Clupea harengus (Atlantic herring): 105897908
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Entry
105897908 CDS
T09045
Name
(RefSeq) citrate synthase, mitochondrial
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00020
Citrate cycle (TCA cycle)
char00630
Glyoxylate and dicarboxylate metabolism
char01100
Metabolic pathways
char01200
Carbon metabolism
char01210
2-Oxocarboxylic acid metabolism
char01230
Biosynthesis of amino acids
Module
char_M00009
Citrate cycle (TCA cycle, Krebs cycle)
char_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
105897908
00630 Glyoxylate and dicarboxylate metabolism
105897908
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
105897908
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
PAS_3
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
105897908
NCBI-ProteinID:
XP_012680351
Ensembl:
ENSCHAG00000002098
UniProt:
A0A6P3VSS1
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Position
5:21482761..21495223
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AA seq
468 aa
AA seq
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MSLLSVSRLAPKILNSKSAACVFVAARNASSATNLKDVLTDLVPKEQSRIKNFKQQYGKT
NIGQITVDMVYGGMRGMKGLVYETSVLDPDEGIRFRGYSIPECQQLLPKAPGGAEPLPEG
LFWLLVTGQVPSEEQVNWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQFSAAVTALNSE
SSFARAYSEGVNKAKYWEFVYEDSMDLIAKLPCVAAKIYRNLYREGSSIGAIDSSLDWSH
NFSNMLGYSETQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAG
PLHGLANQEVLVWLTALQKEMGGEVSDEAMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYT
CQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN
YYTVLFGVSRALGVLAQLIWSRALGFPLERPKSMSSDGLMQLVGAKSG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtccctactgtctgtaagcaggcttgcgccgaagatcctgaattctaagagtgcagct
tgtgtctttgtggcagcaagaaatgcttcttcagcaacgaacctgaaggatgtcctgaca
gacctcgttcctaaagaacagagtcgtatcaagaacttcaaacagcagtatggcaaaacc
aacatcggccagattacagtcgacatggtgtatggtggcatgagaggaatgaagggtctg
gtgtatgagacgtcagtgctggacccagacgagggtatccgtttccgtggctacagcatt
ccagaatgccagcagctgctacccaaagcgcctgggggggcggagccactgcctgagggc
ctcttctggcttctggtgaccggacaggtgccctccgaagaacaggtaaactgggtgtct
aaggagtgggcaaagcgtgccgccctgccctcccacgtggtcaccatgctggacaacttc
ccaaccaacctgcaccccatgtcccagttcagcgccgccgtcacggccctgaacagcgag
agcagcttcgcacgcgcctactccgagggagtgaacaaggccaagtactgggagtttgtg
tatgaggactccatggacctgattgccaagctgccgtgcgtggcggctaagatctaccgc
aacctgtaccgcgagggcagcagcatcggcgccatcgactcttccttggactggtcccac
aacttctccaacatgctgggctacagcgagacccagttcactgagctcatgcgcctctac
ctcaccatccacagtgaccatgaaggagggaacgtcagtgcccacaccagccacctggtg
ggcagtgctctctctgacccctacctgtccttcagcgcagccatgaatggccttgcagga
cctctgcacggcctcgccaaccaggaggtgctggtgtggctgactgcactgcagaaggag
atgggtggtgaggtgtccgatgaagcgatgagggattacatctggaacacactcaagtca
ggaagggtggtaccagggtacgggcacgcagtgctgaggaagacggatccacggtacacg
tgccagcgcgagtttgccctcaaacacctgcccaatgatcccatgttcaagcttgtggca
cagctctacaagatcgtgcccaacgtactgctggagcagggcaaggccaagaacccctgg
cccaacgtggacgcccacagcggggtcctgctgcagtactacggcatgactgagatgaac
tactacacggtgctgttcggcgtgtcccgcgccctgggggtcttggcccagctgatctgg
agcagagccctgggcttccccctggagcgccccaaatccatgagctccgatggacttatg
caactggtcggagccaagtctggctag
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