Clupea harengus (Atlantic herring): 105899114
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Entry
105899114 CDS
T09045
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105899114 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105899114 (capn3a)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
105899114 (capn3a)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C2: calpain family
105899114 (capn3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
105899114
NCBI-ProteinID:
XP_012681705
Ensembl:
ENSCHAG00000014753
UniProt:
A0A6P3VUM5
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Position
14:complement(7871987..7882574)
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AA seq
713 aa
AA seq
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MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFNLLKQECLQKKTLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWKRPKEISDNPEFIVGGASRTDICQGDLGDCWLLAAIVSLT
LHEKLLYRVVPIEQSFSDGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELFKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKQSQHKDSKVRLVRLRNPWGQVE
WNGPWSDNSKEWTSISKTEKEKLQHQNAEDGEFWMSFDDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACTFVVSL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKEFFLFTSSKARCKSYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQQIAGDEMEISANELKNVLNRVVSKHKEMNTEGFSLESCRSMIALMDMDG
TGRLNLQEFRHLWNKIKQWQGIFKHYDAEQTGCINSYEMRNAVNDAGFRLNNQLYDIITM
RYANESMNIDLDSFVSCLVRLEGMFRAFQAFDQDGDGMIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctatactccgtctggctttttctgcgaccggttgatccgggagagagaacgcagg
gacggggaaggatccttgagcaagcctctgcgcttcagcggacaggacttcaacctcctc
aaacaggagtgcctccagaagaagaccctgtttgaggatgacacttttccggcctccgtg
gagtccttgggatacaaagagctgggtcacaaatccaacaaagtcaagaacatcgtctgg
aagagacccaaggaaatttctgataatcccgaattcattgttggaggagccagcaggaca
gacatttgtcaaggagacctgggtgactgctggttgttggctgccattgtttctctgaca
ctccatgagaagctgctctacagagttgtcccaatagagcaaagtttcagtgatggctat
ggtggaatcttccatttccagttctggcggtacggtgattgggtggatgttgtcatcgat
gaccgcatccccaccttcaacaatcagctggtgttcactaagtctgcggaaaggaatgag
ttttggagtgcccttttggaaaaggcctatgccaagctgcatggctcctatgaggccctc
aaaggaggcaacaccacagaggccatggaggacttcactggaggagtgaccgaattctat
gaaatgaaggaagccccaaaggagctcttcaagatcatgaaaaaggccttggagaggggt
tccctcatgggctgctccatcgattctctggttcctgctcgctttgagacacgcacagtg
acagggcttgtgaaaggacatgcttactctgtgacagctgttgaagagtgtaagcagtcc
cagcacaaggactccaaagtacgcctggtgcgtctccgcaacccatggggtcaggtggag
tggaatggaccttggagtgacaactctaaggagtggaccagcatctctaaaactgagaag
gagaaacttcagcatcagaatgctgaggacggagagttctggatgtcatttgacgatttt
aagaagaattacaccaagattgagatctgtaaccttacccctgatgcactggaggatgac
aagatacacaagtggacagtgtctgtgaacgaggggcgctgggtgcgagggtgttcagca
ggtggctgtaggaactacccagatactttctggaccaatccccagtaccgtctgcgactc
ttggaagaggatgatgacccagaggacaatgaggttgcctgcacgtttgtcgtgtccttg
atgcaaaagaaccgtagaaaagagcgcaagatgggtgctaacttgttcaccataggattt
gccatctatgaggtgccaaaagagatgcacggaaataagcagcacatgcagaaggaattc
ttcctgttcacttcctcaaaggctcgctgcaagtcttacatcaatctgagggaggtgacc
cagcgttttcgactgagtccaggagagtatgtcatcgtgccttccacctatgaaccccac
caggagggcgagttcatcctccgcgtcttctctgaaaaaaggaacacctctgaggagata
gagaacaggatcgaggctgaccatccggtgccagcaccagcttcagcaggcgaggagagt
gaggaggatcagcagttccggaccatcttccagcagatagcgggggatgaaatggagatc
tcagccaatgagctgaagaatgtcctgaacagggtggtttccaaacataaggaaatgaac
acagagggctttagcttggagagctgtcggagcatgattgccctcatggatatggatggg
acaggcagacttaacctacaggagtttaggcacctgtggaacaaaattaaacagtggcag
ggaatctttaagcactatgacgctgagcagactggatgcattaacagctatgagatgagg
aatgctgtgaatgatgcaggtttccgtctcaacaaccagctgtatgacatcatcaccatg
cgctatgccaatgagagcatgaacattgaccttgacagctttgtcagctgtctggtgcgc
ctggagggcatgttcagggcgttccaggcctttgaccaggacggggatggcatgatcagg
ctcagtgttcttgagtggctccagctgaccatgtatgcctag
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