Clupea harengus (Atlantic herring): 105898058
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Entry
105898058 CDS
T09045
Symbol
slitrk5b
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105898058 (slitrk5b)
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Gene cluster
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRRNT
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
105898058
NCBI-ProteinID:
XP_012680512
UniProt:
A0A6P8EJT7
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Position
2:complement(30331598..30336231)
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AA seq
861 aa
AA seq
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MHFWIATTLLAVTSLSFVEMLDRYGEICRELCDCEEKDGSLSVSCENRGITSLAEITPLH
FSTYHLLLTGNLLKKLSFNDFVYYEGATILHLGNNDISEVETGAFNGLQGLRRLHLNNNK
IDSLREDFFVGLEQLEYLQLDYNYISHIDASAFSKLHHLEVLILNDNLLSSLPTNVFQYV
PLTHLDLRGNQLKLLPYNGLLEHMNKIVELQLEENPWNCSCELIPLKAWLESISYTALVG
DVVCETPFRLHGRDLDEVSKQELCPRRAIAEYEMHAEPARSSEAYFQTTPASVAASVTSS
GILRSLRPTKGSRQSGKLRSKPTSRPSPNKQNYGPMVSYQTKSPVPLDCPTACNCNLQIS
DLGLNVNCQERKIESIADLNPKPYNPKKMYLTGNYIPMVHRSDFTEAVGLDLLHLGNNRI
SIIHDRSFRDLTNLRRLYLNGNLIERLTEDMFYGLESLQFLYLEYNVIREIMPGTFEQVP
SLQLLFLNNNLLKTLPEGVFNGLTLSRLNLRNNHFRNLPVGGVLDQLKSLVQIDLYENPW
DCSCSIVEMKLWLEQLNTGTVVNSVICESPARLSGEDMRYIHASHLCPNNSILQGSAIPP
SEESLPGSTITLESSLDYDTPYSTVPLSVLILALLMIFIMSVFITAGLFAVVRRRRKKTQ
NVQATSISADLSSFNSLYSNRSATKVKSSAGHLYEYIPPPGDRAAKNSTYAINEHSTSEG
FRDFDDLNGAFTPNSDDELASNARSSEYSDSTLDPLNKPTPLQDNFFYRDILARDKQLPY
RGSQHCKHSGHSSTQYNQDYDVRPQFLQTDNRVPQTMVYCTAPATVYVEPNRSEYWELKA
KLHFEPDYLEVHEKRTTFTQF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttggattgctaccacactgcttgctgtcacatctctgagttttgttgagatg
cttgacagatatggtgagatctgtagagaactgtgtgactgtgaagagaaagatgggagt
ctgagtgtcagttgtgaaaacagaggaataaccagtctagcagagataactccgctgcac
ttttccacatatcatctactgctcactggaaacctccttaagaaactgtctttcaatgac
tttgtgtattatgagggggccaccattttgcatttaggaaacaatgacatatcagaagtg
gaaacaggggcatttaatggactgcaaggattaagaagactacatcttaacaataacaaa
attgattctttaagggaggacttttttgttggtctagaacaactggaatatcttcagctt
gactataactacatttctcatattgatgccagtgccttcagcaaactgcatcatctggag
gttctcattttgaacgacaacttgctgtcttccctgccaactaatgtgtttcaatatgtc
cccttaacccaccttgacctacggggaaatcagctgaaactgcttccatacaatggtctg
ttagaacacatgaacaagattgtggagttgcagttagaggaaaacccttggaattgttca
tgtgaactcatccccctcaaggcttggctggagagtatttcctacacggctctggtggga
gatgtggtctgcgagaccccgttccggctccatgggagggatctggatgaggtttctaag
caggagttgtgcccccggagagcgattgcggagtatgagatgcatgcagagcctgcccgg
agcagtgaagcgtactttcaaaccacgccagcttctgtggcagcatctgtaacatcatca
ggaatcttacggtctttaaggcctactaagggctctcgtcagtcaggcaaattgagatct
aaacccacctctcgaccatctcctaataaacaaaactatggaccgatggtgtcctatcaa
accaaatctcctgtgcctttggactgtcctactgcatgcaattgcaaccttcaaatatca
gacctaggtctgaatgtgaactgccaagagagaaaaattgagagcattgctgatctaaat
cctaaaccttacaatcctaaaaagatgtatctgactgggaattacatcccaatggtgcat
agatctgatttcaccgaggccgtgggattggatttgcttcacttggggaacaatcgaatc
tccatcatccatgaccgttcttttcgggatttaacaaatttgcgaaggctttacttgaac
gggaatttaatagagcgcctgacagaggacatgttctatgggttagagagtcttcagttc
ctgtatttagaatacaacgtcattagggaaatcatgccgggtacctttgagcaagtccca
agtctccagctgctctttctcaataacaatcttctcaaaaccctaccggagggagtgttt
aatggattaacactctctcgacttaacctgcgtaataatcacttccgtaatctgccggtt
ggtggtgtgctggatcagttgaagtcactggtgcagatagatctctatgagaacccgtgg
gattgctcgtgtagcatcgtggagatgaagctctggttggagcagctcaacactggtacc
gtagtgaacagtgtgatctgcgagtccccagcgagactctctggagaggatatgagatac
atccatgcttctcatctttgcccaaacaactcaatccttcaaggttcagcgatcccaccg
tctgaagaatctttacctggcagcacaatcaccttggagtcatctctggattatgacacc
ccatatagcacagtccccctctccgtgctcatattagccctgctcatgatcttcatcatg
tctgtgttcatcacggcaggactgtttgccgtcgtgaggcggaggcggaagaagacccag
aatgtacaagcaacatccataagtgcagacctgagctctttcaacagtttgtacagcaac
agatcggcgaccaaagtcaaatcctctgcgggacatttgtacgagtacattccccctcct
ggtgatcgcgcagctaaaaactccacctacgccattaatgagcacagtacaagtgaggga
ttcagagactttgatgatctgaatggagcgttcactccaaattctgacgatgagttggca
agcaatgctagaagctctgagtacagcgatagcacccttgacccccttaacaaacctacc
cccctgcaagacaactttttttacagagacattttagcacgggacaagcagctaccttat
agaggtagtcaacattgtaagcacagtggtcattcttcaacccaatacaaccaagactac
gatgtcaggccacagtttctgcaaacagacaacagagtgccacagacaatggtgtactgc
acagcaccagcaaccgtttatgttgaacccaatagaagtgaatattgggagttgaaagcc
aagctccatttcgaaccagactaccttgaagtccacgagaaacggacaacattcacccag
ttttaa
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