Clupea harengus (Atlantic herring): 105898311
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Entry
105898311 CDS
T09045
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X2
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105898311 (farp2)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FERM_C
FERM_M
FA
FERM_N
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_20
Motif
Other DBs
NCBI-GeneID:
105898311
NCBI-ProteinID:
XP_012680786
Ensembl:
ENSCHAG00000022316
UniProt:
A0A6P3VTM0
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All DBs
Position
10:complement(15561997..15609960)
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AA seq
1058 aa
AA seq
DB search
MGDIEGTYRSLQTPGTRLGAQFNAAISTLEPGQSLSTAMGSGAKGHGRGLQLRVLGLDDS
QEFYDLESKADGQALLSEAYRRCNLIESDYFGLEFQNMQMNWVWLEPTKLVVRQVRRPMN
TLFRLSVKFFPPDPGQLQEEYTRYLFSLQMKRDLMEGRLICTENTAALLASHLVQSEIGD
YDDVADREYLKVNKLLPYQERVQEKIMELHRRHLGQTPAESDFQVLEIARKLEMFGVRFH
PAADREGTKINLSVAHMGLQVFQGNTKINTFNWSKIRKLSFKRKRFLIKLHPDVHGPHQD
TLEFLMASRDQCKIFWKNCVEHHSFFRLHDQPQPKAKAILFSRGSSFRYSGRTQKQLVEY
VRDSGARRTPYQRRNSKIRMSARSLASDFPKQSLSFNDSLRLPGSPGSATVSFHSLPIGG
GSPLRQEPQTQLQPHQSLPAFQQSQQFQHHQQQQPARPPSPPKEDPVNAATSPPSHYAFQ
GSTTMDSPQLSPFSSKGPLCISPSFQMSTLSLPGQAPSPLQSPILSEVGTGRLDEDEEGR
RKRYPTDKAYFIAKEILTTERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIY
EFHRGFLKEIDQRLALWEGRSNAHVKGDYQRIGDVMLRNMCSLKEFTSYLQKHDEVLTEL
EKATKRLKKLETVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILERLCHHYTPEQRDHD
DCKEALKEVAEIAAQLQSSLIRLENFQKLTELQRDLIGIENLTAPGREFIREGCLYKLTK
KGLQQRMFFLFSDMLLYTSKGVTATNQFKVHGQLPLHGMIVEESENEWSVPHCFTIYSAQ
RTIVVAASSKVEMNKWIEDLNMAINMAKKSQEKSDLFMESGLSDRSNRSSDEVSLEQESE
DDMNSSRSSLDKQTHHRANTTMHVCWHRNTSVSMSDHSLAVENQLSGYLLRKFKNSNGWQ
KLWVVFTNFCLFFYKTHQDDFPLASLPLLGYTVSTPGENDSIHKEYVFKLQFKSHVYFFR
AESEYTFERWMEVIKSAASSTGRMSLLIPKGTTEMNGN
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacattgagggcacctaccgctccctgcaaactcccggcaccaggttgggggca
cagttcaacgcggccattagcaccctggaacccggccagagtctgagtaccgccatgggt
agcggggccaaaggtcatggccgagggctgcagctgcgagtgctcggcctggacgactcc
caggagttctacgacctggagtctaaggctgatggacaggccctcctgtctgaagcatac
cgccggtgcaatctcattgagagcgattactttggcctggagtttcagaacatgcagatg
aactgggtatggttggagccaacaaagcttgtcgtcagacaagtgagaaggcccatgaac
acactcttcagactctcggttaagttcttccctccagaccctggccagctacaggaagag
tacaccaggtacctgttctctctgcagatgaagagggatctgatggaagggaggctcatc
tgtacagagaacactgctgcccttcttgcctcccacctggtgcagtcggagatcggtgac
tatgacgacgtggcggaccgagagtacctgaaggtgaacaagctgctgccttatcaggag
cgcgtgcaggagaagatcatggaactgcaccggcgacaccttggtcagaccccagcagag
tcggacttccaggtgctggagattgcgcggaagctggagatgtttggcgtgcggttccac
ccagcagccgaccgcgagggaaccaagatcaacctctccgtggctcacatgggcctgcag
gtgttccagggcaacacgaaaatcaacaccttcaactggtcaaagatccgcaagctgagc
ttcaagaggaaacggttcctcattaaactccatcctgatgttcatggccctcaccaggac
acgctggagttcctgatggccagcagggaccagtgtaagatcttctggaagaactgtgtg
gagcatcactccttcttccggctgcacgaccagccccagcccaaggccaaagccatcctc
ttcagccgaggatcctcttttagatacagcggtcgcactcagaagcagctggtggagtac
gtgagagacagcggagcgcgaaggactccatatcaaaggaggaacagcaagatccgcatg
tctgcccgctccctggcctctgattttccaaaacagagtctgtccttcaacgacagcctg
cggctccccggttcgcctggttcggccaccgtctccttccactccttgccgattggaggt
ggctctcccctacgccaggagccccagactcagctgcagccccaccagagcctgcctgcc
ttccaacagagccagcagttccagcaccaccagcagcagcagcctgcccggccccccagc
cccccgaaggaggacccggtcaacgccgccacctcacccccgtcccactacgccttccaa
ggttctaccaccatggacagcccccagctctcccccttcagctccaagggtccgctctgc
atatctccctccttccagatgtccacgctgagtctgcccggccaggcgccttctcccctg
cagagccccatcctaagcgaggtgggcactggcagactagacgaggatgaggagggcagg
aggaagagatatcccactgataaggcctacttcattgccaaagagattctgactacagag
aggacctacctgaaagacctggaggtcatcaccgtgtggttccgcagtgctgtgatcaag
gagaacgccatgcccgagggcctgatgactctgctcttctccaatatcgaccccatctac
gagttccaccgcggcttcctcaaggagatcgaccagaggctggctctctgggaagggcgc
tcaaacgcacacgtgaagggtgactaccagaggatcggggacgtgatgctgaggaacatg
tgttcattgaaggagttcaccagctacttgcagaagcacgacgaggtgctgaccgagttg
gagaaggccaccaagcgtctgaagaagctggagacggtctacaaggagtttgagctgcag
aaggtgtgctacctgcccctcaacaccttcctgctcaagcccatccagcgcctcatgcac
tacaagctcatcctggagcgcctgtgccatcactacacccccgagcaacgcgaccacgac
gactgcaaggaggcgctgaaggaggtggctgagatagctgcccagctccagagcagcctc
atccggctggagaacttccagaagcttacagagctgcagagagaccttattggcattgag
aacctcacagctcctggcagggagttcattcgtgaggggtgtctctacaagctcaccaag
aaaggcttgcaacagaggatgttcttcctgttctctgacatgctcctgtacaccagcaaa
ggggtgactgcaaccaaccagttcaaagtgcacggtcagctgcctctgcatggcatgatt
gttgaggagagtgagaacgagtggtcagtgcctcactgcttcaccatctactcagctcag
aggacaattgtggtggcggccagttccaaagtggagatgaacaagtggattgaggacctg
aacatggcgatcaacatggctaagaagtcccaggagaagtctgatctcttcatggagtct
ggtctctccgatcgctcgaacaggtcgtctgatgaggtgtctctggagcaggagtcggag
gatgacatgaactcctcccgtagctctctggataagcagacccatcaccgtgccaacacc
accatgcacgtgtgctggcaccgcaacaccagcgtgtccatgtctgaccacagcctggcc
gtggagaaccagctctctggctacctcttgaggaaattcaagaacagcaatggatggcag
aagctttgggtggtgttcaccaacttctgcctcttcttttataagacccaccaggatgac
ttcccactggccagtctcccgttgctaggctacacagtcagcacccctggggagaatgac
agcatccacaaagagtatgtcttcaagctgcagttcaagtcccatgtctactttttccgg
gctgagagcgagtacacttttgagaggtggatggaggtgatcaagagtgcagccagctcc
acgggcaggatgagcctcctgatccccaagggtacgacggagatgaacggaaactaa
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