Clupea harengus (Atlantic herring): 105898507
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Entry
105898507 CDS
T09045
Symbol
cpt1a2b
Name
(RefSeq) LOW QUALITY PROTEIN: carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00071
Fatty acid degradation
char01212
Fatty acid metabolism
char03320
PPAR signaling pathway
char04148
Efferocytosis
char04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
105898507 (cpt1a2b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105898507 (cpt1a2b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105898507 (cpt1a2b)
03320 PPAR signaling pathway
105898507 (cpt1a2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105898507 (cpt1a2b)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
105898507 (cpt1a2b)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105898507 (cpt1a2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
105898507
NCBI-ProteinID:
XP_031425708
Ensembl:
ENSCHAG00000000065
UniProt:
A0A6P8FB14
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Position
1:complement(18752002..18775600)
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AA seq
782 aa
AA seq
DB search
MAEAHQAVAFQFTITPEGVDLQLSYQALAHIYRSGLRSWKKRISRMRNSVIKGVYPASPS
SWLFVVIAILSTLYMQSDPSMGLIAKIQENLPLSLSLSSQGQTMLSALVFSTLLWLSLIL
TLRFCLKLLLSYHRWMFEQHGRISTATKVWVPLVRLLSGRKPLLYSYQTSLPHLPVPPIK
DTLERYLLSVRPIVDDEGFERLNKLAVEFERNLGNRLQRYLKLKALWSTNYVSDWWEEYI
YLRGRNPIMVNSNYYGMDFLYVTPTPIQAARAGNTITALLLYRRKVNREELKPSRVPAPX
YPLCAAQCERMFNTTRTPGEEFDVSAHWQDSEFVAVYHRGRYFRLWVYRAGRLLSPREIQ
FQIQRIMDDPSPPLTGEEKLGALTAGNRVPWAQVRKQYFSSGLNKRSLDCIEKAAFFVTL
DDQEEGMMGDDPKGNLDRYAKSILHGKCYDRWFDKSLTVVVYKNGKNGLNAEHSWADAPT
VAHLWEYALATDAFQLGYTTDGNCRGEVERSLPPPQRLAWEIPVEVEQQQAASLTVAQAL
ADDVDCHVFPFRDFGKGRIKKLKMSPDGFIQLALQLAYYRNRGGFCLTYEASMTRLFREG
RTETVRSCSNESCAFVQALEAGEPPEHCRNLFRLAVERHQNLYRLAMTGSGIDRHLFCLY
VVSKYLGVESPFLKEVLSEPWRLSTSQTPVQQMELFDLVNHPEYISLGGGFGPVADDGYG
VSYIIVGDHMINFHVSSKHSCSETDSHEFGVHISQALLDLLTVFSTEPKGTAEAPREDKK
RM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcccaccaggcggtggccttccagttcaccatcacaccggagggggtggac
ctgcagctgtcctaccaggctctggcacacatctaccgctctggcctgcgctcctggaag
aagagaatcagccgcatgagaaatagtgtgataaagggtgtctatcctgccagcccctcc
tcctggctgttcgttgtcatagcgatcctgagcaccttatacatgcagtcggacccctcc
atgggcctcatcgctaagatccaggagaacctgccactcagcctgtctctgagctcccag
ggccagaccatgttgtctgcactggtcttcagcacgctgctgtggctctcgctgatccta
acgttgcgtttctgcctcaagctgctgctctcctaccaccgctggatgttcgagcagcac
gggcgcatctccaccgccactaaagtctgggtgcctttggtcaggctgctgtctgggagg
aaaccactgctgtacagctatcagacgtctctcccacacctgccagtcccacctatcaaa
gacacactggagcggtacctgctctctgtgcgtcctattgtcgatgacgaagggtttgag
cgtttgaataagctggctgttgagtttgaaaggaatcttggaaaccgactgcagcgctac
ctcaagctcaaagctctgtggtccaccaattacgtgagcgactggtgggaggagtatatt
tacttaaggggccgtaaccctatcatggtgaacagtaattactatggcatggacttcttg
tacgtgacgcccacgccaatccaggcagcccgggcaggaaacaccatcactgcactgctg
ctctaccgccgcaaggtcaaccgggaggagctgaaacctagtagagttccagcaccgtaa
taccctctatgtgctgctcagtgtgagcgcatgtttaacaccacccggacaccaggagag
gagttcgatgtttctgcgcactggcaggacagtgagtttgtggcggtgtaccacagagga
cgctacttcagactgtgggtgtaccgcgcgggccggctcctgtcaccccgagagatccag
ttccagatacagcgcatcatggatgatccgtcgccacccctcaccggagaagagaaactc
ggggccctgacagcaggaaaccgggtgccgtgggcccaggtacggaagcagtacttcagc
tcgggcttgaacaagcgctcgctagactgcatcgagaaggccgcctttttcgtcacgctg
gacgaccaggaggagggcatgatgggggacgacccgaagggcaatctggaccgctacgcc
aagtccatcctgcatgggaaatgctacgacagatggtttgacaagtccttgacagtggtg
gtctataagaatggaaagaatggactgaacgcggagcactcctgggctgatgctcccacc
gtggctcacctttgggagtacgccctggccacagatgcctttcagcttggctacaccact
gatggaaactgcagaggagaggtggaacgctctctgccccctcctcagagactggcctgg
gaaattccagtagaggtggagcagcagcaggcggcctctctgactgtggcacaggccttg
gctgacgacgtcgactgccatgttttccccttccgggattttgggaaaggacggataaag
aagctgaagatgagtccagatggtttcattcagcttgccctgcagctggcctactacagg
aatagaggtgggttttgcctgacctacgaggcctcgatgacacggctcttccgtgagggc
cggacggaaacggtgcgctcgtgctctaatgagagctgtgcctttgtgcaagctctggaa
gcaggggagccaccagagcattgcaggaatctcttccgattggctgttgagaggcaccag
aacctgtaccgattggctatgaccggctctggtatcgatcgtcacctcttttgtctgtac
gtggtgtctaaatacctgggagtggagtcacccttcctcaaagaagtcctttccgagcct
tggcgcctgtctacctctcagaccccagtccagcaaatggagttgtttgatctggtgaac
caccccgagtacatctccctgggagggggctttgggcccgtggctgacgatggatatggc
gtgtcctacatcatcgtcggagaccacatgatcaacttccacgtctcgtccaagcactcc
tgttcagagacggactcccatgaatttggagtgcacattagccaggctctgcttgatctc
ctgaccgtgttctctacagaacccaaaggaacagcagaggcaccaagagaagataagaaa
cggatgtga
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