KEGG   Clupea harengus (Atlantic herring): 105898197
Entry
105898197         CDS       T09045                                 
Symbol
thrap3a
Name
(RefSeq) thyroid hormone receptor-associated protein 3 isoform X1
  KO
K13112  thyroid hormone receptor-associated protein 3
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105898197 (thrap3a)
Spliceosome [BR:char03041]
 Complex B
  Other components
   Complex B specific factors
    105898197 (thrap3a)
SSDB
Motif
Pfam: THRAP3_BCLAF1
Other DBs
NCBI-GeneID: 105898197
NCBI-ProteinID: XP_012680669
Ensembl: ENSCHAG00000017660
UniProt: A0A6P3VT94
LinkDB
Position
11:13530821..13552083
AA seq 992 aa
MSKTTRSASRSRSRSRSGSRSRSRSYSRSRSRSPSRPRKRRYSSRSRSRSRSHSPAHNRE
RNYPREYQNNREFRGFRGSRRPFFRGRGRGYFPRGRFQRGRGGNFNNYRNNNWQNYRQYP
QQQQQQQQQQQQQQQQQQHSHNSNHSPKRGRCRSPKKRSGSPHSRSYSDDSSRHSSSSSS
SGASSSKKRSGSHANKRRSKNVKEDNPTSKEIPKGAEGGGEQAEAEAEVGPGAGAGAGEE
VGSGGWQEVTELSSSSPKKSSPLSCGQGSSMPVSQKSPSPKGSNAPSNGTSIWRGTGCAA
STKSPPKKSPPKKSPTPVSTGFGFSSKESRGDEKAISTAFKKFLEEQKSRQASEFENGRE
DDAVVENNALREKGSGMSTGHIFEKGPNLSFSKFSNHNGKVAKERYSYDDFTIHASSNNY
SKGPPFHGDENGEDHHDEDDDDDDENEEEVVTSQHPMMEAKVEVEAPKRKGKASLSAREL
FDLAFFHASQDDGDLELLEEQLFPNRKQERAAAVAAALVRREMAGMLQGAAISTEKGPKA
RRMEKATSSLASTAPAQAPSQRPGENWGMDVLMGMRDKSPPRVTGKRGIDVNVRMDSLND
NMSSSNNLLESERHLTHPTKKQEQEVHTVFKRSQAAHVCRCSSDLFSQHIVTIVHNVKAQ
HFSSSGMTLNDRFAMYQRRAAEREITKARKSPEIHRRIDVSPSAFKKHAHLFEEMKDLGE
SSYKAKSKKNKGDSLDLRQDIERRKKYSSRDTESKRERGRDSGESTDSSRARSTEKTSKH
HKKHRKSKKKRERSRSSSSSSSHSNRGDDYSKEEAGFNKSRLGPPDHRGPMERGRGRGGF
QLRIRGRGWSRGNFQNKSNGNGPGMSVPVQIKSEDRDPEFTPKSRPYYLHDDREGERDKR
WVENRGRGRGSFVRSGGRFLFRKAAPSVTTTTATMTTTSTSIGSGNTNSRCSPKWTHNKF
KGSAEEGEVPDDDTDQDHKEDGNTGVALSSGQ
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgtcaaagactacgaggtctgcctccaggtctcgctcccgatcccgctcggggtcccgc
tccaggtcccgctcctattcccgctcccgcagtcgctcgccgtcacggcccaggaagcgg
cgctacagctccaggtctcgctcacgctcaagatcccattctccagcccacaaccgcgag
aggaattacccgcgggagtaccaaaacaacagagagttccggggcttccgaggctctcgg
cggcccttttttcgtggtcgaggacggggctatttcccccgcggccgcttccagagaggc
cgaggcggcaacttcaacaactaccggaacaacaactggcagaactaccgtcagtacccc
cagcagcagcagcagcagcagcagcaacagcaacagcagcagcagcagcagcagcacagc
cacaactccaaccacagtcccaagaggggacgctgtcgctccccaaagaagcggtccggc
agcccgcactcccgcagctactccgatgactcctcccgccactcctcctcttcctcctcc
tctggagcctcctcctctaaaaagagatcaggctcccacgccaacaagcgcaggagcaag
aatgtgaaggaggacaaccccacctccaaggagatcccgaaaggagcggagggaggtggg
gagcaggcggaggcagaggctgaggttggcccaggggcaggggcaggggcaggtgaggag
gtgggctctggtggctggcaggaggtgacagagctttcttcttctagtcccaagaagtcc
agcccactatcatgtggtcagggatcatcaatgcctgttagccagaaaagcccctctccc
aaaggttctaatgcccccagcaatggcacctccatctggcggggtactggttgtgcagcc
tccactaaaagccccccaaagaaaagccctccaaagaaaagccccacacctgtctcgact
ggctttggcttctcgtccaaagagagcagaggagatgaaaaagccatctccactgccttt
aaaaagttccttgaggaacagaagagcagacaggccagtgagtttgagaatggcagggag
gatgatgccgttgtggagaacaatgctctgagagagaaaggcagtggcatgtccacaggt
cacatctttgaaaaggggcctaaccttagcttctccaagttctccaatcacaacggcaaa
gtagccaaagaacggtactcgtacgacgacttcaccatccatgcctcatccaacaactac
tccaagggtcctccctttcatggggacgagaatggagaagatcatcatgatgaagatgat
gatgatgatgacgaaaacgaggaggaggtggtgacatctcaacatccaatgatggaggca
aaggttgaagtagaggcgccgaagcgcaaaggcaaggcctcgctgtcggcccgagagctg
tttgacctggccttcttccacgcctcccaggacgatggcgacctggagctgctggaagag
cagctgttcccaaaccgtaagcaggagcgggcggccgctgtcgccgcggcgctggtcagg
agggagatggcggggatgctgcagggagccgccatctccacagagaaagggcctaaggcc
aggaggatggagaaggccacctccagcctggcgtccactgccccagcccaggccccctcc
cagaggccgggggagaactggggcatggacgtgctaatgggcatgagagataagtcccca
cccagggtgactgggaaaaggggaatagatgtgaatgtgcgaatggactctctcaacgac
aacatgtcgagctcaaacaatcttcttgagagcgagagacacctgacgcaccccactaaa
aagcaggagcaggaggtccacactgtcttcaagcgctctcaggctgcccatgtctgccgc
tgttcctctgacctcttctctcaacacatcgtcaccattgtccacaacgtcaaagcgcaa
cacttctcctcctctggaatgactctaaatgacagattcgccatgtaccagagaagagct
gcagagagggaaataaccaaggcaagaaaaagcccagaaatacacaggagaattgatgtt
tctcccagtgcttttaagaagcacgcgcacctgtttgaggagatgaaagacctcggggag
agcagctacaaggccaaaagcaaaaaaaacaaaggcgactcactggatctgcgacaggac
atagagcgccgcaaaaaatactccagtcgcgacactgagagcaaacgcgagcgagggaga
gactcaggagagtccacagactcgagccgagcgagatccacagagaagacatccaagcac
cacaagaaacacaggaaaagcaagaagaagcgggaacgctctcgttcttcatcctcctcc
tcctctcattccaacaggggggatgactactcaaaggaggaggcaggcttcaacaagtcc
cgcctaggaccccctgatcaccggggccccatggagagaggacggggccgaggaggcttt
cagctcagaataagaggaaggggatggagcaggggaaatttccagaacaaaagtaatgga
aatggccctggcatgagtgtgccagtgcagatcaagagcgaggacagggatccagaattc
acccccaagagcaggccgtactacctgcacgacgatagggaaggagagagggacaagcgg
tgggtggagaaccgcggacgcggtcgtggcagcttcgtccgcagcggcggtcggttcctg
ttccgcaaggctgccccctccgtcaccaccaccaccgccaccatgaccaccaccagcacc
agcattggttctggcaacaccaacagccgctgcagccccaaatggactcacaacaagttc
aaaggcagcgcagaggagggggaggtgcctgacgacgacacagaccaggaccacaaagaa
gacggcaacactggggtggcactcagctctggccagtga

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