Clupea harengus (Atlantic herring): 105897731
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Entry
105897731 CDS
T09045
Symbol
rtn1b
Name
(RefSeq) reticulon-1b isoform X1
KO
K20721
reticulon-1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105897731 (rtn1b)
03036 Chromosome and associated proteins [BR:
char03036
]
105897731 (rtn1b)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105897731 (rtn1b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105897731 (rtn1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
105897731
NCBI-ProteinID:
XP_031437072
Ensembl:
ENSCHAG00000016317
UniProt:
A0A6P8GNW0
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Position
15:complement(11214385..11261800)
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AA seq
821 aa
AA seq
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MSVKPSEEPSSEAGWFGDDFEKIDRFGSNVAQFDDLDGQRMKDWEDETSEQKQFSHHPES
NRQPLPVVMETASTDKSEPLKKSSDMDDLYTSLLSNQSYSFQKDPPSTYFSGSAGGKSTG
GGGSGGSGGGGGLMDDLMSGLDSHTMFSSDSGIEMTPGDPSDLTSSRKLSESDRGVGAGA
GGVTSDYSYMDISRPQQQQQHSPLDDDDWGSISSKPGDFLSGLGDMGGMGASSAGGNAGG
YMEKGGSGSGVAGGAGAGAGVETLGPALDAQSFPYVEEPSDEELSDYQPYRSPGAGSSAS
PVKITLTETPPRSPSPNAPMAVSERESILSLGLEGMPTVTLSEPEDDSPGSSTPPFPDDS
PSDHKSGDSKSFSPDKTPAPKQPSPAEKPMPPMPPMPSSPSSGSAYPRSPNDAEGSSGGE
SGDSEIELVTEEPTAAAFAHSAASSYMSFSKPSAPAPTPTPAPALPPSLVSAPPPSSAAT
LNQYSILREEREAELDSELAMESCGEESPQRGLHHHEAPAPKGPRKPETSLFASAPAMPA
TAPPAPSPPAAPVPAPSAPAPQKAPAVEEVKAKPSPAPSAPPTTTAPPEPKLEKPVAEEK
PGERRRPSQGKGPDRQAGPPPAVFQGLSREKAMELLYWRDMKQSGLLFGSVLLLLFSLTQ
FSVVSVVAYLALAALSASISFRVYKSVLQAVQKTDEGHPFKCRAYLDMEISLSQDQMQKY
AENVQSYLNSMLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSM
PVVYEKYQAQIDQYMGLIRTQVNSVVGKIQEKIPGAKRKAE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaagccgagcgaggagccaagttcggaggcggggtggttcggggacgatttc
gagaagattgatcgctttgggagcaacgtagcccagttcgacgacttggatgggcagcga
atgaaagactgggaggacgaaacaagtgaacagaaacagttctcgcaccatcccgagagc
aaccggcaaccgctccctgttgtcatggaaactgcatctacagacaagtcagagcctttg
aagaagtccagtgacatggacgacctctacacctccctcctgtccaatcagagctactcc
ttccagaaggaccccccctccacctacttctctgggagcgcgggtggaaagagcacaggg
ggtgggggtagtgggggtagcggcggtggagggggcctgatggatgacctgatgtctggg
ctggactcgcacaccatgttcagctccgactcgggcatcgagatgacccccggcgacccg
agcgacttgacctcctcccgcaagctgtcggagtctgaccgcggcgttggtgccggtgct
ggcggcgtcacgtccgattacagctacatggacatcagtcgcccgcagcagcagcagcag
cacagtcctctggatgatgacgactgggggagcatcagcagcaagcccggcgacttcctc
tccggcctgggagatatgggcgggatgggagccagtagcgctggaggaaacgctggaggc
tacatggagaagggaggctctgggtcaggggtcgccggcggagcaggggcaggggcgggt
gtggagaccctgggcccggccctggacgcccagtccttcccgtacgtggaggagccgtct
gacgaggagctgtccgactaccagccgtaccgctccccgggggctggcagcagcgccagc
ccggtgaagatcaccctgacggagacgccgccgcgctccccgtcacctaacgctcccatg
gccgtgtccgaaagggagagcatcctgagcctggggctggagggcatgcccaccgtcacc
ctgtccgagccagaggacgacagcccaggctcctccacaccacccttcccagacgactca
ccgtctgaccacaaatcgggcgactccaagagtttttccccagacaagacccccgccccc
aaacagcccagcccagcggagaaacccatgccccccatgccccccatgcccagcagcccc
tcctccggctccgcctacccccgctcccccaacgatgccgagggcagcagcggcggcgag
tcaggcgactccgagatcgagctggtgaccgaggagccgacggccgccgcctttgcccac
agcgcggcctccagctacatgagcttcagcaagccctcagcccccgcccccacccccacc
cccgcccccgccctgcctccgtcactggtctccgcgcctcctccctcctctgcggccaca
ctcaaccagtacagcatcctgcgcgaggagcgggaggcggagctggacagcgagctggcg
atggagtcctgcggcgaggagagcccccagcgcggcctccaccaccacgaggccccggcc
cccaagggcccccgcaagcccgagaccagtctgtttgcgtcggcccccgcaatgcccgca
accgcccctccggcgccgtcacctccagccgcccccgtccctgctccgtccgctcctgcc
ccccagaaagccccggctgtggaggaagtcaaagccaagcccagccccgctccaagcgcc
ccccccacaaccacggcgcccccggagcccaagctggagaagcccgtggctgaggagaag
cctggagagcggaggcgccccagccagggcaaaggcccagacagacaggccgggccgccg
ccggccgtcttccagggcctcagcagagagaaagcgatggagcttctttactggcgggac
atgaagcagtcagggctgctgtttggcagcgtgctgctcctgctcttcagcctgacccag
ttcagcgtggtgagcgtggtggcctacctggccctggccgccctctccgcctccatcagc
ttcagggtctacaagtccgtgctacaggccgtgcagaagacagacgagggacaccccttc
aagtgcagggcatatctggatatggagatctccctgtcccaggaccagatgcagaagtac
gctgagaatgtgcagtcctacctcaacagcatgctgaaggagcttcgcagactcttcctg
gtacaggacctggtggactcactaaagtttgctgttctgatgtggcttctgacctacgtg
ggagccctcttcaatggactcactctgctcatcatggctgtggtgtccatgttctccatg
cctgtggtgtatgagaaataccaggcacagattgaccagtacatgggcctaataaggact
caggtcaactctgtagttgggaagatccaggagaagatcccaggggccaagcgaaaggct
gagtag
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