Clupea harengus (Atlantic herring): 105898817
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Entry
105898817 CDS
T09045
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
105898817 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898817 (srebf1)
04131 Membrane trafficking [BR:
char04131
]
105898817 (srebf1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
105898817 (srebf1)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105898817 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
105898817 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
105898817
NCBI-ProteinID:
XP_031426222
Ensembl:
ENSCHAG00000011109
UniProt:
A0A6P8FSY4
LinkDB
All DBs
Position
1:complement(19657653..19674795)
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AA seq
1151 aa
AA seq
DB search
MNNLSFDDPSLDNLDPSLSLNDPSDIDTALLNDIDDMLQLINNQDMEFGSLFDHPQFGSG
PPLAPDPPALPLISTAPSVPASSPSPPSSSTTSTTSSILSSSPHLDALLGPPISRSSPSP
DKLFQQPTFQQAPLAQVTAAPASTRPKQTVAPQVQAASTPAPAPGPLLAGKITPYSPPNP
QALFSSPSTPQQQPQQLVFPAHSAYQAVNQVSTPQVVTSLTTTPQSVRPVTIQAQVQSLP
TPTMLTTTSTMPTHTISQHVQQVLLQPQFIKADSLLLTTLKPDHGTMVTTMATPICTSLT
STTAPIQGTSLQALMSGGTILTTMPLVMDTDKMPINRIAICGKPGFQPPKGEKRTAHNAI
EKRYRSSINDKILELKDLVAGTEAKLNKSAVLRKAIDYIRYIQQTNQKLKQENMALKMST
QKNKSLKDLVAMEVDGPKVEVKNELPTPPPSEGGSPDNSPFSHCGSDSEPDSPMVEDSKM
EHAASGSAGMLDRARMALCVFTFLFLSFNPLSALVCGSDATSSSATAGGHGSGRNMLGLD
SAAESQGWLDWMLPALLVWMLNGVLVVGVLVRLLVYGEPVTRPHSGSSVLFWRHRKQADL
DLARGDFAQASQNLWTCLKALGRPLPISQLDQVCAALWAGLRLCLQRLWVGRWLAARAGG
RLRHNRPLQEDARKSSRDAALVYHRLHQLHMTGKLCGSHLEAIHMALSAVNLAECARDCL
PVATLAEIYVSAALRVKASLPRILHFTSRVFLSSARQACLSPSGSVPPAMQWLCHPLGHR
FFIDGDWTVRSSPRESIYSQAGNSVDPLAQVTQAFREHLLEKALYCVAQPRGEKPTNEGE
GEYSDSLEYLQLLTSASDAAGATTQCFAIGSNMAIVTGCDPHSKWWSSLAIVFINWLQGD
DVAAERLYPAVEHLPRSLQASESPLPKAALSVFRAVRTLLAKPENCQLSLSYCERASGLL
RDSLNLGPNCHCSAIDKVVQLLLCDLLLVTRTNVWRAVQAQGAPVTTTASQQASPAELHG
FQQDLSSLRKLAQSFRPAMRRLFLHEATARLMAGASPTRTHQLLDRSLRRRTTPGAKTEE
CETRPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLADAARTLEKLGDKRTLHDCQQMII
KLGSGTTVTST
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaataacttatcgtttgacgatccctcgttggataatttggatccaagtctatcactg
aatgatcccagtgatattgacacggctctactgaacgatattgatgatatgctccagctc
atcaacaaccaggacatggagtttggcagcctgttcgaccatcctcagtttggctcgggg
ccgcccctcgccccggacccaccggcgctgccccttatcagcaccgctccgtcggtcccg
gcctcctccccctctcccccctcctcgtccaccacctccaccacgtcctccatcctgagt
agcagcccccacctggatgccctgcttggcccccccatctcgcgcagctccccctccccg
gacaagctcttccagcagcccaccttccagcaggcccctcttgcccaggtgaccgctgcc
ccagcatccacgcgcccaaagcagacggtcgcccctcaggtccaggccgccagcacgcct
gcgcccgctccgggccccctgctcgcggggaagataacgccctacagcccccccaacccc
caggccctcttcagttcgccctcaacccctcagcaacaaccgcagcagctggtcttccct
gcccatagtgcataccaagcggtgaaccaggttagcactcctcaggtggtcaccagcctg
accaccacgccccagagtgtccgccccgtgaccatccaggcccaggtgcagagcctgccc
acccccaccatgctcaccaccacctccaccatgcctactcacaccatctcccaacacgtg
caacaggtcctgctgcagccgcagttcatcaaggccgactccctgctgctcaccaccctc
aagccagaccacggcaccatggtgaccaccatggccacgcctatctgcacctctttgacc
tccaccaccgcgcccatccagggcacctcgctacaggctctaatgagcggaggcaccatc
ctcaccacgatgccgctcgtcatggacacggacaagatgcccatcaaccgcatcgccatc
tgcgggaagcctggattccagccgcccaagggcgagaagcgcaccgcgcacaacgccatc
gagaagcgataccgctcctccatcaacgacaagattctggagctcaaagacctggtggcc
ggcaccgaggccaagctcaacaagtctgctgtgctgcgtaaggccatcgactacatccgc
tacattcagcagaccaaccagaagctcaagcaggagaacatggcactcaagatgtccacc
cagaagaacaagtccctgaaggaccttgttgccatggaggtggatgggcccaaggtggaa
gtcaagaacgagctgcccacacccccaccctcggagggtggttcccctgacaacagcccc
ttctcccactgcggcagtgactcagagcccgactcccccatggtggaggacagcaagatg
gagcatgctgcatcaggcagtgcagggatgctggaccgtgcccgtatggccctgtgtgtc
ttcaccttcctcttcctctccttcaaccctctctctgccctggtgtgtgggagcgatgcc
accagctcctcggccaccgctggggggcacggctcgggcaggaacatgctgggcttggac
agtgcagcggagtctcagggctggctggactggatgctgcccgccctcctggtgtggatg
ctcaacggggttctggtggtgggggtcctggtccggctgctggtctacggagagcccgtc
accagaccccactctggctcctccgtgctcttctggaggcatcgcaagcaagctgatttg
gatctcgctcggggtgacttcgctcaggcctcccagaacctgtggacatgcctgaaggcg
ctgggccgaccgctgcccatctctcagctggaccaggtgtgcgcggcgctgtgggccggc
ctgaggctgtgcctgcagcgcctgtgggtgggccgctggctggccgccagggccgggggc
cgcctgcgccacaaccgccccctgcaggaggacgcgcgcaagagcagccgggacgccgca
ctggtctaccaccgcctgcatcagctgcacatgaccggtaagctgtgtgggagccacctt
gaggccatccacatggccctgagtgctgtcaacctggcggaatgtgccagagactgcctg
cctgtggccacactggccgaaatctacgtgtccgctgccctgcgcgtcaaggctagcctt
cccaggatccttcacttcacctcaagagtgttcttgagcagtgcgcggcaggcctgtctg
tctcccagcggcagtgtccccccagccatgcagtggctctgtcaccccctgggccaccgc
ttcttcatagacggggactggaccgtgcgcagctccccccgtgagagcatctacagccag
gccggaaactcagtggaccccctggcccaggtgactcaggccttccgggagcacctgctg
gagaaggccctgtactgcgtggcccagccgcgtggagagaagcccaccaatgagggcgag
ggtgagtactctgattctcttgagtaccttcagctactgaccagcgcttcagatgctgct
ggagccacaacccagtgttttgctatcggctccaatatggctattgttacaggttgtgac
cctcactccaagtggtggtcgtctctggccatcgtgttcattaactggctgcagggcgat
gacgtcgcagccgagaggctctacccagccgtggagcacctgccccgcagcctacaggca
tcagagagcccactgcccaaagcagccctgagtgtgttcagagcagtgcgcaccctgctg
gccaaaccagagaactgccagctgagcctgagctactgcgagcgagccagtggcctgctg
cgagacagcctcaacctggggcccaactgccactgcagcgcaatagacaaggtggtgcag
ttgctgctgtgtgacctgctgcttgtcacgcgcactaacgtgtggcgggcggtgcaggcc
cagggtgccccagtgacgaccacggcctcccagcaggcgtctccggccgagctgcacggc
ttccagcaggacctcagctccctcaggaagctcgcccagagcttcaggcccgccatgcgc
aggttgttcttgcacgaggctacagcccgcctgatggcaggggccagccccactcgcaca
caccagctcctggaccgcagcctgagacgccgcaccactcctggagccaagacagaggag
tgtgagacgcgaccaggccagcgggagcaggcggaggcggtgatgttggcgtgccgctat
ctgccaccctccttcctgtcggcccctgggcagcgtgtgggtatgctggcggacgctgcc
cgcaccctggagaagctcggggacaagcgcaccctccacgactgccagcagatgatcatc
aaactgggcagtggcaccacagtcacctccacctaa
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