Clupea harengus (Atlantic herring): 105897757
Help
Entry
105897757 CDS
T09045
Symbol
six6b
Name
(RefSeq) homeobox protein SIX6b
KO
K19473
homeobox protein SIX3/6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105897757 (six6b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
105897757 (six6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
FAM199X
HTH_3
DUF3043
Motif
Other DBs
NCBI-GeneID:
105897757
NCBI-ProteinID:
XP_012680172
Ensembl:
ENSCHAG00000016726
UniProt:
A0A6P3VSF4
LinkDB
All DBs
Position
15:11374368..11378965
Genome browser
AA seq
245 aa
AA seq
DB search
MFQLPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPGACEVLNRNESVLRARAIV
AFHTGNFRELYHILENHKFTKESHSKLQALWLESHYQEAEKLRGRPLGPVDKYRVRKKFP
LPKTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVMSNGSVRSLTGEDSAVDRLGTASSPEASLSSKAAASAISITSSD
SECDI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaattgccaatcttgaatttcagtccccagcaagttgcgggggtatgcgagact
ttggaggagagtggggacatcgaacgcctcggccggttcctctggtcgctgccggtcgcc
cctggtgcctgcgaggtccttaaccgcaatgagtcggtcttgcgggctagggccatcgtg
gcttttcacactgggaatttccgagagctctaccacattctggagaaccacaagttcacc
aaagagtcgcattccaaactgcaagcgctttggctggagtcgcactaccaggaggcggag
aagctccggggccgcccgctaggaccagtggacaaatacagagtacggaagaagtttcca
ctgcccaaaacaatttgggatggcgaacaaaagactcattgcttcaaagaaaggacccgg
catttgctccgagagtggtacctccaagacccttacccgaaccctagcaaaaagagagag
ctcgcacaagctacaggactcactcccacccaagtcggaaactggtttaaaaaccggaga
caaagggatagagccgcggctgcgaaaaacaggttacaacaacaagtgatgtctaacggc
tcggttcgatccctgactggagaagacagcgcagtggaccgtctcggaaccgcgtcgagc
cccgaagcaagcctgtcgagcaaagcggccgcgtcggccatctccatcacttcgagcgac
agcgaatgtgacatctga
DBGET
integrated database retrieval system
