KEGG   Clupea harengus (Atlantic herring): 105898743
Entry
105898743         CDS       T09045                                 
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
  KO
K06246  laminin, gamma 2
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04382  Cornified envelope formation
char04510  Focal adhesion
char04512  ECM-receptor interaction
char04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105898743 (lamc2)
   04518 Integrin signaling
    105898743 (lamc2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105898743 (lamc2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105898743 (lamc2)
SSDB
Motif
Pfam: Laminin_B EGF_laminin EGF_LMN_ATRN JAG1-like_EGF2 DUF5891 Nup49_C
Other DBs
NCBI-GeneID: 105898743
NCBI-ProteinID: XP_031418930
UniProt: A0A6P8F4L5
LinkDB
Position
25:14133505..14141939
AA seq 929 aa
MYFYAPSSYLGNQALSYGQILSFSLRLDRGVRRPSVADVVLQGAGLKVAASLGDLRTVVP
CAKKITYTFRLDELPGSKWKPELSSLQFQTLLSNLTGIMIRGTFGENGRGYLDNVSLMSA
RKGSGPPAGWVEKCSCPTGYEGQFCERCAPGYKRHSHDNDPLSSCEPCACQAGSCDPQTG
ECYSSDGISPGQSCPAGSYNNPEKPTSCLPCPCPGGETCSVTSGTLEVKCDNCPPGSTGS
LCQVCADGFYGDPRGERGTKRPCQRCQCNGRGDSSAGTCDRTTGECLRCLNNTRGPSCES
CLPGFYHIKPADACKACACDPAGSASQTCSDVGQCDCREGYEGHRCQRSSCPSCFDPLKG
KIDDYAVKVHEIEALFNGVESGRVPVNDAQMERAIKAAEKVVADMQEKAGKLSEMERSLE
ERLNEVGTTHLRGDREVQSLAETMDNIKLQEQRYKRQVSTIQQLVESTKLKLQQARQEIR
QADFPSGDAAAGTDTLSSLALTATTLAEQQQGKADYIEKVANSALSDAEKALNLMRTAMT
GENAVKKLIVDLKAQYEKKSSEVKALETEASGLTKAAGEESTIATDTLKQISSLVLPQPP
TEDMDHLVASLNDLKRWVKGNLTAYQALEKDVDADQSTAQSLLDQGRAAQQEYDALLGRV
DAAKAGATLALEAINNHNSAVDEALETLQGLDDRINDNKELAEEAISKLPGINDTITDAL
ATSSKVVATLDQVNALNEEATATISTQGGVVTSLEEFQKKMPELLKLSSELEKDVGVLRG
DVEGLQDQANDTLSRLEGETASAEAQKDAGEQVAEDAATALNNAQSTKDAVGETLKTVTD
LLDAFGTTSTVDPSKVDKLQAAFNAATVRVTQELLPKLRELEDLEVHQKATLSNMSADID
GILEDIRNLEVIQKTIPVGCYNSPPIERP
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgtacttctatgccccatcctcatacctgggcaaccaggccctgagctacggccagatt
ctatctttctctctccgtctggacagaggggtccgtcgtccctccgtggccgatgtggtg
ttgcagggcgctggactgaaagtggctgcctctctgggtgacctaaggactgtggtgccc
tgtgccaagaaaatcacctacactttcagactggatgagctgcctggaagtaaatggaag
cctgaactgtcatccctccagttccaaacactgttaagcaacttaaccggcatcatgatc
agggggacatttggtgaaaatggacgtggttatttggacaatgtgagtcttatgtctgct
cgcaaggggtctggcccccctgcaggctgggttgagaagtgcagttgccccacaggatat
gaggggcaattctgcgagcgctgtgctcctgggtacaagagacattcccatgacaatgac
cccctgagctcctgtgagccctgtgcctgtcaggcaggaagctgtgacccacaaaccgga
gaatgctactcttctgatggcatatcccctgggcagtcctgcccggccggttcctataac
aacccagagaaacccacttcctgcctgccgtgcccctgccctggtggtgagacgtgctcg
gtgacgtcagggaccctggaagtcaagtgtgacaactgcccaccagggagcacaggttct
ctttgccaagtctgtgccgacggtttttatggtgatccccgtggtgagagaggcaccaag
agaccatgccagcgctgccagtgtaacgggcgcggggacagctcggcggggacctgtgac
cgcaccacgggggagtgtctaaggtgcctgaacaacaccagaggcccctcctgcgagagc
tgcttgccaggcttctaccacatcaaacctgcagacgcatgcaaagcttgcgcctgtgat
cccgcgggctctgcctctcagacctgcagtgatgtgggccagtgcgactgccgggagggt
tatgaaggacaccggtgccaacgatcttcatgcccatcctgctttgacccgctcaagggc
aagatagatgactacgctgttaaggtgcatgagattgaggccctgttcaatggggttgag
agcggcagggttccagtgaatgatgctcagatggagagagccatcaaagctgcagagaag
gtggtggcagacatgcaggaaaaagcagggaaactctcagaaatggagaggagtcttgag
gagaggctaaatgaagtcggcacaacccatctgagaggggacagagaagtgcagtctctg
gctgaaaccatggacaacattaaactacaggagcagcggtacaagagacaagtctctacc
atccagcaacttgttgagagtacaaagctaaaactacagcaagccagacaggagattagg
caagcagacttcccctctggtgatgctgctgctggcactgacaccttgtccagcttagcc
ctgacggccaccaccctagcagagcagcagcaggggaaagcagattacattgaaaaggtt
gctaacagtgccctgtctgatgcggagaaagccctgaacctgatgcgaacagctatgacg
ggggagaacgctgtgaagaaactgatagtcgacctgaaggctcagtatgagaaaaagagc
tctgaggtgaaggccctggagacggaggcgtctggcctgaccaaggcagccggagaggag
agcaccatcgccaccgacaccctgaaacagatctcctctctggtgctcccccagcctccc
acggaggacatggatcatttggtagccagtctgaatgacctgaagaggtgggtgaagggg
aacctaacagcataccaggccctggagaaggacgtcgatgctgatcagagcacagcgcag
agcctcttggatcagggacgagccgctcagcaggaatatgacgcgcttcttgggagagtc
gacgcagccaaagctggggcaaccctggctctggaggccataaacaaccacaacagcgct
gtggatgaagctctcgagacactgcaaggtcttgatgataggattaatgacaacaaggag
ttggcagaggaggccatctctaagttgccaggcatcaatgataccattacagacgcactt
gccacaagctctaaggtagtggctaccctggaccaagtgaatgcattgaacgaagaagcc
accgccaccatcagcacacaggggggagttgtgaccagcctggaggaatttcagaagaaa
atgcctgaattgctgaagttgtcctcggagctggagaaggatgttggtgtccttagaggg
gatgtggagggtctccaggaccaggcgaatgacacgctgtccagattggaaggggagaca
gcatcagcagaggcccagaaggatgcaggggaacaggttgcagaagatgccgcaactgcc
ttaaacaatgcacagagcaccaaagatgctgttggggagacgcttaagacggtcacagac
cttctagatgcttttggcaccacaagcactgtggatccgagtaaggtggataagctccag
gcggccttcaacgccgctaccgtccgcgtgacccaggagctgctgcccaagctgagggag
ctggaggacctggaggtgcaccagaaggctaccctctccaacatgagcgcagacatcgac
gggatcctggaagacatcaggaacctggaggtcatccaaaaaactatccccgtgggctgc
tacaattcaccacccatagagaggccctga

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