Clupea harengus (Atlantic herring): 105898283
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Entry
105898283 CDS
T09045
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105898283 (hps3)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
105898283 (hps3)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
105898283
NCBI-ProteinID:
XP_031431432
Ensembl:
ENSCHAG00000026110
UniProt:
A0A6P8G727
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Position
10:complement(15998242..16008568)
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AA seq
1072 aa
AA seq
DB search
MVHVYNCHPFASQHIVPTEQEPGPVCCGGDALFVVSAGGCKIEAYNMQEEGCPLICRFAT
MGTVHSILHSQTGDYLVTIEEKNKATYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSASLR
GIPKEQMEIIEIPLFETPLCMACCPLTGDLLVGCAKTLVLFTLRRQALNDRLSVLDFERL
LILHIPGWTPSQVSLCAGYVAMQADLEVLVFQLQKPQIGKEQKKKEEEEEDQELQLHALV
PKDMISQKDRLNVSDSGMDDNEMKREPDDFIMFPKHLEMLGEQAKDCGVCVTLEWTGVES
ESRFDTGVTYILYRRFAPDFFQGNSVEDTCLHSLQLYPVLTSNQETAGEAKPPDPACVFC
FFSLPNTGYMYSIKGLVELVSAYQYPEKAQQAVLSSHFLHVITKNALQCFSVRCSAVAAR
AEDPYIDTTIKACPPFTMEVCALRIQLFIGLKALCHDRNHIVLLTAADVESKEDVERAAR
RSLESKDHKTLTGILLAVGIEPSSNPALESLLSKSFLDSHNWLMDTLRSAAGSSRKTSIT
KPKEPTESGHGWNLYVVNTVSSLALYREMVEYSKKYEVSDPFSLSCIHLLSEAHLLLRAS
LLDPLIEPTERTQIQQAFEENCAQLGDCYSRFDKRDCHQALPYYKMSGLSVTEVIQRNVA
TANSPPDYGKGFIFFLRHSLYEEDMEELSQEAANTVLDIFSVAEPAQLPHVVSSPFMLKC
DPAFALAHLDRLEAAGAPSVTLTLATASLALRMGDMQLYQQQMERHAEMLQVYGFIEEPK
LLLLGRGKAVVPTPLARHLHQSQEGLLVAAAVALHENSKVKLEEADLFFQELCKEAPEAP
DTPQLLVDFWEALLVASSQEAVIQELLFRLTSVYIDRITRRQQPSARPLKTADDLMNSCV
HYGQLYPWVGILTPVQMRSTLAYQEDLQKLQSLLCGPTLDVSSILPLLEQLPDSDNAGLS
VHVLCATRLGHTESSIERLLDRCPQAIISFAHDELKNDKMALWWQKLFPELCERTRAAGD
ENSILLAALRETLVVVAMELNPLEFLELLPDDGTAHFFLPHLLECSQRNLMA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgtttataactgccatccgtttgcatcccaacacattgttcccaccgagcaa
gagcccgggccggtttgttgcggcggagatgctcttttcgtcgtctcagccggaggatgt
aagatcgaagcgtacaacatgcaagaggaaggatgccctctcatctgtcgatttgcgaca
atgggaacagtccatagcatattacacagtcaaacaggagactatcttgttaccatcgag
gaaaaaaataaggccacttacctccgcgcttataccaactggcgttaccaagcggccgag
aaaacgcgagtgggtgtccggttgcttggccatttcctacgaggttctgcgtcgctccga
ggcattcccaaggagcagatggagataatcgaaatcccgcttttcgagacccctctctgt
atggcctgttgccctctcacgggagacctgctagtgggctgtgccaaaaccttggttctg
ttcacgttacgacgacaggcgctaaacgaccgtctctctgtgctggatttcgagcgtctc
ctcatcctccatatcccgggatggacgccctcgcaggtgtccctgtgcgccggctacgtg
gccatgcaggctgatctggaggtcctggtgtttcagctgcagaagccccaaattgggaag
gagcagaagaagaaggaggaggaggaggaagaccaggagctacaactgcatgccctggtc
ccaaaagacatgatttcccaaaaggacaggctcaatgtcagcgactctggtatggatgac
aatgagatgaaaagggagccagatgacttcatcatgttcccaaagcatctggagatgctg
ggggaacaggccaaggactgtggcgtatgtgttactctggagtggactggtgtggagagt
gagtcccgcttcgacacaggcgttacctacatcttatataggcgctttgctcctgatttc
ttccaaggcaacagtgtggaggatacctgtctgcattccctgcagctctacccagtgctc
actagtaaccaggagactgccggtgaggccaaaccccctgatcctgcctgcgtgttctgc
ttcttctccctgcccaacactggctacatgtacagtatcaaaggcttagtggagctggtc
tcggcctaccagtacccggagaaggcccagcaggctgtgctcagtagccatttcctccat
gtcatcaccaaaaatgcccttcagtgtttctctgtgcgctgtagtgcggtggccgccagg
gctgaggacccctacatcgacaccaccattaaggcttgtcctcccttcaccatggaggtt
tgtgcattgcgcatccagctcttcattggtctaaaggccctttgccatgacaggaaccac
attgtccttctgaccgcagcagatgtggagagcaaagaggatgtggagagagcggccagg
agaagcctcgaatcaaaagatcacaaaactctaacggggattttgctagcggtaggtata
gagccgtccagcaaccctgctttggagagccttctatccaagtccttccttgattcacac
aactggctcatggacacattgagatcagcagccggaagctctaggaagacctccatcacc
aagcctaaggagccgactgagagtggccatgggtggaacctgtatgtggttaacacagtc
tcaagtctcgccctctacagagagatggtggagtacagtaagaagtatgaggtgtcagac
cccttctctctgagctgcatccacctcctgagtgaggctcacctgctactgcgtgcctcg
ctgctagaccccctcatcgagcccacagagaggacacagatccagcaggccttcgaggag
aactgtgcccagctcggggactgctacagcaggtttgacaagagggactgccaccaggcg
cttccatactacaaaatgtccgggctgtcggttaccgaagtgatccagaggaacgtggcc
acggcaaactcccctccggactatggcaaaggcttcatcttcttcctcaggcactctctc
tatgaggaagacatggaggagcttagtcaggaggctgccaacacagtgctggatatcttc
agcgtggccgagcctgcccagctgccccatgtggtgagcagccccttcatgctgaagtgc
gacccggccttcgccctggcccacctggaccggctggaggccgctggagccccctctgtc
acgctcaccctggccacggcctccttggcgctgcgcatgggggacatgcagctgtaccaa
cagcagatggagcgccatgcggagatgctgcaggtgtatggcttcatcgaggagcccaag
ctgctgctgctgggccgggggaaggctgtggtgcccacgccgctggcccgccaccttcac
cagtcccaggagggcctgttggtggcagctgccgtggccctgcatgagaacagcaaagtc
aaactggaggaggcagacctcttcttccaggagctgtgcaaagaggccccagaggctcct
gacaccccacagctgctggtggacttctgggaggccctgctggtggcctcctctcaggag
gcagtcattcaggagctgttgttccgcctcacctccgtctacatcgaccgcatcacccgc
cgccagcagcccagcgccaggccgctcaagaccgcagacgacctgatgaactcttgtgtc
cattacggacagctctacccctgggtgggcattctgacacccgtgcaaatgcggagcaca
ctggcctaccaggaggaccttcagaagcttcagtcgctgttgtgtggccccacgttggac
gtgtcctccatcctgcctctcctggagcagctgccggactctgacaacgcgggactgagt
gtgcacgtgctgtgtgccacgcggctcggacacaccgagagctccatcgagcggctgctg
gaccgttgcccgcaggccatcatctcattcgcccacgacgagctaaagaatgataaaatg
gctttgtggtggcagaagctgtttcctgagctgtgtgagagaaccagagcagcgggagac
gagaacagcatcttactggctgccctgagagaaacgcttgtcgtggttgccatggagctg
aatcccttggaattcctggaattgttgccggatgacggcactgcacacttcttcctgccc
cacctgctggagtgtagccagaggaacctgatggcatga
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