KEGG   Clupea harengus (Atlantic herring): 105897695
Entry
105897695         CDS       T09045                                 
Symbol
coro1a
Name
(RefSeq) coronin-1A
  KO
K13882  coronin-1A
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    105897695 (coro1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105897695 (coro1a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105897695 (coro1a)
   04147 Exosome [BR:char04147]
    105897695 (coro1a)
Membrane trafficking [BR:char04131]
 Endocytosis
  Phagocytosis
   Coronins
    105897695 (coro1a)
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     105897695 (coro1a)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105897695 (coro1a)
SSDB
Motif
Pfam: Beta-prop_THOC3 DUF1899 Beta-prop_WDR5 WD40 WD40_4 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_Gbeta EIF3I DSE1_N Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_EML ASA1 Beta-prop_WDR36-Utp21_1st Trimer_CC WD40_RFWD3 PAC11 WDCP WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_WDR19_1st TRM82_WD Beta-prop_HPS5 Beta-prop_SCAP ABC_tran_CTD ESR1_C Beta-prop_NUP159_NUP214 MYCBP_helical bZIP_1 DUF7310 DivIC TolA_bind_tri
Other DBs
NCBI-GeneID: 105897695
NCBI-ProteinID: XP_012680106
Ensembl: ENSCHAG00000000024
UniProt: A0A6P3VSN8
LinkDB
Position
1
AA seq 455 aa
MSRKVVRSSKFRHVFGQGVKADQCYDDIRISQMTWDSNFCTVNPKFVAMIVDASGGGAFI
VLPLTKSGRIDMSYPTVCGHTGPVLDIEWCPHNDNIIASGSEDCSVMIWEMPDGGLVSPL
TTPLVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVARGEAVVRMDTQHTDLIYS
VCWNRDGTQILTSCKDKTLRLLDPRKGTVITEKEKPHEGSRPVRAVFVNDGKILTTGFSK
MSERQVALWDPSNFSEALTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYTSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPVVMTVPRKSDLFQE
DLFPDTIGPEPSVEADDWFNGKDGQPILISLKDGYVASKPKEFKVIKSLLATTASTSPHS
QGDNSGLQALQAEMKEMKATIEELTKRVSELESKD
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtcccgaaaggtggtccggtccagtaaattccgccacgtcttcggccagggggtgaag
gcagaccagtgctatgacgacatcaggatctcccagatgacctgggacagcaacttctgc
actgtcaaccccaagtttgtggccatgatagtggatgccagtggtggaggagcattcatt
gtgcttccactgaccaagtctggccgcattgacatgtcctaccccactgtatgtggccat
actggacctgtcctggatattgagtggtgtccacacaatgacaacatcattgccagtggc
tccgaggactgcagtgtcatgatctgggagatgcctgacggtggcctggtctcgcccctg
acaacaccgctggtgaaactggagggccattccaagcgtgttggcatcctcagctggcac
cccacagcccacaatgtgctgatgagtgcaggctgtgataacgtggtgatcctgtggaac
gtggcccgcggggaggcagtggtgaggatggacacccagcacactgacctcatctacagc
gtctgctggaacagggatggcacacagatcctcacctcctgcaaggacaagacgctgcgc
ttgctcgacccgcgcaagggcaccgtcatcaccgagaaggagaagccgcatgagggctcg
aggccagtcagggctgtgtttgtgaacgacgggaagatcctaaccactggcttcagcaaa
atgagcgaaagacaagtggctctctgggacccaagtaatttctcggaagccctcaccctt
caggagctcgacacgagcagtggagtgctgctgcctttctttgatcccgacaccggcatt
gtgtatctgtgtggaaagggggacagtagcatccgctacttcgaggtgaccgacgaggcc
ccctacgtccactacctgtccatgtacaccagcaaggagagtcagaagggcatgggctac
atgcccaaacgaggtctcgaagtcaacaaatgcgagattgccagattctataaacttcat
gagaggaaatgtgagcccgtcgttatgactgtcccccgtaagtctgacttgttccaagag
gatctgtttcccgacaccattggtccagagccctctgtggaagccgatgattggtttaat
ggcaaagatggccaaccaatcttgatctccttgaaggatgggtatgtggccagcaagccc
aaagagttcaaagtgatcaagagcctgttggccaccacagcttccacctccccccattcc
cagggcgacaactcgggacttcaggccctgcaggccgagatgaaagagatgaaagccacg
attgaagagctcaccaaacgagtgagcgaattagagagcaaagactaa

DBGET integrated database retrieval system