Clupea harengus (Atlantic herring): 105898743
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Entry
105898743 CDS
T09045
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04382
Cornified envelope formation
char04510
Focal adhesion
char04512
ECM-receptor interaction
char04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105898743 (lamc2)
04518 Integrin signaling
105898743 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105898743 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105898743 (lamc2)
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GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
JAG1-like_EGF2
DUF5891
Nup49_C
Motif
Other DBs
NCBI-GeneID:
105898743
NCBI-ProteinID:
XP_031418930
UniProt:
A0A6P8F4L5
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Position
25:14133505..14141939
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AA seq
929 aa
AA seq
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MYFYAPSSYLGNQALSYGQILSFSLRLDRGVRRPSVADVVLQGAGLKVAASLGDLRTVVP
CAKKITYTFRLDELPGSKWKPELSSLQFQTLLSNLTGIMIRGTFGENGRGYLDNVSLMSA
RKGSGPPAGWVEKCSCPTGYEGQFCERCAPGYKRHSHDNDPLSSCEPCACQAGSCDPQTG
ECYSSDGISPGQSCPAGSYNNPEKPTSCLPCPCPGGETCSVTSGTLEVKCDNCPPGSTGS
LCQVCADGFYGDPRGERGTKRPCQRCQCNGRGDSSAGTCDRTTGECLRCLNNTRGPSCES
CLPGFYHIKPADACKACACDPAGSASQTCSDVGQCDCREGYEGHRCQRSSCPSCFDPLKG
KIDDYAVKVHEIEALFNGVESGRVPVNDAQMERAIKAAEKVVADMQEKAGKLSEMERSLE
ERLNEVGTTHLRGDREVQSLAETMDNIKLQEQRYKRQVSTIQQLVESTKLKLQQARQEIR
QADFPSGDAAAGTDTLSSLALTATTLAEQQQGKADYIEKVANSALSDAEKALNLMRTAMT
GENAVKKLIVDLKAQYEKKSSEVKALETEASGLTKAAGEESTIATDTLKQISSLVLPQPP
TEDMDHLVASLNDLKRWVKGNLTAYQALEKDVDADQSTAQSLLDQGRAAQQEYDALLGRV
DAAKAGATLALEAINNHNSAVDEALETLQGLDDRINDNKELAEEAISKLPGINDTITDAL
ATSSKVVATLDQVNALNEEATATISTQGGVVTSLEEFQKKMPELLKLSSELEKDVGVLRG
DVEGLQDQANDTLSRLEGETASAEAQKDAGEQVAEDAATALNNAQSTKDAVGETLKTVTD
LLDAFGTTSTVDPSKVDKLQAAFNAATVRVTQELLPKLRELEDLEVHQKATLSNMSADID
GILEDIRNLEVIQKTIPVGCYNSPPIERP
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtacttctatgccccatcctcatacctgggcaaccaggccctgagctacggccagatt
ctatctttctctctccgtctggacagaggggtccgtcgtccctccgtggccgatgtggtg
ttgcagggcgctggactgaaagtggctgcctctctgggtgacctaaggactgtggtgccc
tgtgccaagaaaatcacctacactttcagactggatgagctgcctggaagtaaatggaag
cctgaactgtcatccctccagttccaaacactgttaagcaacttaaccggcatcatgatc
agggggacatttggtgaaaatggacgtggttatttggacaatgtgagtcttatgtctgct
cgcaaggggtctggcccccctgcaggctgggttgagaagtgcagttgccccacaggatat
gaggggcaattctgcgagcgctgtgctcctgggtacaagagacattcccatgacaatgac
cccctgagctcctgtgagccctgtgcctgtcaggcaggaagctgtgacccacaaaccgga
gaatgctactcttctgatggcatatcccctgggcagtcctgcccggccggttcctataac
aacccagagaaacccacttcctgcctgccgtgcccctgccctggtggtgagacgtgctcg
gtgacgtcagggaccctggaagtcaagtgtgacaactgcccaccagggagcacaggttct
ctttgccaagtctgtgccgacggtttttatggtgatccccgtggtgagagaggcaccaag
agaccatgccagcgctgccagtgtaacgggcgcggggacagctcggcggggacctgtgac
cgcaccacgggggagtgtctaaggtgcctgaacaacaccagaggcccctcctgcgagagc
tgcttgccaggcttctaccacatcaaacctgcagacgcatgcaaagcttgcgcctgtgat
cccgcgggctctgcctctcagacctgcagtgatgtgggccagtgcgactgccgggagggt
tatgaaggacaccggtgccaacgatcttcatgcccatcctgctttgacccgctcaagggc
aagatagatgactacgctgttaaggtgcatgagattgaggccctgttcaatggggttgag
agcggcagggttccagtgaatgatgctcagatggagagagccatcaaagctgcagagaag
gtggtggcagacatgcaggaaaaagcagggaaactctcagaaatggagaggagtcttgag
gagaggctaaatgaagtcggcacaacccatctgagaggggacagagaagtgcagtctctg
gctgaaaccatggacaacattaaactacaggagcagcggtacaagagacaagtctctacc
atccagcaacttgttgagagtacaaagctaaaactacagcaagccagacaggagattagg
caagcagacttcccctctggtgatgctgctgctggcactgacaccttgtccagcttagcc
ctgacggccaccaccctagcagagcagcagcaggggaaagcagattacattgaaaaggtt
gctaacagtgccctgtctgatgcggagaaagccctgaacctgatgcgaacagctatgacg
ggggagaacgctgtgaagaaactgatagtcgacctgaaggctcagtatgagaaaaagagc
tctgaggtgaaggccctggagacggaggcgtctggcctgaccaaggcagccggagaggag
agcaccatcgccaccgacaccctgaaacagatctcctctctggtgctcccccagcctccc
acggaggacatggatcatttggtagccagtctgaatgacctgaagaggtgggtgaagggg
aacctaacagcataccaggccctggagaaggacgtcgatgctgatcagagcacagcgcag
agcctcttggatcagggacgagccgctcagcaggaatatgacgcgcttcttgggagagtc
gacgcagccaaagctggggcaaccctggctctggaggccataaacaaccacaacagcgct
gtggatgaagctctcgagacactgcaaggtcttgatgataggattaatgacaacaaggag
ttggcagaggaggccatctctaagttgccaggcatcaatgataccattacagacgcactt
gccacaagctctaaggtagtggctaccctggaccaagtgaatgcattgaacgaagaagcc
accgccaccatcagcacacaggggggagttgtgaccagcctggaggaatttcagaagaaa
atgcctgaattgctgaagttgtcctcggagctggagaaggatgttggtgtccttagaggg
gatgtggagggtctccaggaccaggcgaatgacacgctgtccagattggaaggggagaca
gcatcagcagaggcccagaaggatgcaggggaacaggttgcagaagatgccgcaactgcc
ttaaacaatgcacagagcaccaaagatgctgttggggagacgcttaagacggtcacagac
cttctagatgcttttggcaccacaagcactgtggatccgagtaaggtggataagctccag
gcggccttcaacgccgctaccgtccgcgtgacccaggagctgctgcccaagctgagggag
ctggaggacctggaggtgcaccagaaggctaccctctccaacatgagcgcagacatcgac
gggatcctggaagacatcaggaacctggaggtcatccaaaaaactatccccgtgggctgc
tacaattcaccacccatagagaggccctga
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