Clupea harengus (Atlantic herring): 105898714
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Entry
105898714 CDS
T09045
Symbol
dars2
Name
(RefSeq) aspartate--tRNA ligase, mitochondrial
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105898714 (dars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105898714 (dars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105898714 (dars2)
03029 Mitochondrial biogenesis [BR:
char03029
]
105898714 (dars2)
Enzymes [BR:
char01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
105898714 (dars2)
Amino acid related enzymes [BR:
char01007
]
Aminoacyl-tRNA synthetase
Class II (A)
105898714 (dars2)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105898714 (dars2)
Prokaryotic type
Other AARSs
105898714 (dars2)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
105898714 (dars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Cupin_3
Motif
Other DBs
NCBI-GeneID:
105898714
NCBI-ProteinID:
XP_012681218
Ensembl:
ENSCHAG00000025923
UniProt:
A0A6P3VU43
LinkDB
All DBs
Position
25:complement(13974365..13982234)
Genome browser
AA seq
654 aa
AA seq
DB search
MSCKYKTLLRKGLCLTLLRTSFLGRTALFYPRKVGATTRITASWIWTHASLRGISNSTSG
NNHFSLRTHSCGEVCSTHIGREVTLYGWVQYVRQDLFVILRDFSGLVQILIPQDEALRKT
LFDLPLESVVMVRGKVQLRPEGQENKTMSTGEVEVCADSLEVLNKCRKLPFEIKDFVKKS
EALRMQYRYLDLRSSQMQYNLRVRSRLVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEF
VVPSGEPGKFYSLPQSPQQFKQLLMVAGMDRYFQMARCYRDEGSKPDRQPEFTQVDIEMS
FIDQAGIQALIEGLVQYAWPDEKGTMSTPFPSMTYEEAMRDYGVDKPDTRFEMKLVDVSE
AFGNTEIQFLRDALQQPGGCVLAIRVPDGAKHLKGKDLEALKETAKTQFNQDVSIVLVRP
DGSLKSPLSRLLSEGARLQLLQMTLASAGDLVLLAAGTGDHMRPLLGKLRLQCADLLEGH
GVALRDPSVFHFLWVVDFPLFLPKEDDPEQLESAHHPFTAPVPEDTPLLYSQPHKVRGQH
YDLVLNGCEIGGGSIRIHSASEQRYILKTILQEDLSVLSHLLEALDSGAPPHGGIALGLD
RLVSIMVGAPSIRDVIAFPKSFRGHDLMSRAPDFVSEEELKPYHIKVTWPEGDK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcaaatacaagactctgcttcggaaaggtttgtgtttgactctactgagaact
tcctttctgggaagaactgcacttttctaccctcgtaaggtgggtgccactacacgaatc
acggcttcttggatctggacccacgcatcactcagaggcatctcaaacagcacctcaggt
aataatcatttctctttgagaacacattcttgtggagaagtatgctcgacacacattgga
cgggaagtaacattgtatggctgggtgcaatacgtgagacaggatttatttgtaatcttg
agagatttcagtggactggttcaaatcctcatcccccaggatgaggctcttaggaaaact
ctttttgacctgccccttgagtctgttgtcatggtgaggggaaaggtgcagcttcgtcca
gaagggcaggagaacaagacaatgtccacaggagaagttgaggtctgtgctgacagcttg
gaagttttaaataaatgcagaaaattgccttttgaaattaaagattttgtcaaaaaatca
gaggctcttcgaatgcagtaccgctaccttgacctccgctcatcacagatgcagtataat
ttaagagtacgctctcgtctggtgatgaaaatgagagaatacctttgcaatctacatgga
tttgtggacgtggaaacgccaaccttatttaaaagaacgcctggtggagccaaagagttt
gttgtaccttctggggagcctgggaagttttactctttaccccagagcccacaacagttc
aagcagctgctgatggtggcaggcatggacaggtactttcagatggctcgctgctatcga
gacgagggttccaagcctgacagacagccggaattcacgcaggtggatattgagatgtct
tttatagatcaggctgggatccaggccctgattgaaggcctggtgcagtatgcgtggcca
gacgagaagggcaccatgagcacgccgtttccttccatgacctatgaagaagccatgaga
gattatggagtggacaaaccggacaccagatttgaaatgaagctcgtagatgttagtgaa
gcttttgggaacactgaaatccagttccttcgggatgctcttcagcaaccaggaggctgt
gtcctggccatccgtgtgccagatggagctaaacatcttaagggtaaagacttagaagcc
ctcaaagaaactgccaagacacagttcaaccaggacgtgagcattgtgctggtgaggccc
gacggttctctgaagtcgcccctcagcaggctcctctcggaaggtgccaggctgcagctg
ctccagatgaccctagccagtgctggagacctcgtccttctcgccgccggcactggggac
cacatgcgccctctcctgggcaagttaaggctgcagtgtgccgacctgcttgagggccac
ggtgtggcgctgcgtgacccctctgtctttcacttcctgtgggtggtggactttcccctg
ttccttcccaaagaagacgacccagagcagctggagtcagctcaccacccgttcactgct
cccgtcccggaagacacccctctcctgtactctcagcctcacaaggtgcgcggccagcat
tatgacctggttctgaatggctgtgagattggaggaggctccattcgtattcacagcgcc
tcggagcagcgctacattctgaagaccatcctccaggaggacctctccgtgctctctcat
ctcctggaggctctcgattctggagcccctcctcacggcggcattgccttgggacttgac
cgcctggtatccattatggttggtgcccccagcatcagggatgttatcgccttccccaag
tcgttccgtggtcatgacctgatgagtcgagcacctgactttgtgtctgaagaggaactg
aagccttaccacatcaaagtgacatggcccgagggggacaaatag
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