Clupea harengus (Atlantic herring): 105898944
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Entry
105898944 CDS
T09045
Symbol
foxc1a
Name
(RefSeq) forkhead box C1-A
KO
K09396
forkhead box protein C
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898944 (foxc1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
105898944 (foxc1a)
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
Motif
Other DBs
NCBI-GeneID:
105898944
NCBI-ProteinID:
XP_012681510
UniProt:
A0A6P3VUC7
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Position
25:12267166..12269353
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AA seq
477 aa
AA seq
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MQARYSVSSPNSLGVVPYIGSEQSYYRAAAGGGYTGMPAPMSMYSHAAHDQYPASMARAY
GPYTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQN
SIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDALKEKE
DRQVKDTPSRQQQQSGREQEQPVQSSQPVRIQDIKTENGTATPPQAVSPSLNTVPKIESP
DSSSMSSGSPHSIPSNRSIGLENSEQQHHHQHGQAPAQGFSVDNIMTSLRGSPQGASELT
PSLIASSRTGITPSLSLNYSPNQTSVYSSPCNQNSISTTSNATYHCNMQAMSLYAGDRSG
HLAATTTVDETLPDYSITTTTSSLNHGNLSSGQEGHHPHQGRLASWYLNQAGEMGHLGAT
YPSQQQNFHSVREMFESQRIGLNNSPVNGNNSCQMSFPPSQSIYRTSGAFVYDCSKF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcgctactccgtttcgagcccgaactctctgggcgttgtgccctacattggc
agcgagcaaagctactaccgggccgcggctggtgggggttacacagggatgccggccccg
atgagtatgtactcccacgctgctcatgaccagtaccccgccagcatggcgagggcttat
ggaccgtacaccccacagccccagcccaaggatatggtcaaaccgccatatagctacatc
gcgctcatcaccatggccattcaaaattctccggacaagaaggtgactctgaatgggatt
tatcaatttataatggagaggtttcctttctacagagacaacaagcaggggtggcaaaat
agcatccgacacaatctctccctcaatgagtgctttgtcaaagttccacgagacgacaaa
aaacctggtaagggcagctattggaccctggacccagattcttacaacatgtttgaaaac
gggagcttcttgaggcgacggcggcgttttaaaaagaaggacgcgctgaaggaaaaggag
gaccggcaggtaaaggacacgccgtcccgacaacagcagcagtcaggtcgggagcaggag
cagcccgtccagagctcacagccggtccgcattcaggacattaagactgagaacggcacc
gcaacacccccacaggctgtctctccctcacttaatacagtgcccaagattgagagccct
gacagcagcagtatgtccagtggcagcccacacagcatcccctccaaccgctcgatcggc
ctggagaactctgagcagcagcaccaccaccagcatggccaggcccctgcgcagggcttc
agtgtggacaacataatgacgtcccttcggggctcacctcaaggagccagcgagctcaca
ccctctctcatcgcctcatctcggacaggtataactccatctttgtcccttaactattct
cccaaccagacgtccgtctatagttcaccatgcaatcaaaactcgatctccactacctcg
aacgcaacctatcattgcaatatgcaggccatgagtttgtacgctggggaccgctctgga
catctagcggcgacaaccaccgtggacgaaacgttgcctgattactccattacgacgacc
acctcctcgctgaatcatggcaatctatcttcgggccaggaaggccatcacccgcaccaa
gggcgcctcgcttcatggtacctaaaccaagccggagaaatgggccatctcggcgcaacg
tacccgagccaacagcagaacttccattctgtccgagagatgttcgaatcccaaagaatt
ggcttgaataattctccggtgaacgggaataacagctgtcaaatgtctttccccccaagc
cagtccatttatcgtacgtcgggggcttttgtctatgactgcagcaagttctga
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