Clupea harengus (Atlantic herring): 105898466
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Entry
105898466 CDS
T09045
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecule (CAM) interaction
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
105898466 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105898466 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105898466 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105898466 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105898466 (cldn5a)
04147 Exosome [BR:
char04147
]
105898466 (cldn5a)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105898466 (cldn5a)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105898466 (cldn5a)
Exosomal proteins of colorectal cancer cells
105898466 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
105898466
NCBI-ProteinID:
XP_012680959
UniProt:
A0A6P3VTK9
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All DBs
Position
7:complement(3354945..3356750)
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AA seq
216 aa
AA seq
DB search
MASAGLEILGLGLCVIGSLLEMMACGLPMWKVTAFIEANIVVAQTIWDGLWMSCAVQSTG
QMQCKMHDSMLALGHDLQAARALTVISSVLGVIALMVVIPGAQCTNCIRADNVKARIVNV
GGILYIVSGIFVLVPLCWMANNIISDFYNPQVPTPKKREIGAALYIGWAATALLLCGGAI
LCCSCPSSGNSGYSVQYAPTTKRAAANGDYDKRNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgccggacttgagattttgggcttggggttatgcgtgatcgggagtctcctg
gagatgatggcctgcgggctgcccatgtggaaggtgacggcgttcatcgaggccaacatc
gtagtggcacagaccatctgggacgggctgtggatgtcgtgcgcggtgcaaagcaccgga
cagatgcagtgcaagatgcacgactccatgctcgcgctcggccacgacctgcaagctgcc
agggctctcaccgttatttcatccgtgctgggcgtcatcgcgctgatggtggtgataccg
ggagcccagtgcaccaactgcatccgcgcggataacgtaaaggcgcgcatagtgaatgtc
ggagggatactctacattgtgagcggcattttcgtgctcgtgcccctgtgttggatggcc
aacaacatcatctcggacttctacaacccgcaggtgcctacgcccaagaagcgcgagatt
ggcgctgcgctctatatcggatgggcggccacagcgctcctgctttgcggtggtgccata
ctttgctgttcatgtccatcctcgggaaactccggatactctgtgcagtacgctcccacg
acgaaacgggccgcagcaaacggggactacgacaaaaggaattacgtttaa
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