Clupea harengus (Atlantic herring): 105898649
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Entry
105898649 CDS
T09045
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105898649 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105898649 (gfap)
Membrane trafficking [BR:
char04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
105898649 (gfap)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
105898649 (gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
DUF1664
TolA_bind_tri
TPR_MLP1_2
Phage_GP20
YwqH-like
FlgN
PI3K_P85_iSH2
DivIC
Motif
Other DBs
NCBI-GeneID:
105898649
NCBI-ProteinID:
XP_012681146
Ensembl:
ENSCHAG00000010212
UniProt:
A0A6P3VV08
LinkDB
All DBs
Position
1:21293622..21303611
Genome browser
AA seq
467 aa
AA seq
DB search
MPATSPSPAPLSLPLSLCLSMENQRVQSSYRKRFGPQSSSSMGARLSGGRLSLHGSQRHL
SLSSPMTLTASRLSLGSAPIIGERLDFSTDSLLKAQYRETRTNEKVEMMGLNDRFASYIE
KVRFLEQQNKLLVAELNQLRGKEPSRLGDIYQEELRELRRQVDGLGSGKARLEIERDNLA
GDVATLKQRLHDECALRQEADNNLNTFRQDVDEAAMSRVQLERKIDALQDEIMFLKKIHE
EELRELQEQVQAQQIHVEMDVSKPDLTAALRDIRVQYESMASSNMQETEDWYRSKFSDLT
DAAGRNTEALRQAKQEANEFRRQVQVLTCDLEALRGTNDSLERQLRDMEDRFAMETAGYQ
DSVARLEDEIHSLKEDMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPVQSFA
NLQFRETSMDTKFSPESHVKRSIVVRTVETRDGEIIKESTTERKELP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccacttccccttccccagccccactctctctccctctctctctctgtctcagc
atggagaaccaacgagtccagtcatcgtaccgcaagcgcttcgggccccagagcagctcc
tcaatgggggcgcgtctctccggcggcaggctctcgctgcacggcagccagcgccacctc
tccctctccagcccaatgaccctcactgcctcccggctgtccctgggcagcgcgcccatc
atcggcgagcggctggacttctccacggactcgctgctcaaggcccagtaccgggagacg
cgcaccaacgagaaggtggaaatgatgggcctgaacgaccgcttcgccagctacatcgag
aaggtgcgcttcctggagcagcagaacaagctgctggtggccgagctgaaccagttgcgg
gggaaggagcccagccgcctgggggacatctaccaggaggagctgcgcgagctccgcagg
caggtggacggcctgggctccggcaaggcccggctggagatagagagggacaacctggct
ggcgacgtggccaccctcaagcagaggctgcatgatgagtgtgctctgcggcaggaggct
gacaacaacctcaacactttcagacaggatgttgatgaggcggcgatgagcagggtgcag
ctggagaggaagattgatgccctgcaggacgagatcatgttcctgaagaagatccatgag
gaggagctgcgtgagctgcaagagcaggtgcaggcccagcagatccatgtggagatggac
gtgtccaaacccgacctgaccgctgcgctgagggacatcagagtccagtacgagtccatg
gcctcctccaacatgcaggagaccgaggactggtaccgatccaagttttctgacctgact
gatgcagccggtcgcaatacagaagctctaagacaggccaaacaagaggccaatgagttc
cgccggcaagtgcaggtgctgacctgtgacctggaagctcttcgtggtactaatgactct
cttgagcggcagctgcgtgacatggaggatcgctttgccatggagacggctggataccag
gacagcgtcgcccgcctggaggatgagatccactccctgaaggaggacatggcgaggcac
ctgcaggagtaccaggacctcctcaatgtcaaactggccctggacatcgagatcgccacc
tacaggaagctactggagggggaagagagcagaatcaccgttcctgtgcagagctttgcc
aatctccaattcagagaaacttctatggacacgaagttctcccctgaatctcatgtgaag
aggagcattgtggtgcggaccgtggagactcgcgatggggagatcataaaggagtcaacc
acggagaggaaggagctgccctaa
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