Clupea harengus (Atlantic herring): 105898001
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Entry
105898001 CDS
T09045
Symbol
mta1
Name
(RefSeq) metastasis-associated protein MTA1
KO
K11660
metastasis-associated protein MTA
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105898001 (mta1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898001 (mta1)
03036 Chromosome and associated proteins [BR:
char03036
]
105898001 (mta1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105898001 (mta1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
105898001 (mta1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
Myb_DNA-binding
GATA
Collagen
Mod_r
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
105898001
NCBI-ProteinID:
XP_031436789
Ensembl:
ENSCHAG00000010641
UniProt:
A0A6P8GBX5
LinkDB
All DBs
Position
14:complement(7606409..7637559)
Genome browser
AA seq
691 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPLLIRRIEELNKTANGNVEAKVVCFYRRRDISGTLIALAD
KHAREMEEEMENPEILDLPEKQKHQLRHRELFLSRQLESLPATHIRGKCCVTLLNETEAL
KSYLDREDAFFYSLVYDPQQKTLLADKGEIRVGNKYQADITDFLAEGEEDDRDLTKLEEK
VWDPSSLITEKQIDQFLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDT
LHKNGYDMTRAIAALVPQGGPVLCRDEMEEWSASEANLFEEALEKYGKDFADIQQDFLPW
KSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYNKPNPNQLSSNSVKLAGL
VNGSGAAAAGGAAGAAVAVAAAAAAAAAAAAAAGAAAAAAAAAAAGIAAGTPGIPGVAAG
TPGVPGLPGVPGIPGVPGVPGVPGAPGQPAVLGRACESCFNTNSYQWYSWGPPNMQCRLC
ATCWTYWKKYGGLKMPTRLDGERPGPNRNNPNAHNMPVRHSGSPKFAAKTRQAFYLHTTQ
LTRASRRACQDLLRSHFLGRHPYNPVNAAAVKAESVVRLPDVPKKLLPLKPLVRKPLESV
VRYLEAHPWAPKPEVQRSATISTSSLTPIKSSPILNNGSPTILGKRNYEQHNGLEGTKPK
QHTPQWDIMSKRVCEPTRNVAPLQDQVHELD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaacatgtatcgggttggagattatgtatattttgaaaactcctccagtaac
cccctactcatcaggcgaatagaagagctgaacaagaccgcgaatgggaatgtggaggcc
aaggtggtgtgtttctacaggcgcagggacatctccggcacactgattgccttggctgac
aaacatgcacgagagatggaggaggagatggagaaccctgagatcctggacctgcccgag
aagcagaagcaccagctccgtcaccgagagctcttcctctctcgccagcttgagtcactg
cctgccacacacatcagggggaagtgctgtgtcacactcctaaatgagacggaggcgctt
aaatcctacctggaccgggaggatgccttcttctactccctggtgtatgatccccagcag
aagaccctgctggccgataaaggggagatccgcgttggaaacaagtatcaggcagacatc
acagacttcctggcagagggggaagaggacgacagagaccttaccaaactggaggagaag
gtctgggaccccagcagtttgatcacagagaaacagattgaccagtttttagtggtggca
cggtctgtgggcacgttcgcgagggccctggactgtagcagctccgtgcggcagcccagc
cttcacatgagcgcagcggctgcctccagagatatcacactgttccatgccatggacacg
ctgcataagaacggttatgacatgacacgggccatcgcggcgctggtgccccagggtggg
ccggtgctgtgccgggacgagatggaggagtggagcgcctccgaggccaacctcttcgag
gaggctctggagaaatacggcaaagacttcgccgacatccagcaggactttcttccctgg
aagtccttgaccagtattattgagtattactacatgtggaagaccacggacagatatgta
cagcagaaacggttaaaagcagcagaggccgagagcaagctgaagcaggtctacatcccc
aactataacaagcccaaccctaaccagctgagctccaacagtgtgaagctggccggcctt
gtgaacggaagcggggcagcggccgccgggggcgcagccggagcagcagtcgcagtcgca
gccgcagcagcagcagcagcagcagcagcagccgcagcaggagcagccgcagcagcagcc
gcagcagccgctgcaggaatcgcagcaggaaccccaggaatcccaggagtcgcagcagga
accccaggagttccaggacttccaggagttccaggaatcccaggagttccaggagttcca
ggcgttccaggagccccgggccagccagcagtgctgggccgtgcctgcgagagctgcttt
aacaccaactcgtatcagtggtactcgtggggtcctcccaacatgcagtgtcggctgtgc
gccacctgctggacatactggaagaaatatggcggcctgaagatgcccacgcgcctggac
ggggagaggccgggacccaaccgcaacaacccgaatgctcacaacatgccagttcgacac
agcggcagccccaagtttgcggcgaagacgaggcaggccttctacctgcacacgacccag
ctgacccgggcgtcccgccgcgcctgccaggacctgctgcgctcccacttcctgggccga
cacccctacaacccggtcaacgccgccgccgtcaaggctgagagcgtggtgcggttgcca
gatgttcccaaaaagctgctgccgctcaagccgttggtgaggaagcctctggagtccgtg
gttcgatacctagaggcccacccgtgggctcccaagcctgaggtccagcgcagtgccacc
atctccaccagcagcctgacgcccatcaagtcctcgcccatcctgaacaacggctcgccc
accatcctgggcaaacgcaactacgagcagcacaacggcctggagggcaccaagcccaaa
caacacaccccccagtgggacatcatgtccaagcgtgtgtgtgagccgaccaggaacgtc
gcccccttgcaggatcaggtccacgaactggactga
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