4ba)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
NGL family
105897671 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
LRR_RPS2
Ig_6
Motif
Other DBs
NCBI-GeneID:
105897671
NCBI-ProteinID:
XP_031414272
Ensembl:
ENSCHAG00000000039
UniProt:
A0A6P8ETT3
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All DBs
Position
1:647453..679030
Genome browser
AA seq
762 aa
AA seq
DB search
MRITTVTGLSSPSPLLLLAQLLLWLLPFGLDTAEAASTNCPSPCQCSNQASRVICTRRNL
AEVPDSISVNTRYLNLQENSIKVIKSETFKNLRHLEILQLSKNQISQIEVGAFNGLPNLN
TLELFDNKLTQVPSAAFEYLSKLRELWLRNNPIETLPAYVFNRVPSLRRLDLGELKKLEH
ISEAAFVGLDNLRYLNLGMCGLKDIPNLTPLGRLEELELSGNRLEIIRPGSFQGLVSVRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLPKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLRGRYIGELDQRHFTCFAPVIVEPPVDLNVTE
GMAAELKCRTSTSMTSVNWFMPNGTLMTHGSYKVRISVLHDGTLNFTNVTLRDTGPYTCV
VSNTAGNTTATALLNVTAAGPSDNYTYFTTVTVETVDRDEDDLVNRSKSPALRNHNQTII
RFPGPTPSWGLVPTTASSLSWSASSTRGTFTVPVTMDPTYSGLDDVMKTTKIIIGCFVAI
TFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEVGASCAGVRGSGISGGTTMSQG
SVGGSGTCGGGGGGGGGGGLGGIGGSQSLRLHHPEIVNLPNLARAEHLNHYYKAHHFNNN
MLGLGLGGMSSGMGLINNNNNPSPCSQGGPPPPGSGPMSCSQMPMSMGSGTATLGSLPTP
VPLPQLSIHGSLKGLMGKGQNSQIEPLLFKSGSKENVQETQI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccggcctttccagcccctcccccctcctcctattggcccag
ctgctcttgtggctcctccccttcggcctagacacagcagaggccgcctccacaaactgt
ccctccccttgccaatgctccaatcaggcgagccgagtgatctgtaccagacggaacctg
gctgaggtgccagacagtatatcagtcaacacacgatacctcaacctgcaggagaactcg
ataaaggtgatcaaatcggagacgttcaagaacctgcggcacctggagattcttcagctc
tccaagaatcagatcagccagatcgaagtgggcgctttcaatggcctccccaacctcaac
accctggagctgttcgacaacaagctcacgcaggtgccgtcggcggccttcgagtacctc
agcaaactccgcgagctctggctccgcaacaaccctatcgagacgctcccggcgtacgtc
ttcaaccgcgtgccgtcgctgcggcggctggacctgggcgagctcaagaagctggagcac
atctcggaggcggccttcgtgggcctggacaacctgcgctacctgaacctgggcatgtgc
ggcctgaaggacatccccaacctgacgcccctgggccggctggaggagctggagctgtcg
ggcaaccggttggagatcatccgcccgggctccttccaaggcttggtctcggtacgcaag
ctgtggctcatgcactcgcagatgtcggtgatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctgtcgcacaactcgctgcactcgctgccgcacgacctgttc
acgccgctgcccaagctggagcgcgtgcacctcaaccacaacccgtgggtgtgcaactgt
gacgtgctgtggctcagctggtggctcaaggagacggtgccgagcaacaccacctgctgc
gcccgctgccacgctcctccgggcctgcgggggcgctacatcggcgagctggaccagcgc
cacttcacgtgcttcgcgccggtgattgtggagccgcccgtcgacctgaatgtgacagag
ggcatggcggccgagctgaagtgccgcaccagcacgtcaatgacgtcggtgaactggttc
atgcccaacggcacgctgatgacgcacggctcgtacaaggtgcgcatctcggtgctccac
gacggcacgctcaacttcaccaacgtgacgctacgcgacactgggccgtacacgtgcgtg
gtgagcaacacggccggcaataccaccgccacggccttgctcaacgtcaccgccgccggg
cccagcgacaactatacctacttcaccacggtcaccgtggaaaccgtggacagggacgag
gatgacctggtgaaccggtcaaaatcacccgcactgcgcaaccacaaccaaaccataatc
cgcttcccgggccccacgccctcctggggcctggtacccaccacagcctcttcgctgtcc
tggtcggcctcgtccacccggggcaccttcaccgtgcccgtcacgatggaccccacctac
tcgggcctggacgacgtgatgaagaccaccaagatcatcatcggctgcttcgtggccatc
accttcatggcggccgtcatgttggtggtcttctacaagctgcgcaagcagcaccagctt
cacaagcaccacggccccgcccgagccatcgagatcatcaatgtggaggacgaggtgggc
gcctcctgtgccggcgtgcggggaagcggcatctccggcggcaccaccatgagccagggc
tccgtcggcgggagtggaacctgcggtggaggaggaggcggcggtggaggaggaggacta
ggaggaataggagggagccagagcctgcggctgcaccacccggagatcgtcaacctgccc
aacctggcacgggcagagcacctgaaccattactacaaggcgcaccacttcaacaacaac
atgctgggcctgggccttggcggcatgagctcaggaatgggcctcatcaacaacaacaac
aacccctcgccctgctcccagggggggccgccgccgccgggctccggccccatgtcctgc
tcgcagatgcccatgtcgatgggcagcggcacggccacgttgggctcgctgccaacgccg
gtgcccctgccccagctgagcatccacggctcgctgaagggcctgatgggaaaagggcaa
aactctcagatcgagcccctgctcttcaagagtggctccaaggagaatgtgcaagagact
cagatctga
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