Clupea harengus (Atlantic herring): 105898095
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Entry
105898095 CDS
T09045
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898095 (sox21b)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105898095 (sox21b)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105898095
NCBI-ProteinID:
XP_031416249
Ensembl:
ENSCHAG00000026784
UniProt:
A0A6P8EVK8
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All DBs
Position
2:30211192..30213566
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AA seq
243 aa
AA seq
DB search
MSKPLDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVPYNLGEHDALKVSCMPGGSLVDSL
MNHPDKAAAAAAAAAARVFFNPSMSTNPYSFFDLGSKMSELSPPFHYASPLGYPGATAFS
GTGTVGSGAHTHTHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEPYSAYA
AAL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacctttagatcacgttaagcgtccaatgaatgccttcatggtgtggtctagg
gctcagcgacgaaagatggctcaagaaaatcccaaaatgcacaactccgagattagtaaa
agactgggcgcggagtggaaacttctcactgagtcagagaaaaggccatttattgacgag
gcgaagcgtctgagggctatgcacatgaaagaacacccagactacaaatacagaccaagg
cggaagccaaagactttaatgaaaaaggacaagtttgctttccccgtgccctacaatctt
ggagaacacgacgcgttgaaggtgagctgtatgcccggtggatcactggtcgactcctta
atgaatcaccccgacaaagcagcggctgcggccgccgcggccgccgccagagtttttttc
aacccctcgatgtcaacaaacccctactcattttttgatctcgggtcgaaaatgtcagag
ctctcaccaccgtttcattatgcatcaccgctcgggtacccgggcgcaacagctttctcc
ggaacaggaactgtcggaagtggggcacacacccacactcatccatcgccgggcaacccg
ggctatatgattccctgtaactgcacggcttggccttcggctggtcttcaaccacccttg
gcttacattttactgcctggaatgggcaaacctcagctcgaaccttattctgcttacgcg
gctgcgttatga
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integrated database retrieval system