Clupea harengus (Atlantic herring): 105898864
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Entry
105898864 CDS
T09045
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
105898864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105898864
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105898864
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
105898864
NCBI-ProteinID:
XP_012681425
Ensembl:
ENSCHAG00000008557
UniProt:
A0A6P3VVG1
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Position
1:complement(21062449..21103971)
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggttccgagtccgccccctcccgcggagatgtccagcggccctgtggccgaa
agctggtgttacactcagatcaaagtggtgaagttctcctatatgtggaccatcaacaac
ttcagcttctgtcgagaggagatgggcgaggtcatcaaaagctccaccttctcttcggga
gccaatgacaaactgaaatggtgcttgcgcgttaaccccaaggggctggatgaggagagc
aaggactacctgtccctctacctgctcctggtcagctgtcccaagagcgaggtccgtgcc
aagttcaagttctccatcctcaacgccaagggagaggagaccaaagccatggagagccag
agggcgtaccgcttcgtgcagggcaaggactggggcttcaagaaattcattaggcgggac
ttcctgctggatgaggccaacggactactcccagatgacaagctcaccttgttttgtgag
gtgagcgtggtgcaggactctgtgaacatctcagggcagaacaccatgaacatggtgaag
gtgccggactgcaggctggcagacgagctggggggcctgtgggaacactctcgcttcact
gactgctccctctgtgtcgccgggcaggagttccaggcccataaggccatcctggcagct
cgctctcctgttttcagtgcgatgtttgagcatgagatggaggaaagtaaaaagaaccgc
gtggagattaacgacgtggaaccagaagtgttcaaggagatgatgtgcttcatctacacg
gggaaagccccaaacctggacaagatggccgacgacctgcttgcagccgctgacaaatat
gctctggagcgtctgaaggtgatgtgtgaggacgccctgtgtacgagtctgtcagtggag
aacgccgctgagatcctcatcctggccgacctgcacagcgccgaccagctcaaaacacag
gctgtcgacttcatcaactaccatgcgtcagatgtgatggagacctccggctggaagtcg
atggtggcgtcccaccctcacctggtggccgaggcctaccgctccctggcttcagcccag
tgccccttcctgggcccgccccgcaagcgcctcaagcagtcctag
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