Clupea harengus (Atlantic herring): 105897951
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Entry
105897951 CDS
T09045
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105897951 (ccdc174)
03041 Spliceosome [BR:
char03041
]
105897951 (ccdc174)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105897951 (ccdc174)
Spliceosome [BR:
char03041
]
Complex C
Other components
EJC/TREX
105897951 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
105897951
NCBI-ProteinID:
XP_012680402
UniProt:
A0A6P3VSX0
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Position
5:complement(21822310..21827238)
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AA seq
444 aa
AA seq
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MDKKKQFKVTASSLVDLKAELYRKQQEFQQDKLTQHGGTSTAGSTARPKLKKPSIWSKQN
EGVTARAQRDVEISAEEENNLEKSKKKLEEKARLYEQMTKGDFPDEETEGLFLVDFTQKI
IDQRRDAHANTRDEEELDQQIPVPPPQNPDEEWVEYVDALGRSRKCLRKDLPDFQKMDQD
LQKNRLGSGDKTLLSEDMRREIQREEWEAEEEESMKRPVGPIHYENIREQEARELGVGYF
AFANDEEQRRKQRDTLDMLRDQTTDQRSKRERLKEKRKALLEARLAKVRMRKTKKGKLDG
SEEDSGAAVQEDEEKEEEVPEMPPVPKVDVEIQERKDTKPGVPHVREWDRGKEFMWDQWV
SGRRDERDTEFAPPSAYFSGQNRAENQNKAKLSFKWAGTQTHSSQHTRAPTAQQSSSQTT
PPPPRSEQGHPQSLDDMLSFYKNS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaagaagcagttcaaagtgacagcctcctcgctggtggacctgaaggcagag
ctttacaggaaacagcaggagtttcaacaggataagctcacccagcatggaggtacttct
actgctgggtccaccgccagacccaaacttaagaaacccagcatctggagcaaacagaat
gaaggtgtgactgcacgtgctcagagggatgtggaaatcagtgcagaggaagagaataat
ctggaaaaatcaaaaaagaaactggaggagaaagctcgtctctatgagcagatgaccaaa
ggagattttccagatgaggagacggaggggcttttcttggtggacttcacccagaagatc
atcgaccagaggagggacgcacacgcaaacaccagggatgaagaagagttggaccaacag
attccagttccacccccgcagaaccctgatgaagaatgggtagagtatgtcgatgcactg
gggagatcacggaaatgtttgaggaaagacctgccagatttccagaagatggatcaggat
ttgcagaaaaataggttgggtagcggagataagactctgctctcagaagacatgcggaga
gagattcagagagaggagtgggaagcagaggaggaggagagcatgaagagacccgtgggg
cccattcactatgagaacatcagagaacaggaggccagagagctgggtgttggctacttt
gcgtttgcaaatgatgaggaacagcgacggaaacagagagatacactggacatgctcaga
gatcagaccacagaccagcgcagtaagagggagcgactgaaggagaagaggaaagctctg
ctggaggctcgactggccaaagtgaggatgaggaagacgaagaaaggcaaattggacgga
tccgaggaggattcaggtgctgctgtgcaagaggacgaggagaaggaggaagaggttcct
gagatgccgccagtgccgaaggtggatgtggagattcaggagaggaaggacaccaaacct
ggagttcctcacgtcagagagtgggacagagggaaagagtttatgtgggaccagtgggtc
agcggtcgccgtgacgagagggacactgagtttgctccaccatctgcatacttcagtggt
cagaaccgggccgagaaccagaacaaagccaaactctccttcaagtgggctgggacacaa
acacactcatctcagcacacacgcgcacccacggcccagcagtcatcgagtcaaacaaca
ccacctcctcctcggtctgagcagggccacccccagagtctggacgacatgctctctttc
tacaagaactcttaa
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