Clupea harengus (Atlantic herring): 105898761
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Entry
105898761 CDS
T09045
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X2
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105898761 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105898761 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
char04031
]
105898761 (rhot1a)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
105898761 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
105898761 (rhot1a)
GTP-binding proteins [BR:
char04031
]
Small (monomeric) G-proteins
Rho Family
Miro
105898761 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
Arf
EF-hand_1
MMR_HSR1
AAA
AAA_22
EF-hand_8
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
105898761
NCBI-ProteinID:
XP_012681271
Ensembl:
ENSCHAG00000007314
UniProt:
A0A6P3VU69
LinkDB
All DBs
Position
1:complement(20745448..20761278)
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AA seq
637 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSEEQLFQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPSCIKSLTRIFKVSDLDNDGILNDNELNFFQRTCFNIPLATQALEDVKNVVRKNISEG
VKDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPLLKIPSDCTTE
LNHNAYLFLQGVFDKHDKDRDCALSPDELKDLFKVFPYLPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRCLEYMGYLGYSIINEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVMGAHHSGKSGFLQAFLSRNLTRQLKLREDHKSFYAMNTTYVYGQEKYLLLHEVSPDL
DFLSETDLACDVVCLIYDVSNPRSFEYCAKAYKRYFMDSKTPCMFIAAKSDLHEVRQQST
LPPLDFCRKHRLHPPQPFTCNTDDAPGKDIYTKLTTMAMYPSTRSHPASWPWSSSLGVLL
TQALHWGRRPSTLLARCSKSCAWLAVCLFSLHLLTSC
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggacgtcaggatattgctggttggtgaacccaaagtggggaagacatcactg
atcatgtcattggtcagtgaggaattccctgacgaggttcccctgcgtgctgaggagatc
accattccagcagatgtcacaccagaaagagtgcccacacacatagtagactattcagaa
gctgagcagtcagaagaacagttgttccaagagatttccaaggctaatgttatatgcatt
gtctattcggtcaacaacaagaagtctattgagaaggtgacaagccattggattcctctc
atcaatgacagaacagacaaagacagcagggtgccgctgatcctggtggggaacaagtcg
gacctggtggagcacagcagcatggagaccatcctgcccatcatgaaccagtactcggac
atcgaaacctgcgtggagtgttcagcgaagaacctgaagaacatttccgagttgttctac
tatgcccagaaggccgtgctccaccctacagggccgctgtactgccccgaggagaaggag
atgaaaccgtcgtgtatcaaatcactcacgcgcatttttaaggtgtccgacctggacaat
gatggcattctcaacgacaacgagctcaatttcttccagaggacgtgcttcaacatccca
ctggccactcaggccctggaggacgtgaagaatgtggtgaggaagaacatctcagaagga
gtgaaggacaacgggctcacgctcaaaggtttcctgttcctgcacacactcttcatccag
aggggccggcacgagaccacctggaccgtcctgcggaggtttggctacgacgacgacctg
gagctcacacaggagtacctgtttccactgttgaagatcccttcagactgcaccacggag
ctgaaccacaacgcatacctctttttgcagggtgtctttgacaagcacgacaaagaccgg
gactgtgctctgtccccggacgagctgaaggacctgttcaaagtcttcccctacctaccc
tggggtcctgatgtcaacaacactgtctgcaccaacgagcagggctggatcacctaccag
ggctacctgtcgcagtggacgctaacgacgtacctggatgtgcagaggtgtctggagtac
atgggctaccttggctattccatcattaatgaacaggagtcccaggccgctgccatcaca
gtgacgcggaacaagcgcatcgacctgcagaagaagcagacccagcgcagcgtgttccgc
tgtaacgtcatgggagcgcaccacagcggcaagagcggctttctgcaggcctttctgagc
aggaacctcacgcgacagctgaagttaagagaggaccacaagtccttctacgccatgaac
accacctacgtctacggccaggagaagtacctgctgctccatgaagtgtctccagacttg
gacttcctttctgagacggacctggcctgtgacgtggtctgtctgatctatgatgtcagc
aacccacgttccttcgagtactgcgccaaggcctacaagcgctacttcatggacagcaag
acaccgtgtatgttcatcgctgccaagtccgacctgcacgaggtgcggcagcagagcacc
ctccccccgctggacttctgccgcaagcaccggctgcacccgccacagcctttcacctgc
aacacagacgatgcgcccggcaaagacatctacaccaaactcaccaccatggccatgtac
ccctctactcgttcccaccctgcctcttggccgtggagcagcagcctcggtgtcctccta
actcaggccctgcactggggccggaggccctccaccctgctagctaggtgctcaaagtca
tgcgcttggttggctgtgtgtctcttttcgttgcatttgttgacttcatgctaa
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