Clupea harengus (Atlantic herring): 105898784
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Entry
105898784 CDS
T09045
Symbol
srebf2
Name
(RefSeq) sterol regulatory element-binding protein 2 isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898784 (srebf2)
04131 Membrane trafficking [BR:
char04131
]
105898784 (srebf2)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
105898784 (srebf2)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105898784 (srebf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
105898784
NCBI-ProteinID:
XP_031428263
Ensembl:
ENSCHAG00000010002
UniProt:
A0A6P8FIQ7
LinkDB
All DBs
Position
1:complement(23896887..23913295)
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AA seq
1183 aa
AA seq
DB search
MDGGEYISSMENMDPTLAELGDEFTLGDIDEMLQFVSGQVGDFPDLFEDQMAAGSVQNGV
ASTPRQAPAAPQAPQTPQAPQTPQTVFQTSAGGSVTLAATPVLPPHSLPLTPPQTPVQTV
TVAQTQPQLRTPPLLQPRPQQHVQPIQPQQAVQPMQVQTQTIPVHTQALTVQTQSFPVHT
QTLAMHNQTMPVQTQAQTVMITSGPHQSRFIQNPVICHQSPTAGFQVIQPQMQSIMTSPQ
MQPMTIQHQRLLTPSGQTIQTLSTAPTAVHTMQQQVQQVLVHQPQILKTDSLVLTTLKPD
GTQVLSTMQNPNGITHLTTPIQTTSLQVPTLMGGNILHTVPVMMSSGDKLPIKQLSSGTI
HSGVQSRACIDQGSPMIVGPGGVVKEGERRTTHNIIEKRYRSSINDKIIELRDLVMGHDA
KMHKSGVLRKAIDYIKYLQQVNHKLRQENLTLKMANQKNKSVCLVEDMELKPELQMMSPP
ASDSGSGSPDQFSPYCIDSEPASPLLEHEQMKIEPDSPSTVGVMDRSRLLLCALTFLCLS
LNPLPSLLGSEAHVGPSWGADAGGHGPTRTLFSFPSQTQNFASWLWCLLPWVMVWVLSGI
GAVWGCVRVLYLWEPVTPLHSPRSVSFWRHRKQADLHLYRGENYAAVTSLETCLSILSRA
LPTSGLDLACSLSWNVIRYCLHRPTPLGWLVRQVGGRHEGEESQTSARDAALVYHRLSQL
QLTGKLADRSSLWALSLSLSAVNLSESAQGKMPPTQLAQIYVTAATALRTALGHHLSCLP
GHLLNRAESVASQSDGKPIPDGLRWLFTPLGRQFFLSCDWSVKSESHEGVYTSQRDQADP
IAQLHCCFCEKLLERAVHSLIQPQSHSGANKYKDDSGEFFGALEFLQLLNSCTEESSTPS
PSFPALPNQNTTPVGDPVCRWWMLVLKAALHWLQGDDAAVRSLLAEAERVPRALHTLDHP
LPKAVQLLCKAVQVSLSQQKGEGVGACLAHCERSSAYLRASISVQLAQSATWLNKGVELL
VCDLLLTLRTNLWQRGGSNGESGPALGSQLAGFQRDLSSLRKLGQCYRQAQHKVFLHETT
VRLMAGASPTRTHQLLEHSLRRRPQDPGHTAEGTCVLGERERAHAILLACRHLPLPLLTP
PGHRARLLAEAKRTLERVGDRRSVQDCQQILLRLGGGTTMAAS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggagagtatatttcttcaatggaaaacatggatccaacattagcagaactt
ggtgatgaattcacacttggggacatcgatgaaatgctccagtttgttagcggtcaggtg
ggggatttccccgacctctttgaggaccagatggctgctggttctgtgcagaatggggtg
gcgtcgaccccgcgccaggcccccgctgcccctcaggccccccagaccccccaggccccc
cagacccctcagaccgtgttccagaccagtgcaggaggcagcgtgaccttggccgcaact
cccgtgctgccgcctcactctctcccgctcacaccgccccagacgccagtgcagacggtg
accgtggcgcagacccagccacagctgcgcacgccacccctgctgcagccccggccccag
cagcacgtgcagcccatccagccgcagcaggccgtgcagccgatgcaggtgcaaacgcag
accatccccgtgcacacacaggccctcactgtgcagacgcagagcttccctgtgcacacc
cagacgctagctatgcacaatcagacgatgcctgtgcaaacacaggcgcagacggtgatg
attacgtcagggccgcatcaatcccgcttcattcaaaaccctgtcatctgccaccagagc
cccactgctggcttccaggtcatccaaccacagatgcagagcattatgacatcaccacag
atgcagccaatgacaatccagcaccagcgtctgctgacgccgtcagggcagaccatccag
accctctccacagcgcccactgctgtgcacacaatgcaacaacaagtgcaacaagttctg
gtccaccaaccccagatcctcaagaccgactctctggttctgacgactctaaaaccagac
ggaacccaggttctatccaccatgcagaaccctaatggcatcacccaccttacaacccct
attcaaacaacttcgcttcaggttccgactctgatgggcggcaacatcctgcatactgtg
ccggtcatgatgagtagtggtgacaagttgccaatcaagcagctgtcatcaggcaccatc
catagtggagttcaaagcagggcatgcatagaccagggttcaccaatgattgtgggcccc
gggggtgtggtaaaggaaggggagcgcaggaccacccacaacatcattgagaagaggtat
cgctcctccatcaacgacaagatcattgagctccgagacctggtcatggggcatgatgcc
aagatgcacaagtcaggtgtgttgcgcaaggccattgactacatcaagtacctgcagcag
gtcaaccacaagctacggcaggaaaacctgaccctcaagatggccaaccagaagaacaaa
tctgtgtgtctggttgaagacatggagctgaagccggagttgcagatgatgtctcctcca
gcctctgactcgggctctggctccccagaccagttctccccctactgcatcgactcggag
cccgccagccctctgctggagcacgagcagatgaagatcgagccggattctccctccact
gtcggagtgatggaccgctcccgtctgctcctctgcgccctcaccttcctctgcctctcc
ctcaaccccctgccctccttgctggggtctgaagctcacgttggacccagctggggtgct
gatgctggcggccatggacctaccagaactctcttctctttcccctctcaaacacagaac
tttgcttcctggttatggtgtctgttgccgtgggtgatggtgtgggtactgagtgggatc
ggtgcggtgtgggggtgtgtgcgggtgctctacctatgggagcctgtgacccctctccac
tcacccagatctgtgtccttctggaggcaccgcaagcaggccgacctgcatctgtacagg
ggtgaaaactatgctgcagtcaccagcctggagacctgcctgtccatcttatccagagct
ctacccaccagcggactggacctagcctgctctctttcctggaacgtgattcgctactgt
ctccataggcccacccccttgggatggcttgtgcgccaggttggtggacgacatgaaggg
gaggagtctcagactagtgcccgggatgcagctctggtctaccaccgcctcagccagctc
cagctcacaggtaaattggccgaccgcagcagcctctgggctctgtctctttccttgagt
gcggtgaacctgagcgagagtgcccaggggaagatgccccccacccagctggcacagatc
tacgtcaccgctgcaactgccctgcggacagcactgggccaccatctctcgtgcctgcct
ggccatttgctgaatcgtgctgagagtgtggccagccaatcagacggcaagcccattcct
gatggcctgcgctggctcttcaccccattgggcaggcagttcttcctgagctgtgattgg
tcagtgaagtcagagagtcatgagggagtgtacacgtcccagagagaccaagcggaccct
attgcccagctgcactgctgcttctgtgagaagcttctggaaagggccgtccactccctt
atccagccccaaagtcactctggggccaacaaatacaaagatgactctggggagttcttc
ggtgctctggagttcctccagctgctgaacagctgcactgaagagtcctccaccccctca
ccctccttcccggctctgcccaatcaaaacacgacaccagtgggagaccctgtgtgccgc
tggtggatgctggtcctgaaggctgcgcttcactggctgcagggcgacgatgcagctgtg
aggtcgttactagctgaggctgaacgtgtccccagagcactgcacacactcgaccaccct
ctgcccaaggctgtgcagctgctgtgtaaggcggtgcaggtgagcttgagccagcagaag
ggggagggtgtgggcgcttgcctggcccactgcgagcgctccagcgcctacctgcgcgcg
agcatctctgtgcagctggcccagtctgccacctggctcaacaagggggttgagcttctg
gtgtgtgacctcttactgaccctgcggaccaacctgtggcagcgaggaggttctaatggg
gagtcaggccccgccctgggctcccagttggctggcttccagagagacctgagctccctg
cgcaagctggggcagtgctacagacaggcccagcataaggtatttctgcacgagaccaca
gtgaggctgatggctggagcaagtccaacgcgcacacaccagctgctggagcacagccta
cggcgccgccctcaagaccctggccacaccgctgagggcacctgcgtcctgggagagcgt
gagcgagcccatgccatcctgctggcgtgtcgtcacctccctcttcccctgctgacaccg
cctgggcaccgtgcccgcctgctggctgaggccaagcgcacattggagcgcgtcggagac
cggcgctcggtgcaggactgccagcagatcctgttacgccttggcgggggcaccaccatg
gccgcctcctga
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