KEGG   Clupea harengus (Atlantic herring): 105898462
Entry
105898462         CDS       T09045                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105898462 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105898462 (polb)
Enzymes [BR:char01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105898462 (polb)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105898462 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     105898462 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2 HHH_2 Cdd1
Other DBs
NCBI-GeneID: 105898462
NCBI-ProteinID: XP_031426045
Ensembl: ENSCHAG00000009325
UniProt: A0A6P8FRH4
LinkDB
Position
7:3295630..3301470
AA seq 338 aa
MSKRKAPQETLNEGITDFLIELANYERNVNRAVHKYNAYRKAAASISKYPNKIKSGTEAK
KLDGVGKTIAEKIDEFLTTGKLRKIEKIRGDETSSSINFLTRVTGIGPAAARKFFEDGVK
TLEDLKNIEHKLNHHQQIGLKYFEDFEKRIPRVEMQKMEVHILKELDVVDPVYIGTICGS
YRRGAESSGDIDILLTHPDYTSETEKQPKLLHAVVEHLESIGFITETLSKGDTKYMGVCQ
MQLKDDPEATEEYPHRRIDIRIIPKDQYFCGVLYFTGSDVFNKHMRTHALDMGFTLNEYT
IRPLGVTGMAGEPLLVDSEKDIFDYIQWKYREPKDRIE
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgagcaaaagaaaagcaccacaagaaactctgaatgagggaatcaccgactttctcatc
gagttggccaattacgaaagaaacgtgaatagggcggtccataaatacaatgcttacagg
aaagccgcggcttcaattagcaaataccccaataaaatcaaaagtggaacagaggctaag
aaattggacggagttggaaaaactatcgcagagaagattgacgagttcctgactacagga
aaactgcgtaaaatagagaagatccgcggtgatgaaaccagctcttcaatcaacttcctc
acgagagtcacaggcattgggccggctgctgcaaggaagttttttgaggacggcgtaaag
actttggaagatctgaagaatattgaacacaagctcaatcaccaccaacagattggcctg
aagtactttgaggactttgagaagcgtattcctcgtgtggagatgcagaagatggaggtc
catattctgaaggagctggatgtggtggaccctgtgtacattggcaccatctgtggaagc
tacaggagaggtgcagagtcgagtggtgatattgatatcctgctgacccacccggactac
acctccgagacagagaaacagcccaagctgctgcatgcagtggtggaacatctggagtcc
attggctttatcactgaaacactgtccaagggagacactaaatatatgggcgtgtgtcag
atgcagttaaaggatgatccagaagcaacagaggagtaccctcacagacgcattgacatc
aggatcattcctaaggatcagtatttctgtggagtgctgtacttcacaggcagcgacgtc
ttcaacaaacacatgaggacccacgcgctggacatgggcttcaccctcaatgagtacacc
atccgcccactaggggtcaccggtatggctggggagcccttgctggtggacagtgaaaag
gacatctttgactacatacagtggaaatacagagaacccaaggatcgcattgaataa

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