Clupea harengus (Atlantic herring): 105897825
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Entry
105897825 CDS
T09045
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105897825 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105897825 (rad54b)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105897825 (rad54b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
105897825
NCBI-ProteinID:
XP_031431560
Ensembl:
ENSCHAG00000011693
UniProt:
A0A6P8G677
LinkDB
All DBs
Position
11:12191908..12208225
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AA seq
916 aa
AA seq
DB search
MRRSGAPSQLQGNMTKRMRFVPPGAQRLPPGRSPTTPENSPLPLQPKPTLTNKVSTVQMP
VSGRVCESRVSGALARVLSVVPVSEKTTDTSSEGEENTHTHVTDEESVENTLPPQPQARQ
SQPISTSPTERYFSVMWCKASNRKHKRWEGDAVLVARGRSVVLKDMEGKDISRGSGYKVL
ELESLAEGETLKVSGKEIEVMGVISVEDYATGRCFQEVSTVTSAVPALEATVARATAKAF
SRPSLKGGVTKPREVQREIQPRHNPNAPGALVMPRPPANHQWLWNKGGLQVVDVVMDSHL
TNHLRPHQREGVIFLYECIMGMRLSGRCGAILADEMGLGKTLQCVSLLWMLLRQGPYGGK
PAITSALVVAPGSLVKNWGAEFNKWLGRERLRVYMVDQDHRVEDYVASPVCPVMVVSYEM
VLRTASLLQKLDFGLLICDEGHRLKNTHIKTTSALHTLSCSRRIILTGTPVQNDLQEYYS
IVEFVNPGVLGSAAAYRKIYEEPIIRSRQPTCTQEERSLGEERATELSRLTGVFTLRRTQ
EIIGQYLPGRVEWTLFCRPTPLQTSLYTHLLSTRAVRACLNASVPHLGTHSPHLACISAL
KKLCNHPGLLYNTMKESTEGSVCEGLSAELFPEAYSSGRFSTDESGKLLVLCDLLAAIQH
FNSTDKVVLVSNYTQTLDVLQDVCAHLGYTCCRLDGSTPVAKRQSLVESFNKPSSAHFLF
LLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQRKTVHIYRLLTTGTIEE
RIYQRQVCKQGLSGAVVDLGKGADHISFSSEELRDLFTFEPKTTCLTHHLLGCHCAGDGA
IPSLPEEETTVGGRACQLGRRADSVSAPQRVSMSELMQCGHYSGDKQSYGDAYLDHAHSH
ITYAFQSMSINMQHST
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcggtcaggagctcccagtcagctgcaaggcaatatgactaaaaggatgcgattt
gtgcctcctggggcgcagcggcttcctcctggtcgaagccctaccactcctgaaaacagt
ccactgcccctgcagcccaagcctacgctcaccaacaaagtcagcacggtgcagatgccg
gtcagtgggagggtatgtgagtctcgggtgtcaggagctttggcacgggtgctcagcgtg
gttccagtctctgagaagaccacagatacatcctctgagggagaagagaatacacacact
catgtcacggatgaggagagcgtggagaacacactgcctccccaacctcaggcccgccag
agccaacccatcagcacatcacctacagagcggtacttcagcgtcatgtggtgtaaagcg
tcaaacaggaaacataagcgctgggaaggcgatgccgttctggttgcaagggggcggagt
gttgtgctgaaggacatggaggggaaggatattagtcgaggttctggttacaaagtttta
gagctggagagtctggctgaaggtgaaaccttgaaggtttctgggaaggagattgaggtc
atgggggtcatctctgtggaggactatgccacgggtcgttgcttccaagaagtctcgaca
gtaacctctgcagtgcccgcgctcgaggcgactgtcgccagggcaacagcaaaagccttc
tctcgcccaagtctgaagggtggagtcacaaaaccacgagaagtacagagagagatacaa
ccccgccataacccaaatgcaccaggcgctttagttatgccacggcctccagccaatcac
cagtggctttggaacaaaggtggtcttcaggtggtggatgttgtgatggattctcatctg
accaatcatctgagaccgcatcagagagagggtgtgatctttctctatgagtgcattatg
ggaatgagactgtcggggcgctgtggtgccatcctggcggatgagatgggcctggggaag
actctgcagtgtgtgagcttgctgtggatgctgctgaggcagggtccgtacggagggaag
cctgccatcaccagtgcccttgtggtcgcccccggcagtctggtcaagaactggggggca
gagttcaataagtggctgggacgagaacgactccgagtctacatggtggatcaggatcac
cgtgtggaggattatgtggcgtctccggtgtgtccggtgatggtggtcagttatgagatg
gtgctgcgcacggcaagcttattgcagaagctggattttggcctgctcatctgtgacgag
ggccaccggctgaaaaacacacacattaaaaccaccagcgctcttcacacactttcctgc
tccaggagaatcatactgacggggacccctgtgcaaaatgaccttcaagagtattactcc
atagttgagtttgtgaatccaggcgttctgggatctgcagcggcatacaggaagatttat
gaagagccaatcattcgctcccgtcagcctacctgcactcaggaggagcgctctctggga
gaggagcgtgcgacggagctgtctcgactgacaggggtgttcaccctgaggagaacacag
gagatcattggccagtacctccctggccgcgtggagtggacgctgttctgccggccgact
ccgctgcagaccagcctgtacacacacctgctgagcacacgggcagtgcgggcctgcctc
aacgcctccgtcccacacctcggcacacacagccctcacttggcctgcatcagcgccctc
aagaagctctgcaaccacccaggactgctctataacactatgaaggagagcactgagggt
tctgtgtgtgagggcctgtcagcagagctcttccctgaagcctacagcagtggcaggttt
agcacggacgagtcagggaaactcctggtgctgtgtgacctcttggcagctatacagcac
ttcaactccacagacaaggtggtgttggtctctaactacacccagactctcgacgtgctt
caggatgtttgtgctcatctcggatacacctgctgtcgtctggacggcagcacccctgtt
gccaagcgacagagccttgtggaatctttcaacaagccgagctccgcccacttcctcttc
ctgctcagctccaaagcaggaggggtgggccttaacctggtgggcgcctcccaccttgtg
ttgtacgatatcgactggaatcctgccaacgacattcaggcaatggcacgtgtgtggaga
gatggtcaaaggaaaactgttcacatctacagacttctgaccacaggcacgattgaggag
aggatctaccaaaggcaggtgtgtaagcagggtttgtctggtgcagtagttgacctagga
aaaggggccgatcacatcagcttctcttctgaggagctgcgcgaccttttcacctttgaa
cccaagacaacctgcctcacacaccacctcctgggctgccactgtgcaggggatggagcg
ataccatctttaccagaggaggagaccacagtgggtggaagggcatgtcagctgggtcgt
cgtgccgacagcgtgagcgctccccagcgggttagcatgtctgagctcatgcagtgcgga
cactactcaggagacaagcagtcgtatggagatgcttacctagaccacgcccactcacac
atcacctatgctttccagagtatgagcattaacatgcaacactcaacgtag
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