Clupea harengus (Atlantic herring): 105898608
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Entry
105898608 CDS
T09045
Symbol
cldn18
Name
(RefSeq) claudin-18
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecules
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
105898608 (cldn18)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105898608 (cldn18)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105898608 (cldn18)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105898608 (cldn18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105898608 (cldn18)
04147 Exosome [BR:
char04147
]
105898608 (cldn18)
04515 Cell adhesion molecules [BR:
char04515
]
105898608 (cldn18)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105898608 (cldn18)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105898608 (cldn18)
Exosomal proteins of colorectal cancer cells
105898608 (cldn18)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
L1 family
105898608 (cldn18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Amastin
DUF4064
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
105898608
NCBI-ProteinID:
XP_012681094
Ensembl:
ENSCHAG00000027194
UniProt:
A0A6P3VU31
LinkDB
All DBs
Position
1:complement(25137178..25139985)
Genome browser
AA seq
245 aa
AA seq
DB search
MASTMLQTGGFVLGILGIVALIAAVGMNNWSSQDRQGDVVTSVYTYKGLWRNCEVTTAGL
TECRPFYGLLGYSGSFQAVRALMIVGIVMGVISALLGLFSLKCFKMGSMEDSPRAKMTLT
AGIMFIVAGICGIAGASIYANQIVASYMRTMYNPNYGGNEGIGGMGGGGFGGNSIPRYTF
GPALFVAWIGGALVLLGGILDCVAYKGLVPEKSSYGAVAYKAPSHSNATSVHTVKEEGRR
DQKYV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccatgctacagactggtggcttcgtcctaggcattcttggtattgtagca
cttattgctgccgttggtatgaataactggagcagtcaggatcgtcaaggagatgttgtg
acctctgtatacacttacaagggactttggcggaattgtgaagttaccacagcagggtta
acagaatgccggcctttctatggtctccttgggtactcaggttcttttcaagccgtgagg
gcgctgatgattgtggggattgtcatgggagtcatcagcgctctgctgggccttttctcc
ctgaagtgctttaaaatgggcagtatggaagattccccccgagcaaagatgacccttact
gctggcatcatgttcattgttgcaggtatttgtggcatcgcaggagcttcaatctatgcc
aatcagattgtggctagttatatgaggacaatgtataaccccaattatggtggaaatgaa
gggataggaggaatgggaggaggaggattcgggggaaattccattccaaggtacacattt
ggacctgcactctttgtggcctggataggaggagcactggtgctgttggggggcatactg
gattgtgttgcctacaaagggcttgtacctgagaagtcaagctatggagcagtggcttac
aaagccccttcccacagcaatgcaacttcagtgcacactgtcaaggaagaaggaagaaga
gatcaaaaatatgtctga
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