Clupea harengus (Atlantic herring): 105897840
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Entry
105897840 CDS
T09045
Symbol
krt18b
Name
(RefSeq) keratin, type I cytoskeletal 18b
KO
K07604
type I keratin, acidic
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105897840 (krt18b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105897840 (krt18b)
04147 Exosome [BR:
char04147
]
105897840 (krt18b)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
105897840 (krt18b)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
105897840 (krt18b)
Exosomal proteins of other body fluids (saliva and urine)
105897840 (krt18b)
Exosomal proteins of colorectal cancer cells
105897840 (krt18b)
Exosomal proteins of melanoma cells
105897840 (krt18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
HXXSHH
DUF5327
CD99L2
GOLD_2
PTH2
Motif
Other DBs
NCBI-GeneID:
105897840
NCBI-ProteinID:
XP_012680273
Ensembl:
ENSCHAG00000017985
UniProt:
A0A6P3VSV6
LinkDB
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Position
5:complement(21764444..21769859)
Genome browser
AA seq
468 aa
AA seq
DB search
MPLSCVALTLCSPARATLSAFLSFFTHSAHFSSTMNYRSERMSSVHSAPAYRAASIYGGA
GGYGARISSSSSSSLRSAAPGGITASSAFTQRNSAGASLQGGVGAALGNERGQMQNLNER
LATYLDKVRSLEQANAKLEAQIREALEKSGPETKDYSRYNAILDDLRKQVFDMIVDNARL
VLQVDNARLATDDFRVKYESELSIRQSVEGDIAGLKKVIDDTNLGRMNIEGEIESVKEEL
SFLQKNHENEVSDLMGHISQSGVQVDVDAPKGQDLAQVMDSMRANYEKMALKNVEELKMW
HENQMSEVQVQVSQNTEALQGAQMEKNDQRRQIQTLEIELASQQSLKSSLDDTLRSTELR
CNGEMEKYNDVIRQLEAELGHIKSKVTEQGQDYEALLNMKMKLEAEIATYRHLLDGEDTM
PWSQQPQQPQQPQQPQQPKQPKQPKQPKQPKSKFNLTDALGELENQEE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcctgtgtcgctcttactctctgcagcccagctagagcaactctctcagcc
ttcctctcattcttcacgcattctgcccatttctcctccaccatgaactacagatcagag
cgcatgtcttccgtgcattcagccccagcttaccgtgctgccagcatttatggcggggca
gggggctacggcgcgcggatctcctcgtcctcctcatcgagcctccgttctgcggccccg
ggcgggatcaccgcgtcctcggccttcacccagaggaactcggcgggggcgtccctccag
gggggtgtgggggcggcgctggggaacgagaggggccagatgcagaacctgaacgagcgc
ctggcgacctacctggataaggtgcgcagtctagagcaggccaatgccaagctggaggcc
cagatcagggaggcgctggagaagagtgggccggagaccaaagactacagccgctacaat
gccatcctggacgacctcaggaagcaggtgtttgacatgattgtggataatgctcgcctg
gtgctgcaggtagacaatgccagacttgctactgatgacttcagagtcaagtatgaatct
gagctgtccattcgtcagtctgtggagggagacattgctgggctgaagaaggtgattgac
gacacaaatctcggccgcatgaacatcgagggtgagattgagtctgtgaaagaggagctg
tccttcctacagaagaaccatgagaacgaagtttcagacctgatgggtcacatctcccag
tcaggagtgcaggtggatgtggatgctcctaagggacaggacctcgctcaggtcatggat
tcgatgagggccaactatgagaagatggctctgaagaatgttgaagagctcaagatgtgg
catgagaaccagatgtcggaggtgcaggttcaggtgtctcagaacacagaggccttgcag
ggagcacagatggagaagaatgaccagaggaggcaaatacagaccctggagatagaattg
gcatcccaacagagcctgaaatcatctcttgacgacacgctgcgcagcacagagctacgc
tgtaacggtgagatggagaagtacaacgacgtcatccgacagctggaggcagagcttggg
catataaagtccaaggtcacagagcagggccaggactacgaggccctcctgaacatgaag
atgaagctggaggctgagatcgccacctaccgccacctgctggacggggaagacaccatg
ccatggtcccagcagccccaacagccccaacagccccaacagccccaacagcccaagcag
cccaagcaacccaagcaacccaagcaacccaaatccaagttcaatttgacagatgctctg
ggggagctggaaaatcaggaggagtga
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