KEGG   Clupea harengus (Atlantic herring): 105897731
Entry
105897731         CDS       T09045                                 
Symbol
rtn1b
Name
(RefSeq) reticulon-1b isoform X1
  KO
K20721  reticulon-1
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105897731 (rtn1b)
   03036 Chromosome and associated proteins [BR:char03036]
    105897731 (rtn1b)
Membrane trafficking [BR:char04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    105897731 (rtn1b)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    105897731 (rtn1b)
SSDB
Motif
Pfam: Reticulon
Other DBs
NCBI-GeneID: 105897731
NCBI-ProteinID: XP_031437072
Ensembl: ENSCHAG00000016317
UniProt: A0A6P8GNW0
LinkDB
Position
15:complement(11214385..11261800)
AA seq 821 aa
MSVKPSEEPSSEAGWFGDDFEKIDRFGSNVAQFDDLDGQRMKDWEDETSEQKQFSHHPES
NRQPLPVVMETASTDKSEPLKKSSDMDDLYTSLLSNQSYSFQKDPPSTYFSGSAGGKSTG
GGGSGGSGGGGGLMDDLMSGLDSHTMFSSDSGIEMTPGDPSDLTSSRKLSESDRGVGAGA
GGVTSDYSYMDISRPQQQQQHSPLDDDDWGSISSKPGDFLSGLGDMGGMGASSAGGNAGG
YMEKGGSGSGVAGGAGAGAGVETLGPALDAQSFPYVEEPSDEELSDYQPYRSPGAGSSAS
PVKITLTETPPRSPSPNAPMAVSERESILSLGLEGMPTVTLSEPEDDSPGSSTPPFPDDS
PSDHKSGDSKSFSPDKTPAPKQPSPAEKPMPPMPPMPSSPSSGSAYPRSPNDAEGSSGGE
SGDSEIELVTEEPTAAAFAHSAASSYMSFSKPSAPAPTPTPAPALPPSLVSAPPPSSAAT
LNQYSILREEREAELDSELAMESCGEESPQRGLHHHEAPAPKGPRKPETSLFASAPAMPA
TAPPAPSPPAAPVPAPSAPAPQKAPAVEEVKAKPSPAPSAPPTTTAPPEPKLEKPVAEEK
PGERRRPSQGKGPDRQAGPPPAVFQGLSREKAMELLYWRDMKQSGLLFGSVLLLLFSLTQ
FSVVSVVAYLALAALSASISFRVYKSVLQAVQKTDEGHPFKCRAYLDMEISLSQDQMQKY
AENVQSYLNSMLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSM
PVVYEKYQAQIDQYMGLIRTQVNSVVGKIQEKIPGAKRKAE
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgtcagtgaagccgagcgaggagccaagttcggaggcggggtggttcggggacgatttc
gagaagattgatcgctttgggagcaacgtagcccagttcgacgacttggatgggcagcga
atgaaagactgggaggacgaaacaagtgaacagaaacagttctcgcaccatcccgagagc
aaccggcaaccgctccctgttgtcatggaaactgcatctacagacaagtcagagcctttg
aagaagtccagtgacatggacgacctctacacctccctcctgtccaatcagagctactcc
ttccagaaggaccccccctccacctacttctctgggagcgcgggtggaaagagcacaggg
ggtgggggtagtgggggtagcggcggtggagggggcctgatggatgacctgatgtctggg
ctggactcgcacaccatgttcagctccgactcgggcatcgagatgacccccggcgacccg
agcgacttgacctcctcccgcaagctgtcggagtctgaccgcggcgttggtgccggtgct
ggcggcgtcacgtccgattacagctacatggacatcagtcgcccgcagcagcagcagcag
cacagtcctctggatgatgacgactgggggagcatcagcagcaagcccggcgacttcctc
tccggcctgggagatatgggcgggatgggagccagtagcgctggaggaaacgctggaggc
tacatggagaagggaggctctgggtcaggggtcgccggcggagcaggggcaggggcgggt
gtggagaccctgggcccggccctggacgcccagtccttcccgtacgtggaggagccgtct
gacgaggagctgtccgactaccagccgtaccgctccccgggggctggcagcagcgccagc
ccggtgaagatcaccctgacggagacgccgccgcgctccccgtcacctaacgctcccatg
gccgtgtccgaaagggagagcatcctgagcctggggctggagggcatgcccaccgtcacc
ctgtccgagccagaggacgacagcccaggctcctccacaccacccttcccagacgactca
ccgtctgaccacaaatcgggcgactccaagagtttttccccagacaagacccccgccccc
aaacagcccagcccagcggagaaacccatgccccccatgccccccatgcccagcagcccc
tcctccggctccgcctacccccgctcccccaacgatgccgagggcagcagcggcggcgag
tcaggcgactccgagatcgagctggtgaccgaggagccgacggccgccgcctttgcccac
agcgcggcctccagctacatgagcttcagcaagccctcagcccccgcccccacccccacc
cccgcccccgccctgcctccgtcactggtctccgcgcctcctccctcctctgcggccaca
ctcaaccagtacagcatcctgcgcgaggagcgggaggcggagctggacagcgagctggcg
atggagtcctgcggcgaggagagcccccagcgcggcctccaccaccacgaggccccggcc
cccaagggcccccgcaagcccgagaccagtctgtttgcgtcggcccccgcaatgcccgca
accgcccctccggcgccgtcacctccagccgcccccgtccctgctccgtccgctcctgcc
ccccagaaagccccggctgtggaggaagtcaaagccaagcccagccccgctccaagcgcc
ccccccacaaccacggcgcccccggagcccaagctggagaagcccgtggctgaggagaag
cctggagagcggaggcgccccagccagggcaaaggcccagacagacaggccgggccgccg
ccggccgtcttccagggcctcagcagagagaaagcgatggagcttctttactggcgggac
atgaagcagtcagggctgctgtttggcagcgtgctgctcctgctcttcagcctgacccag
ttcagcgtggtgagcgtggtggcctacctggccctggccgccctctccgcctccatcagc
ttcagggtctacaagtccgtgctacaggccgtgcagaagacagacgagggacaccccttc
aagtgcagggcatatctggatatggagatctccctgtcccaggaccagatgcagaagtac
gctgagaatgtgcagtcctacctcaacagcatgctgaaggagcttcgcagactcttcctg
gtacaggacctggtggactcactaaagtttgctgttctgatgtggcttctgacctacgtg
ggagccctcttcaatggactcactctgctcatcatggctgtggtgtccatgttctccatg
cctgtggtgtatgagaaataccaggcacagattgaccagtacatgggcctaataaggact
caggtcaactctgtagttgggaagatccaggagaagatcccaggggccaagcgaaaggct
gagtag

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