Clupea harengus (Atlantic herring): 105898462
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Entry
105898462 CDS
T09045
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105898462 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105898462 (polb)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105898462 (polb)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
105898462 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105898462 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
105898462
NCBI-ProteinID:
XP_031426045
Ensembl:
ENSCHAG00000009325
UniProt:
A0A6P8FRH4
LinkDB
All DBs
Position
7:3295630..3301470
Genome browser
AA seq
338 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLIELANYERNVNRAVHKYNAYRKAAASISKYPNKIKSGTEAK
KLDGVGKTIAEKIDEFLTTGKLRKIEKIRGDETSSSINFLTRVTGIGPAAARKFFEDGVK
TLEDLKNIEHKLNHHQQIGLKYFEDFEKRIPRVEMQKMEVHILKELDVVDPVYIGTICGS
YRRGAESSGDIDILLTHPDYTSETEKQPKLLHAVVEHLESIGFITETLSKGDTKYMGVCQ
MQLKDDPEATEEYPHRRIDIRIIPKDQYFCGVLYFTGSDVFNKHMRTHALDMGFTLNEYT
IRPLGVTGMAGEPLLVDSEKDIFDYIQWKYREPKDRIE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaagaaaagcaccacaagaaactctgaatgagggaatcaccgactttctcatc
gagttggccaattacgaaagaaacgtgaatagggcggtccataaatacaatgcttacagg
aaagccgcggcttcaattagcaaataccccaataaaatcaaaagtggaacagaggctaag
aaattggacggagttggaaaaactatcgcagagaagattgacgagttcctgactacagga
aaactgcgtaaaatagagaagatccgcggtgatgaaaccagctcttcaatcaacttcctc
acgagagtcacaggcattgggccggctgctgcaaggaagttttttgaggacggcgtaaag
actttggaagatctgaagaatattgaacacaagctcaatcaccaccaacagattggcctg
aagtactttgaggactttgagaagcgtattcctcgtgtggagatgcagaagatggaggtc
catattctgaaggagctggatgtggtggaccctgtgtacattggcaccatctgtggaagc
tacaggagaggtgcagagtcgagtggtgatattgatatcctgctgacccacccggactac
acctccgagacagagaaacagcccaagctgctgcatgcagtggtggaacatctggagtcc
attggctttatcactgaaacactgtccaagggagacactaaatatatgggcgtgtgtcag
atgcagttaaaggatgatccagaagcaacagaggagtaccctcacagacgcattgacatc
aggatcattcctaaggatcagtatttctgtggagtgctgtacttcacaggcagcgacgtc
ttcaacaaacacatgaggacccacgcgctggacatgggcttcaccctcaatgagtacacc
atccgcccactaggggtcaccggtatggctggggagcccttgctggtggacagtgaaaag
gacatctttgactacatacagtggaaatacagagaacccaaggatcgcattgaataa
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integrated database retrieval system