Clupea harengus (Atlantic herring): 105898855
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Entry
105898855 CDS
T09045
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105898855 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105898855 (nup85)
03036 Chromosome and associated proteins [BR:
char03036
]
105898855 (nup85)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105898855 (nup85)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105898855 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
105898855
NCBI-ProteinID:
XP_012681411
Ensembl:
ENSCHAG00000008801
UniProt:
A0A6P3VU64
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All DBs
Position
1:complement(19062044..19071539)
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AA seq
653 aa
AA seq
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MEEVDVEPTITFIPGVNSQQNHLGFVWGPGDILVYETSHKAAGKQPLGPSCQDVQVVRKD
EDIYSPILRKLFNESHHIFVGLQNIRDDLPSKNKKPQFVSISKNYRSVIRACMEELQQIA
VSTRDLALAAQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKAEVDEK
ARDVLRCESPTRHQFFWDVVISFVLQGRMEEARSMLAKQAALQPAAQTMFKRMDNLLLKM
PIYNPSSTQTLTEFEVKWRQWHEECDACLQDSSFASNPHLETICKILVGDDDTLLEHKEL
LSTWYHYVVTRLLYTHPTVKPIDLHYYAQMCMDRFLDSRSPPEPLDSILLAAFEFDLHQV
IKDCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLA
VDYFDHCQGFGRVYLELLIERVPLDTERKALKVLRICEKRQMNEQVRSICKIMAKRALRN
NRLGSALSWSIRAKDAAFATLISERFLQDYCSRGTFSDLDLIDNLGPAMLLSDRLTFLGK
YREFHRLYGEKRFTEAAKLLLSLMTAKIAPQSFWMTLLIDALPLLEQKEVIFSVDQTHEL
MFCLEELTSGKAQPNPDRPMQEEDLETTKIELLRLALARNLAMAIVKEGTVEV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagatgtagagccaacaattactttcatcccaggagtaaactcgcaacaa
aaccaccttggcttcgtatggggacccggagacatcctagtgtatgagacaagtcacaaa
gccgcaggtaaacaaccactgggaccgagctgtcaagatgtccaggtggtgaggaaagat
gaggacatatattccccaattttgcgcaagcttttcaatgagtcccatcacatctttgtt
ggactacagaatatcagagatgatttaccaagcaaaaacaaaaagccccaatttgtcagt
atcagtaaaaactataggtcggttataagagcctgcatggaagagctccaacaaattgca
gtgtcaacacgagaccttgcacttgctgcgcagtatggcaaccaggtgtctattcttctg
gctgtggaactcatatggaacctctgtgaggtgctgttcattgacgccgctccagctggc
tccttgctgctgcatctgttggactgggtgcggctccacaaggcggaggtggatgagaag
gccagggacgtcctgcgctgtgaaagtcccactcgccaccagtttttctgggatgtggta
attagctttgtgctgcaggggaggatggaggaggctcggtctatgctagccaaacaggcc
gcactgcagcccgctgcacagaccatgttcaagcgcatggacaacctacttctgaagatg
cccatttacaaccccagcagcacacagacgctgacggagttcgaggtgaagtggaggcag
tggcatgaggagtgtgacgcctgcttgcaggatagctcctttgccagcaacccccacctg
gagaccatttgtaagatcctggtgggtgatgatgacacgctcctggagcacaaggagctg
ctgagcacctggtatcactacgtggtgaccagactactctacactcaccccacagtcaag
cccatcgacctacactactacgcacagatgtgcatggacaggtttctggactcccggagt
ccccctgagcccctggacagtattcttcttgcagcttttgagtttgaccttcaccaggtc
ataaaagactgcagcattgctctcaacaactggtggtttgtggcccacttaactgaccta
ttggatcactgcaagctgctgcagtctcacaacctacactttggctccaacctgagggag
tttctgctcctggagtacgcctcgggtctgttcacacatcacagtctgtggcaactggcg
gtggactatttcgaccactgccagggatttgggagggtgtacctggagctgctcattgag
cgtgtgcccctggacacggagcggaaggccctgaaggtgctgcgcatctgtgagaagagg
cagatgaacgagcaggtgcggagcatctgtaagatcatggccaagcgggcgctccggaac
aaccggctcggctctgccctgtcctggagcatccgggccaaagatgctgccttcgccacg
ctcatttcagaaaggttccttcaggactactgctcccgcggaacgttctccgacctggac
ctgattgacaacctggggccagctatgctgctgagtgacaggctcaccttccttggtaag
taccgggagttccacaggctgtatggagagaagcgcttcacggaggccgccaagctcctg
ctgtccctcatgactgctaagatagcccctcagagcttctggatgaccctgcttatcgat
gccctgccgctgctcgaacagaaagaggtgatcttctcagtggaccaaacacatgagctt
atgttctgcttggaggagctgacctctggaaaggcccagccaaaccctgaccgacccatg
caggaggaagaccttgagacgacaaagattgagctcctcaggttggcgctggctcggaac
ctcgccatggcaattgtgaaggagggaacagtggaggtctga
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