Clupea harengus (Atlantic herring): 105898198
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Entry
105898198 CDS
T09045
Symbol
vtna
Name
(RefSeq) vitronectin a isoform X1
KO
K06251
vitronectin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105898198 (vtna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105898198 (vtna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105898198 (vtna)
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105898198 (vtna)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105898198 (vtna)
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105898198 (vtna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
105898198
NCBI-ProteinID:
XP_012680666
Ensembl:
ENSCHAG00000014781
UniProt:
A0A6P3VTF9
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All DBs
Position
9:complement(6638616..6641898)
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AA seq
630 aa
AA seq
DB search
MRPGLILLALAVLSATCHSQESCVNRCEYGFDARKTCQCDSMCRYYKSCCSDYETACRMH
IRGDTFVFAEDDDEQMNTTEGTGRAQSRERQPAPFSTPMAATEAGTEAASTAGTTPRPTH
DSPESAEHILATVVPPITTDDPNTTIVAAPRTTDVPDINHITAPSTTEVSDINHITTPST
TEAPSITATVPGTTDMFTSTDHDRTSPSAAAITEIPPTEQETPTPEPKPTHALDPDANAC
SGRAFDAFLQLKNGTIFAFRGEYFFGLDDKALLPGYPRLIKDVWGISGPIDAAFTRINCQ
GKTYIFKGNKYWRFEDEVLDDDYPRDLTVGFEKIPDDIDAAFSTPAHGHHGKEKVYFFKG
DQYYQYEFKHQPTHEECIQMSLRSPSVPFLQYTNMYYDSWDGLYSTLFEGFPGHHHGPHF
INKDWKGLKAPIDGVMAGRLYIAPRPPGRQYPNRNNNQQQWGQDWDQQWVPRRRQNRSPQ
WQPMAQWGANIGREFAERGMNIGREFAERGMNIGRESMGRGRDDRLRDMEDRRRDEADRR
RDEEDRQRDRWRDDHRRRYDYDYRHDPREDYFLDMLRKSQPVQSVYFFKGDKYYRVDLQS
KRVDPASPPYPRSIGKYWLGCKEKPGAEKK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaggtcttattctactggcactggcggtgctttctgctacatgtcactcacaa
gagtcatgtgtgaaccgctgtgagtatggctttgatgctcggaagacttgccagtgtgac
tccatgtgcagatactacaagagctgctgttcggattacgagaccgcctgtcgtatgcac
atccgtggagacacatttgtgtttgctgaggatgacgatgagcagatgaacaccactgag
ggcacagggagggcccaatcacgagagaggcaaccagcccccttcagcactcccatggct
gccacagaagcaggaacagaagcagccagcacagcaggcaccacgccacgccccacacac
gactcccctgagagtgcagaacatattcttgccaccgttgttcctccaattaccactgat
gatccaaataccactattgtagctgcgccaagaaccaccgatgttccagatatcaatcat
ataactgcgccaagcaccaccgaagtttcagatatcaatcatataactacgccaagcacc
actgaggctccaagtatcactgccacggtgccaggtaccactgacatgtttaccagcact
gatcatgaccgaaccagtccctctgctgctgccatcacagagatcccacctactgagcaa
gaaactccaactcctgagccaaagccaacacatgcgctagatccggatgcgaatgcttgt
agtggcagagcctttgatgccttcttgcaactaaagaatggcacaatctttgcattcaga
ggggagtacttctttgggctggatgacaaagcactgctgccaggctaccccagactcatc
aaggatgtgtggggaatatctggacccatagatgctgccttcacccgcatcaactgccag
ggcaaaacatacatcttcaagggaaataaatactggcggtttgaagatgaggtgttggat
gatgactacccgcgagacctcactgtagggtttgagaagatacctgatgatatagatgct
gccttttctacccctgcacatggccaccatggcaaagagaaagtctactttttcaaaggc
gatcaatattaccagtatgagttcaaacatcagccaactcacgaggaatgcatacagatg
tccttaagatctccctctgtgcctttccttcagtacaccaacatgtactatgacagctgg
gatgggctttacagcaccctctttgaaggattcccagggcaccaccatggtccccacttc
attaacaaggactggaaagggctcaaagccccgatcgatggcgtgatggcggggaggctc
tatatcgccccgcgacccccaggaaggcagtaccccaacaggaacaacaaccagcagcag
tgggggcaggactgggaccagcagtgggtgccccggcgcaggcagaaccgctccccgcag
tggcagcccatggcccagtggggggcgaacatcgggagggagttcgctgagcgagggatg
aacatcgggagggagttcgctgagcgagggatgaacatcgggagggagtccatggggagg
ggccgcgatgaccgcttgcgagacatggaggaccgtcggcgagacgaagcggatcgtcgg
cgagacgaagaggatcgtcagagggacaggtggagagacgaccacaggagacgatatgac
tatgattaccgacacgaccctcgggaggactacttcctcgacatgttgcggaagagtcag
ccggtacaaagtgtgtacttcttcaaaggagataagtactacagagtggatctgcagtct
aaaagagttgacccagcaagtcctccatacccaaggtccattggcaaatactggcttggg
tgtaaggagaaacctggtgcagagaagaagtga
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