KEGG   Clupea harengus (Atlantic herring): 105897813
Entry
105897813         CDS       T09045                                 
Symbol
cdh11
Name
(RefSeq) cadherin-11
  KO
K06803  cadherin 11, type 2, OB-cadherin
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:char04515]
    105897813 (cdh11)
Cell adhesion molecules [BR:char04515]
 Cadherins
  Major cadherins
   105897813 (cdh11)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_CELSR2_9th ASFV_J13L Chitin_synth_1N Cadherin_4
Other DBs
NCBI-GeneID: 105897813
NCBI-ProteinID: XP_012680247
Ensembl: ENSCHAG00000022172
UniProt: A0A6P3VSJ3
LinkDB
Position
6:1463533..1538482
AA seq 798 aa
MKEGLGRKMWLLCLSALMCGVSSGVSSGLDRTHRRHMGLHRHRGERGKEGQVLQRSKRGW
VWNQFFVIEEYTGPDPVLVGRLHSDVDSGTGYIKYILSGEGAGTIFVIDDKTGNIHATKT
LDREEQAQYTLTAQAVDRDTNKPLEPPSEFIVKVQDINDNPPEFLHGPYYARVPEMSNVG
TSVMTVTASDADDPTYGNSARLVYSILQGQPYFSVEPQTGVIRTALPNMDREARQEYDVV
IQAKDMGGHMGGLSGTTEVKITLTDVNDNPPKFPQSVYTMGVSEDKVPGEEVGRMKAKDL
DMGENGMVEYRFLEGDGMSVLEISKDSETQEAVIKLKKVVDYEKKKTYTVKVEASNPHVD
PRFMAWGPYKDTATVKVSVEDADEAPVFTETSYGFEVEENAPEGTVVGRVHARDTDTANN
PVRYMIPRYTDLGQFFSITPEDGVIKTSRPLDRETQAWHNISVSATEIGGHHQDAKVRVN
IKVKDVNDNPPEFATNNEVLVCENVVPGKLIETVSAIDKDEMAHRQYFHFSLPPEVANNH
NFTLKDNKDSTASIYVMRKGFSRMTQDMYFLPIEINDNGVPPMSSTQTLIIRVCSCDSKE
TILSCNVEPFILPAGLSTGALIAILACIVILLAIVVLFVALRRQKKEPLIMYEEEDIREN
IITYDDEGGGEEDTEAFDIATLQNPDGANGFLPRKDIKPELQFPMRPGARPVANSVDVDD
FIKTRISDADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESVTTDSDLDYDYLQSWGPRF
RKLADLYGTKDSEAEDNS
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaaggaaggactcggacggaagatgtggctgctgtgtctgagcgccctgatgtgcggc
gtgtcatcgggcgtgtcgtcgggcctggaccggacccaccggcgccacatggggctgcac
cggcaccggggcgagcggggcaaggagggccaggtgctgcagcgctccaaacgcggctgg
gtctggaaccagttcttcgtcatcgaggagtacacgggaccggaccccgtgctggtcgga
cggctccactctgacgtggactctggcaccgggtacatcaagtacattctctcgggggag
ggtgcggggaccatcttcgttatcgacgacaagacgggcaacatccacgccaccaagacg
ctggaccgcgaggagcaggcgcagtacaccctgacggcccaggccgtggaccgcgacacc
aacaagcccctggagcccccctccgagttcatcgtcaaggtgcaggacatcaacgacaac
ccgcccgagttcctccacgggccctactacgccagggtgcccgagatgtccaacgtgggt
acatctgtgatgacggtgacggcgtcggacgcagacgaccccacctacgggaacagcgca
cggctggtgtacagcatcctgcagggccagccttacttctctgtggagccccagacaggc
gtgatccgcacggcgctgcccaacatggacagagaggcccggcaggagtatgacgtggtc
atccaggccaaggacatgggcgggcacatgggcggcctgtccggcaccacggaggtgaaa
atcacgctgaccgacgtcaacgacaaccctcccaaattccctcagagcgtgtacacgatg
ggtgtgtccgaggacaaggtcccgggggaagaggtggggaggatgaaggccaaggacctg
gacatgggcgagaacggcatggtggagtaccgcttcctggagggcgacggcatgagcgtg
cttgagatcagcaaagattccgaaacacaggaggccgtcatcaagctgaaaaaggttgtg
gattatgaaaagaagaagacgtacacggtgaaggtggaggcctctaacccccacgtggac
ccccgcttcatggcttgggggccttacaaggacacggccaccgtgaaggtgagcgtggag
gacgccgacgaggcccccgtcttcacggagaccagctacggcttcgaggtggaggagaac
gcgcccgaggggaccgtggttggccgcgtgcacgccagagacacggacacagccaacaat
cccgtcagatatatgattccccgctacacagacctgggccagttcttcagcatcactccc
gaggatggcgtcatcaaaacctctcgtccgctggaccgcgagacccaggcctggcacaac
attagcgtcagcgccacggagatcggaggtcaccaccaggatgccaaagtgcgagtaaac
attaaagtcaaagatgtgaacgacaacccgccagagttcgccaccaataatgaagtcctt
gtttgtgagaacgtggtaccaggaaaactaattgaaacggtcagtgccattgacaaggat
gaaatggcccaccgacagtacttccatttcagcctgccgccggaggtggccaacaaccac
aacttcactctgaaggacaacaaagatagcacagccagcatctacgtcatgcgcaagggc
ttcagccgaatgacccaggacatgtacttcctgcccatcgagatcaacgacaacggggtg
cctcctatgagcagcacgcagaccctgatcatccgcgtgtgcagctgcgacagcaaagag
accatcctgtcctgcaacgtggagcccttcatcctgcccgccggcctgagcactggggcg
ctcatcgccatcctggcctgcatcgtcatcctgctggcgatcgtggtgttgtttgtggct
ctgcgacggcagaagaaagagcctctcatcatgtacgaggaggaagacatccgcgagaac
atcatcacgtacgacgacgagggcggcggcgaggaggacaccgaggccttcgacatcgcc
actctgcagaaccccgacggagccaacggcttcctgccgcgcaaggacatcaagcccgag
ctgcagtttcccatgaggcctggcgcgcgacctgtggcgaacagcgtggacgtggacgac
ttcatcaagacgcgtatctcagacgcggacaacgacccgacggcgccgccctacgactcc
atccagatctacggctacgagggccggggctcagtagccggctccctcagctcgctggag
tcggtcacgacagactccgacctggactacgactacctccagagctgggggccgcgcttc
aggaagctggctgatctgtatggcaccaaagactccgaggctgaagacaactcttaa

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