Clupea harengus (Atlantic herring): 105897936
Help
Entry
105897936 CDS
T09045
Symbol
usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105897936 (usp49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105897936 (usp49)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105897936 (usp49)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105897936 (usp49)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105897936 (usp49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
105897936
NCBI-ProteinID:
XP_012680385
Ensembl:
ENSCHAG00000025418
UniProt:
A0A6P8FKD6
LinkDB
All DBs
Position
5
Genome browser
AA seq
685 aa
AA seq
DB search
MDRCKHVGRLRLGQDHSTLNPQKWLCADCGTSESVWACLKCAHVACGRDLHDHALHHFQG
SCHPLAMEVRELDVFCFACGDYVLNDNAEGDLKLLRGALSTIRSPNRRSLRSSAAAAGVE
GGAWMEAEGMLRPPSQVALWYRRKVLLGRMLGQWRRQWQEEEQKRNHKLEQERQEQRERR
EVKRRLIGELVISVGPPRKSARLLTQAPRPILALVPIKFRDPPERLPQASPPAAAQRPSA
LSLRNGNTQSPKPRRYHASLATRRRRLAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECF
LTLDLCETEELLAKTKTSQGVRGVIVGSAGALGCPLGQGGGGGAGTGGGGAGGGTGGVQG
EARSPAAGSNKESRSSSRQRMSLCHELHTLFRVMWSGRCSLVSPFAMLHSVWNLIPAFRG
YDQQDAQEFLCELLDKVQQELESNGSKRRILMPITQRKLSKQVLKVLNTIFHGQLLSQVT
CLSCKHKSNTVEPFWDLSLEFPERYHSGQKTSGSLGLKSCSLVEMLAKFTETEALEGRIY
ACNHCNKKRRKTSHKPLILTEACKQLLIYRLPQVLRLHLKRFRWSGRNHREKIGVHVAFD
QVLKIQPYCCRDSATGLHREGFTYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDS
VMNVCTVEEVCNTQAYILFYTQRSA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctgcaagcacgtgggccgcctgcgcctgggacaggaccactcaacgctaaat
ccacagaaatggctctgcgcggactgtggcaccagcgagtcggtgtgggcgtgcctgaaa
tgcgcgcacgtggcctgcgggcgcgacctgcacgaccacgctctccaccacttccagggc
tcgtgccacccgctggccatggaggtccgggagctggatgtcttctgcttcgcctgcggg
gactacgtgctcaacgacaatgccgagggtgacctgaagctgctgcgcggggcgctgtcc
accatccgcagcccaaacaggcgctcgctgcggtcctctgcggcagcggcgggggtagag
ggaggcgcatggatggaggcggaggggatgctgcggccgccctcacaggtggccctgtgg
taccgcaggaaggtgctgctagggaggatgctggggcagtggagacggcagtggcaggag
gaggaacagaagcgcaaccacaagctggagcaggagcggcaggagcagcgggaacggcgc
gaggtgaagcggaggctcattggagagctggtcatcagcgttgggccgcccagaaagagc
gcgcggctgctcacgcaggcgccgcggcccatcctcgccctcgtgccaatcaagttccgg
gacccgcctgagcgcctgccgcaggcctcaccacccgctgccgcgcagcgaccctcagca
ctgtcactcaggaacggcaacacccagtcacccaaaccgcggcggtaccacgcctccctg
gccacacggcgccggaggctggcgcccggggtgacgggcttgcgcaacctaggcaacact
tgctacatgaactcgatcctgcaggtgctgagccacctgcagaagttccgcgagtgcttc
ctcacgctggacctttgcgagacggaggagctgctggccaaaaccaaaacctcgcagggt
gtcaggggtgtcattgtgggcagtgcgggagcgctggggtgccccctgggccagggtggg
ggaggaggcgcaggcacaggcggaggaggggcaggaggtgggacaggaggggtgcagggc
gaggccaggagtccggctgcgggcagcaacaaggagtctcgctcgtcctcgcgccagcgc
atgtcgctgtgccacgagctgcacacactgttcagggtcatgtggtccggccgctgttcg
ctggtgtcgccctttgccatgctgcactcggtgtggaacctgatcccggcgttccgcggc
tacgaccagcaggacgcacaggagttcctatgcgagctgctggacaaggtgcagcaggag
ctggagtccaacggcagcaagcgccgcatccttatgcccatcacccagcggaagctctcc
aagcaggtgcttaaggtgctcaacaccatcttccacggccagctgctcagccaggtgacg
tgtctttcctgcaagcacaagtccaacacggtagagcctttctgggacctgtccctggag
ttcccagagcgctaccacagtgggcagaagacttctggctctttgggcctcaagagctgc
tccctcgtagagatgctggccaagttcacggagaccgaggcgctggagggacgcatctac
gcctgcaaccattgcaacaagaagagacggaagacatctcacaagccactgattctcaca
gaggcctgcaagcagcttttgatctaccgcttgcctcaggtgctacggttacacctcaaa
cgcttccggtggtcgggaagaaaccaccgggagaaaatcggggtgcacgtggcgtttgac
caggtcctgaaaatccagccctactgctgcagagactctgccacgggcctccaccgagag
ggcttcacctatgacctttctgccgtcgtgatgcatcatgggaaaggctttggctcagga
cactatacagcgtattgctacaactctgagggtggtttctgggttcactgtaatgactcg
gtgatgaatgtgtgcactgtggaggaggtgtgcaatactcaggcctacatcctgttctac
acccagcgctcagcatga
DBGET
integrated database retrieval system
