Clupea harengus (Atlantic herring): 105899032
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Entry
105899032 CDS
T09045
Symbol
ccdc22
Name
(RefSeq) coiled-coil domain-containing protein 22
KO
K23343
coiled-coil domain-containing protein 22
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105899032 (ccdc22)
04121 Ubiquitin system [BR:
char04121
]
105899032 (ccdc22)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Others
Others
105899032 (ccdc22)
Protein recycling
CCC complex
105899032 (ccdc22)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
105899032 (ccdc22)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
DUF8567
YEL043W_helical
PUMA_CC
LYRM2-like
DUF2730
Rv0250c
Hemerythrin
CCDC39
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
105899032
NCBI-ProteinID:
XP_012681609
Ensembl:
ENSCHAG00000025621
UniProt:
A0A6P3VUS1
LinkDB
All DBs
Position
4
Genome browser
AA seq
639 aa
AA seq
DB search
MEEVDRILIHSLRQVGTDVGEDVESVKQFTSELIVEAVVRCLRVIDAALGSGLSHLLPPG
MSARFRLGMSLAQACQDLGYKGEIGYQTFLYSNEPEIRSLLMFLVEKLPRESAEASDQPA
GKSVLLQKAIADQIKAQLAVPWLPPTCRLPLQCRTQSRGPCHRFSSQPLSVPYSLKVPQN
KQPKEVKEYYRDFLLVVTAQPSKRISVPASLLEHHASELSAAQEWESEWNSQGLLSRLTP
KEYRSRKRSRLQRRIEEQLQAAAQPRPDSQGAQRSTSDLAELLQSFGGAAAGGDVLNKGT
RFTHTEKFTFTQEPEKSAQQMAAAVSSLPSSHQSEEDLRVQQQEEISTLQQQLHQLSVQM
EEVGGDMRQLTTSINQVSEELKELEKSKAEKEESIKVKKQSIDLLPEGQCNLDKLQNLVE
ASVKRLDSLKAQWEKHKAPLLEEQHRLKELCSNQEVETSRMLDEIKELHDKIRQSAEEAK
KKEALYKQLLTEFEKLPKDVSRSAYTMRILEIVGNIKKQKEEITKILSDTKELQKEINSL
TGKLDRTFAVTDELVFKDAKKDESVRKSYKYLAALHENCTQLIQTIEDTGTIMREIRDLE
EQIETENSKKTITNLEKILEDYKAIRQENSTLASKIKEA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttgacagaattttgattcattcgctcaggcaggttggcacggatgtggga
gaggatgtggagagtgtaaagcagttcaccagcgagctgatcgtggaggctgtggtgcga
tgcctgcgtgtcatcgatgctgcgctgggcagcggcctctcccatctgctgccccctggg
atgtctgcccgcttccgtctgggcatgagtctagcccaggcctgtcaggacctgggctat
aagggggagattggctaccagacgttcctctacagcaatgaaccagagatccggtccttg
cttatgttcctggtggagaagcttcctagagaaagtgcagaggcctccgatcagcctgca
ggtaagtcagtgctcttgcagaaggccattgctgatcagatcaaagcgcagctggctgtt
ccatggctcccccctacctgtcgactgcctctccagtgcagaacacagagccggggtcca
tgtcacaggttttcctcacagcctctgagtgtaccttattctctcaaagtaccacagaac
aagcagcccaaagaggtcaaggagtactacagggacttcttgctggtggtgactgcccag
ccttccaagcgtatctcagtgcctgcctccctgttggagcaccatgcctccgagctcagt
gccgcccaggagtgggagtcggagtggaacagccaaggcctcttgtcccgactcacaccc
aaggaatatcgctccaggaagcgatcccgtctgcagcggcggattgaggagcagctccaa
gcggccgcacagccacgacccgactcccagggtgctcagcggtccacctctgacctcgct
gagctgctgcagtcgttcggcggggcagcagcgggaggagacgttctcaataagggcacg
cgcttcacccacacggagaaattcaccttcacacaggagccagagaagagtgcccagcag
atggcagcagcggtcagctccctgcccagctcgcaccagtcggaggaggacttgcgggtg
cagcagcaggaggagatctccaccctccagcagcaacttcaccagctctccgtccagatg
gaggaagtgggcggtgacatgaggcagttaaccacgtccatcaatcaggtgtcagaagag
ctgaaagaactagagaagagcaaagctgagaaggaagaatcaatcaaagtgaagaaacag
tcgattgatctcctgccagagggtcagtgcaatctagacaagttgcagaaccttgtggag
gctagtgttaagaggctggacagtctcaaggcccagtgggaaaagcacaaagccccgctc
ctcgaggaacaacacaggctgaaggagctctgcagcaatcaagaggttgaaacttctaga
atgttggatgaaatcaaggagcttcatgacaaaatccgtcagtctgcggaggaggcaaag
aagaaggaggcactttacaaacagttgttaacagagtttgaaaaattgccaaaagatgtc
tcgaggtctgcatacactatgagaattctggagattgtcggcaacattaagaaacaaaaa
gaggagatcactaagattttgtcagacactaaggagttgcagaaagagattaacagcctg
accgggaagctggaccgcacgtttgccgtgactgatgagttggtctttaaggatgctaag
aaagatgaatctgtccgcaagtcttacaaatatttggcagccttacatgagaactgtaca
caactcatccagacgattgaggacacaggcaccatcatgagagagatcagagatctggag
gaacagattgagacggagaacagcaagaagaccatcaccaacctggagaagatcctggaa
gactacaaggccattcggcaagagaactccactcttgcatccaaaataaaggaggcctga
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