Clupea harengus (Atlantic herring): 105898596
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Entry
105898596 CDS
T09045
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105898596 (si:ch211-106h11.1)
Ion channels [BR:
char04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
105898596 (si:ch211-106h11.1)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_EndoS
LRR_9
Motif
Other DBs
NCBI-GeneID:
105898596
NCBI-ProteinID:
XP_031425657
UniProt:
A0A6P8FR79
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Position
1:24404283..24408918
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AA seq
796 aa
AA seq
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MDYQQYIYVSQVCYHEALPWFSRFFPYVALLQSLVLLASGCFWFHFPLTSSRIEHFLTIL
GKCCESPWTSRALSHTARLDSGQCRPTEEEKEEERLQVHLPHPVHPASFTRQSSLDSGTD
SPLLVRSDSASTAAPPSPCPSMLSRTSSLSSLSFIETVSPQPQLSRVIPDATRPTASLDR
SDGEQARALFERVRRFRAHCESSDIIYKVYLAQTIFKVLKVVLIVSYTTPLLGSISFNHI
CQPLTHALTGYQAFECTHALASVLHKLLVVYLCLVGLFGLLGLYTLSWIWHKSLRKYSFQ
CLHETGSMLDVPDLCNDLAFLLHMADQYDPLLAHRLSVFLSPVSETRLLEENLERRWGVE
RLRGMTTFDPQGRTQLQLVALSSLPPALFTLSQLEVLKLELITDAKLSAQISNMTSLRQV
DPGTLHLYHCTAAVEPGALLCLQERLEVLHLTFIQATDIPGWVYSLRGLQELHMTGHLGC
EGGVGRGWAVGNLRQLRHLRLLSLRDSLQRIPAELGEVAGSLMRLEIHNEGARLLVLTGL
RRVVGLTELQLQGCQLERLPSALLALTGLRSLDLQHNCLRTLEELLSLQHLRRLSSLRLA
HNRVLALPSSVGVLRRLELLDLAHNELQSLPPALFTLHRLRRLYLAGNLLEVLPAEVGAL
ALLLELDLSGNRLESLPAELCTNCLELRNLNVSYNSLGSLPPDLGSLSQLSLLDLRGNSL
EQLPAELGCCTGLRGSGLLVENWLLHSLPRQVRDLLTQPRPSSTSSSEPPSRPESDSFPT
FSTSHWSFLLAAESRI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggattaccagcaatacatctatgtcagccaggtgtgctatcacgaggcactgccctgg
ttctcccgcttcttcccatatgtggcgctgctgcagtcactggtgctgctggccagcggc
tgcttctggttccacttcccgctcacctcatcccgcattgagcacttcctgaccatcctg
ggcaagtgctgcgagtcaccctggacctcccgcgcactctcgcacaccgcacggctggac
agcggccagtgtcgacccacagaggaggagaaggaggaggaaaggctgcaggtccacctg
ccacacccagtccatcctgcctcctttaccagacagtccagcctagactctggtacagac
agccccctgctggtgaggtcggacagtgcgtccaccgcggcccctccctcaccttgcccc
tccatgctctcacgcacctcctcgctgtcttctctgtccttcatcgagacagtctctccc
cagccacagctgtcccgtgtcatcccagatgcgacgaggccaacagctagtcttgaccgc
agtgatggggagcaggcacgggcgctgtttgagagagtgaggcggttccgggcccactgt
gagagttctgacattatctacaaggtttacttggctcaaacaatattcaaggtcctgaag
gttgttcttatcgtgagctacaccacaccactgctgggatccatctctttcaaccacatc
tgccagcccttgacccacgccctgactggctaccaagccttcgagtgcactcatgccctg
gcctctgtcctacacaagttgctggtggtctacctgtgcctcgtgggcctttttggcctg
ctaggcctgtacactctcagctggatctggcacaagtccttgaggaagtactcctttcag
tgcttacatgagacgggttctatgctggatgttccagacttatgcaacgacctggcgttc
ctgcttcacatggcagaccagtatgaccctctactggcacaccgcctctctgtcttcctg
tccccggtcagtgagacgcggctgctggaggagaacctggagcggcgctggggagtggag
cgcctgcgcggcatgactacctttgacccccagggccgcacgcagcttcagctggtggct
ctgtccagcctgccccctgccctcttcaccctcagccagctggaggtgctaaagctggag
ctcatcactgatgccaagctctcagcacagatttccaacatgacatccctcaggcaagta
gatccaggcacactgcatctgtatcactgcacagctgcagtggagcccggagctctcctg
tgtctgcaggagcgtctggaggtccttcacctcaccttcatccaggccacagacattccc
ggttgggtatactcccttcgcggactacaggagttgcacatgactggacacttgggctgc
gagggtggagtgggtcgcggctgggcggtagggaacctgcgccagctccgccacctccgc
ctgctttcgctccgtgactcattgcagcgcataccggcagagttgggagaggtggcgggc
agtcttatgcgtctggaaatccacaatgaaggcgcaaggcttctggtgctcacggggctg
cggcgggtggtgggccttactgagctgcagcttcagggctgccagctggaacgcctgccc
tctgcacttttggccctcacaggcctccgtagtctcgacctgcagcacaactgcctgcgc
accctggaggagctgctgagcctgcagcacctgcggcgtctctccagcttgcgtctggct
cacaaccgtgtgctggccctgccgtccagtgtcggggttctgcgacgtctggagcttctg
gacctggcccacaatgagctgcagagcctgccaccagctctcttcaccctccacaggcta
cggcgactctacctggcaggcaacctgcttgaagtcctgccagcagaggtgggagcactg
gcgctgcttctggagcttgatctgagcggaaacaggctggagagtctcccagcggagctc
tgcacaaactgcctagagcttcgcaacctgaacgtgagctacaactccctgggctctctc
cctccagaccttggctctctaagccagctctcactgctggacctgagagggaacagtctg
gagcagcttcctgcagaactgggctgctgcactgggctacgtgggagcggcctcctggtg
gagaactggctgcttcactcactacctcgtcaggtccgggacctcctgacacagccccgc
ccgtcctccacctcttcttctgagccgccctcccgaccagagtctgacagcttccccact
ttctccactagccactggagctttctcttggctgctgagtctcggatataa
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