KEGG   Clupea harengus (Atlantic herring): 105898466
Entry
105898466         CDS       T09045                                 
Symbol
cldn5a
Name
(RefSeq) claudin 5a
  KO
K06087  claudin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03272  Virion - Hepatitis viruses
char04382  Cornified envelope formation
char04514  Cell adhesion molecule (CAM) interaction
char04530  Tight junction
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    105898466 (cldn5a)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    105898466 (cldn5a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105898466 (cldn5a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105898466 (cldn5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:char03037]
    105898466 (cldn5a)
   04147 Exosome [BR:char04147]
    105898466 (cldn5a)
Cilium and associated proteins [BR:char03037]
 Other cilia and associated proteins
  Stereociliary proteins
   105898466 (cldn5a)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   105898466 (cldn5a)
  Exosomal proteins of colorectal cancer cells
   105898466 (cldn5a)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like MFS_MOT1
Other DBs
NCBI-GeneID: 105898466
NCBI-ProteinID: XP_012680959
UniProt: A0A6P3VTK9
LinkDB
Position
7:complement(3354945..3356750)
AA seq 216 aa
MASAGLEILGLGLCVIGSLLEMMACGLPMWKVTAFIEANIVVAQTIWDGLWMSCAVQSTG
QMQCKMHDSMLALGHDLQAARALTVISSVLGVIALMVVIPGAQCTNCIRADNVKARIVNV
GGILYIVSGIFVLVPLCWMANNIISDFYNPQVPTPKKREIGAALYIGWAATALLLCGGAI
LCCSCPSSGNSGYSVQYAPTTKRAAANGDYDKRNYV
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcctctgccggacttgagattttgggcttggggttatgcgtgatcgggagtctcctg
gagatgatggcctgcgggctgcccatgtggaaggtgacggcgttcatcgaggccaacatc
gtagtggcacagaccatctgggacgggctgtggatgtcgtgcgcggtgcaaagcaccgga
cagatgcagtgcaagatgcacgactccatgctcgcgctcggccacgacctgcaagctgcc
agggctctcaccgttatttcatccgtgctgggcgtcatcgcgctgatggtggtgataccg
ggagcccagtgcaccaactgcatccgcgcggataacgtaaaggcgcgcatagtgaatgtc
ggagggatactctacattgtgagcggcattttcgtgctcgtgcccctgtgttggatggcc
aacaacatcatctcggacttctacaacccgcaggtgcctacgcccaagaagcgcgagatt
ggcgctgcgctctatatcggatgggcggccacagcgctcctgctttgcggtggtgccata
ctttgctgttcatgtccatcctcgggaaactccggatactctgtgcagtacgctcccacg
acgaaacgggccgcagcaaacggggactacgacaaaaggaattacgtttaa

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