Clupea harengus (Atlantic herring): 105898330
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Entry
105898330 CDS
T09045
Symbol
nr5a2
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2 isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898330 (nr5a2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105898330 (nr5a2)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
105898330 (nr5a2)
Nuclear receptors [BR:
char03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
105898330 (nr5a2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
FliG_M
Motif
Other DBs
NCBI-GeneID:
105898330
NCBI-ProteinID:
XP_012680809
Ensembl:
ENSCHAG00000018224
UniProt:
A0A6P3VTV8
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Position
10:14344502..14403437
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AA seq
541 aa
AA seq
DB search
MMSDSPKCDIGQESSQDDSPGGPSDGAQSSPQRSRAVMLPKVETEALGLARSHGERGHMP
GHMQAPQYKMMDYSYDEDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCI
ENQSCQIDKTQRKRCPYCRFQKCLTVGMKLEAVRADRMRGGRNKFGPMYKRDRALKQQKK
ALIRASGLKIEAMTQVMQSVPTDLTISSAIQNIHSVSKGLPLSHAALPPIDYDRSPFVTS
PVSMAMPPHAGSLQGHYQAAYGHFQSRTIKSEYPDPYTSSPESIMGYPYMDTYQSGSPPS
FPHLIVELLKCEPDEPQVQAKILAYLQQEQASRGKHEKLNTFGLMCKMADQTLFSIVEWA
RSSVFFRELKVDDQMKLLQNCWSELLILDHIFRQVLHAKDSSILLVTGQQVDYAVIASQA
GATLNNLMSHAQDLVSKLRALQFDQREFVCLKFLVLFSLDVKNLENFHLVESVQEQVNAA
LLDYVMCNYPQQTDKFGQLLLRLPEIRAISLQAEEYLYYKHLNGDVPCNNLLIEMLHAKR
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatagcccaaagtgtgatattggacaagagagctcacaggacgattcacca
ggtggcccgtcagacggagcccagtcttcaccccagcggagccgagctgtcatgctaccc
aaagtggagacagaagctctgggactcgctcgatcgcatggggaacgggggcacatgcct
ggacatatgcaagcaccccagtataaaatgatggactattcctacgacgaagacctggat
gagatgtgtcctgtgtgcggggacaaggtttccggttaccactatgggctcctcacatgc
gagagctgcaagggcttcttcaagcgcacagtccagaacaacaagcgctacacgtgcatc
gagaaccagagctgtcagatcgacaagacccagcggaaacgctgcccctactgccgcttc
cagaagtgcctcacagtcggcatgaaactggaggccgtgagggcagaccgcatgcgaggc
ggccgcaacaagtttggccccatgtacaagcgggaccgggcgctgaagcagcagaagaaa
gctcttatccgcgccagcggcctgaagatcgaggccatgacacaggtgatgcagagcgtg
cctaccgacctcaccatctcctcagccatccagaacatccactccgtctccaagggcctg
ccgttaagccacgccgcgctgccgccaatcgactacgaccgcagccccttcgtcacgtcg
cccgtcagcatggccatgccgccacacgccggcagcctgcagggccactaccaggccgcc
tacggccacttccagagtcgcaccatcaagtccgagtaccccgacccgtacaccagctcg
cctgagtccatcatgggctacccgtacatggacacgtaccagagcggctcgccgcccagc
ttcccgcacctcatcgtggagctgctcaagtgcgagccagacgagccgcaggtgcaggcc
aagatcctggcctacctgcagcaggagcaggccagccggggcaagcacgagaagctcaac
accttcggcctcatgtgcaagatggccgaccagacgctcttctccattgtggagtgggca
cgcagcagcgtattcttcagagagttgaaggttgacgaccaaatgaagctcctgcagaac
tgctggagcgaactcctcatcctcgaccacatcttccggcaggttctccacgccaaggac
agctccattctcctggtgaccggccagcaggtggattatgctgtaattgcctcccaagcc
ggggccacccttaacaacctgatgagccatgcacaggatctggtgagcaagctgcgcgcc
ctgcagtttgaccagagggagttcgtctgcctcaagttcctggtgctgttcagcctggac
gtgaagaacctggagaacttccacctggtggagagtgtgcaggagcaggtgaacgcggcg
ctgctggattacgtcatgtgcaactacccgcagcagacggacaagtttggccagctcctg
ctccggctgccggagatccgcgccatcagcctgcaggccgaggagtacctctactacaag
cacctgaacggggacgtgccctgcaacaacctgctcatcgagatgctccatgccaagcgc
gcctga
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