Clupea harengus (Atlantic herring): 105898011
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Entry
105898011 CDS
T09045
Symbol
nkx2.1
Name
(RefSeq) homeobox protein Nkx-2.1
KO
K09342
homeobox protein Nkx-2.1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898011 (nkx2.1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
105898011 (nkx2.1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105898011
NCBI-ProteinID:
XP_012680469
Ensembl:
ENSCHAG00000007682
UniProt:
A0A6P3VT55
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Position
14:complement(7350480..7352990)
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AA seq
345 aa
AA seq
DB search
MSMSPKHTTPFSVSDILSPLEESYKKVSMESNNLGAPLGSYRQQQVSQATMQQHHMGHNG
TVPAAYHMTAAGVSQLSHSAMGGYCNGNLGNMSDLPPYQDGMRGSTTATSWYGANPDPRF
STISRFMGSSSGMNMGSMGSLSSLADVGKSMGSLSSTPRRKRRVLFSQAQVYELERRFKQ
QKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKVSQQQMQQDSSCQQQQQSP
RRVAVPVLVKDGKPCQGSGHTPTTTVPTHHQQGGNIMIMSNNASGMGQHQNQQVGSAGQS
PDLTHHSTSPPSLQTQVAGLSHLNASSSEYGAALPCSALLYGRTW
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagccctaagcatacgactcctttttctgtttccgatatcttgagtcctctt
gaggagagctacaagaaagtaagtatggagagtaacaatttgggggctcctctggggtcg
taccggcagcagcaggtctcacaggcgactatgcagcagcaccacatgggtcacaatgga
acggtacccgcagcttaccacatgaccgctgcgggggtgtcccaactttcgcactcggcg
atggggggctactgtaacggaaacctcgggaatatgagcgaccttccgccataccaggac
ggcatgagaggcagcacaacggccaccagctggtatggagccaatccagacccacgtttc
tccacaatctcacggttcatgggctcgtcttcgggcatgaacatgggcagtatgggcagt
cttagctcgctggcagatgtgggcaagagcatgggttccctctccagcaccccgcggcgg
aagaggcgcgtgttgttctcccaagcccaagtctacgagctggagcggcgctttaagcag
cagaagtatctctctgcccccgaacgagagcacctggccagtatgatccatttgacgccc
acccaagtgaaaatctggtttcagaaccacaggtataagatgaagcgacaagccaaagac
aaggtgtcccagcagcagatgcagcaggacagctcctgtcagcagcagcaacagtcgcca
cggcgggtggccgtgccagtgttggtaaaagacggcaaaccgtgtcaaggcagcgggcac
acaccaaccaccaccgtgccaacacaccaccagcaaggtggtaacatcatgatcatgtcc
aacaatgcctcaggcatgggtcaacaccagaaccagcaagtgggaagcgctgggcagtcc
cccgacctgacacatcattccactagcccaccttccctgcagacacaggtggccggtctg
tcgcacctcaacgcctccagctctgagtatggagcggccttgccctgttcggccctgctc
tacggcaggacgtggtga
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