Clupea harengus (Atlantic herring): 105899159 Help Entry 105899159         CDS       T09045                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism char  Clupea harengus (Atlantic herring) Pathway char04382   Cornified envelope formation char04510   Focal adhesion char04512   ECM-receptor interaction char04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:char00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     105899159  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     105899159   09142 Cell motility    04820 Cytoskeleton in muscle cells     105899159  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     105899159  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:char04147]     105899159    00536 Glycosaminoglycan binding proteins [BR:char00536]     105899159 Exosome [BR:char04147]  Exosomal proteins   Exosomal proteins of other cancer cells    105899159 Glycosaminoglycan binding proteins [BR:char00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    105899159 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  105899159 NCBI-ProteinID:  XP_031415251 UniProt:  A0A6P8ESJ0 LinkDB All DBs Position 22:22896775..22919198 Genome browser AA seq 1437 aa AA seqDB search MLNLYTVHLSSCGCGFVLIQRLALHGVKGDRGPYGLQGNDGPKGEKGSPGAVGAPGEVVG TVDLIKGHPGIPGPPGQTGLPGPSGVDGFPGPPGLTGGGSFIHGPPGPQGPKGDPGFKGD VGDPGHAHHGKEGCPGTPGLPGLPGDPGPPGPLLPDHSCRVHHYSQTGVKGPPGPFGYDG QPGLQGDKGEPCLLCQEKDCEDLGPTGPVGPPGEPGSPGNVGLPGGPGFKGDMGFNGYPG GPGVPGAPGPPGIPGFPGPKGHGGGYGSSGLKGDRGSPGSAGRPGKDGLYGSPGHPGHKG LPGPRGDVILSCVLGLKGDQGPNGFPGRVGPQGPAGPQGPPGYGMPGYSGSKGNFGVPGF RGPPGLPGQKGEHVRQTPVQGDPGPPGRRGPPGPPGPPGEHARHQPGIGRSISRKTAQSI VSSSALDCHHFLVTVYCVSHVYVLFILLLTGYPGPAGPAAGTGPPGPKGEPGLIQSSSPG PPGHKGDKGQPGLPGPPSKGYPGRPGAPGLLGPPGEKGNAGGGGPGAAGPRGPPGVVGDP GPSGDLGPAGLPGNRGIPGFPGAPGNKGEKGAWGLPGEEGLPGACSGRGQQGPPGPTGST GPQGPPGAVGEKGSRGTTGHPGFGSPGLPGPPGLPGLRVPALQGLPGPKGAPGREGTPGT KGLTGDPGPAGIGVPGDDGTIGPPGPPGPKGSPGAPGWKGVMGADGIKGDQGDPGTPGLR RNIPSITGEPGPAGHPGLPGAKGIKGRPGQPGHGGRDGNPGPPGHAGPPGDPGNDAYSPG GPGYPGPKGSPGIIGFPGLTGMKGIPGVHGPPGLRGTPGHHGRKGEPGEATGSYGPPGQR GQKGEPGRGCTGPGLKGQKGEQGYPGSFGLPGRKGLLGDPGYLGPPGPPGEPGISGRPGS PGHHGPIGPVGVTGPPGLTGPKGMMGNTGGNGFPGRPGLKGEPGLTSYLPGLRGAKGSRG LEGDQGPPGYSRSGPSGPPGDTGPPGPPGLRGPKGPRGGSKGCRDGERGELGYPGPAGPQ GRPGPQGVAGPPGSGSKGPKGHVGSPGPSGPKGSSGSFGAPGRPGPGGSQGLSGPRGDSG PPGSPGLHGEPGSPSGNRGARGPPGRQGPPGAPGQRPPPKQIDFHIVPGAPGPKGRPGSP GPPGNAGGPGNAGRQGYPGPKGLPGYGRPGPIGFPGENGDKGSPGHTGHIGYGGPPGQKG QRGPAGAGRSGVPDSFFLARHSQSIRVPACPEGSTLLYSGYSLLFINGNERGHGQDLGTM GSCLPRFSTMPYLFCDTEQTCRYAARNDYSYWLSTEKPMPMHMHFISGDLLSEYISRCSV CETTSNVIAIHSQSAEVPFCPIGWRSLWIGFSFVMQTGVGAEGSGQPLVSPGSCLEQFRQ VPFIECHGHGTCNYYPDSYSYWLATLNPRHMFSKPVPKTVKGPFLETVISRCRVCMK NT seq 4314 nt NT seq  +upstreamnt  +downstreamnt atgcttaacttatacacagttcacctctcgagctgcggctgtggcttcgtgctcatccag cgcctcgccttacacggagtgaaaggagaccgtggcccctatggattacagggaaacgat gggccaaagggagaaaagggcagcccgggtgcagtgggggcccctggtgaggtggtgggt acagttgacctcatcaaaggccatcctggaatccctggtcctccgggacagactggatta cctggaccctcaggtgtggacggttttccagggccgcctggactcacaggtgggggatct tttatccatggtcctccgggacctcaaggacccaaaggtgacccaggatttaaaggagac gtgggtgatcctggacatgctcaccatggaaaagagggctgcccaggtactccaggactt ccagggctcccaggtgacccggggcctccagggccacttctcccagatcacagttgccgt gttcatcattacagccaaacaggagtcaaaggcccacctggtccttttggatatgatggc caaccaggattacaaggtgacaagggtgaaccttgcttgctgtgccaagagaaggactgc gaagatcttggaccaactggacccgttggaccacctggagagcctggttcccctggtaac gtcggtctgcctggaggaccaggatttaagggagacatgggttttaatggctatccaggt ggccctggagttccgggcgcacctggtccaccaggcatcccaggtttccctggacctaaa ggacatgggggaggctatggatcatcagggttaaagggagacagaggctcccctggctct gcaggcagacctgggaaggatgggttgtatggttctcctggacatccaggccacaaaggc ctaccaggccccaggggcgacgtcatactttcttgtgttctgggtctgaaaggagaccaa ggcccaaatggattcccgggtcgagtgggacctcaggggccagctggaccacaggggcca ccagggtatggaatgcctggatactcagggtcaaagggcaactttggtgtgccgggtttc agagggcccccagggttgccaggtcaaaaaggggagcacgtcagacagacccctgttcag ggagatcctggccccccaggaagaagaggcccccctggtcctcctggccccccaggtgag catgcaaggcatcagccaggcattggtcgaagcatttcaagaaagactgcacagagcatt gtcagtagtagtgcattagattgccatcactttttagtcacagtttattgtgtcagccat gtctatgtcctgtttatattattattaacaggttacccaggacctgcaggtcctgcagca ggtactggtcccccagggccaaagggagagcctggtctcattcagtcttcaagcccagga ccacctggacacaaaggggacaagggtcagccggggttgcctggaccccccagcaaggga tacccaggccgaccaggagctcctgggcttctcggaccaccaggagagaagggtaacgct gggggtgggggccctggagcagcggggccacgagggcccccaggggttgtgggggaccca gggccttctggggacctcgggccggcaggcctgcctggaaatcgcggaattccagggttt cctggagcacctgggaataaaggagaaaagggtgcttggggtttacctggtgaagaaggc ttacctggggcctgctctggacgggggcagcagggaccacctggaccgactgggtctact gggcctcaaggccctccaggcgctgtaggggagaaggggtctaggggaacgacaggtcat cctgggtttggttcaccaggcctcccaggaccccccggcctgcccggcctccgtgtaccc gcactacaaggcctcccagggccaaaaggagctccggggagagaagggactcctggcacc aaaggattgactggagatccgggtccagcagggataggagttccgggggatgatggcacc ataggaccaccaggaccaccaggacccaaaggttctccaggagcacctggctggaaaggt gtcatgggtgctgacggtataaagggggatcagggtgaccctggtaccccaggcctcaga agaaacataccgagtataacaggagaacctggtccagcaggtcaccctggcttacctggt gcaaaaggcatcaaaggacgccctggacaacctggccatggtggaagagatggaaaccca gggcctccggggcatgcagggcctcctggtgatcctggcaatgatgcgtacagtcctgga ggacctggatatcctggacccaaagggagcccagggatcattggctttcctggtctaact ggcatgaaggggatacctggtgtacatggcccacctggactgagaggcacaccgggtcac catggacgaaagggagaaccaggtgaggctacaggatcatacggcccacctggacaaaga ggccagaagggggagcctgggcggggctgcactggtccaggactgaaaggacagaaagga gagcagggatacccaggatcatttggactacctggacgcaaaggactactaggagatcct ggttacctgggaccccctggcccacctggagaaccagggatatctggtagacctggcagc ccaggacaccatggcccaattggaccagttggcgtgacaggccctcccggcctcactggt cccaagggcatgatgggaaatactgggggcaatggcttcccagggcgcccaggactgaaa ggagagccaggacttacatcctacttgcctggcttaagaggagcgaagggcagtcgagga ctcgagggtgatcaaggccctcctgggtactcaagaagtggcccgtctggacccccgggc gataccgggccaccaggccctccaggactaagaggaccaaagggtcccagaggaggtagt aaaggctgtagagatggagagaggggagaactgggctaccctggaccagccggaccacag gggcgtcccgggcctcaaggtgttgctgggcctccaggttcaggatctaaaggaccgaaa ggacacgtcggatctccaggaccttctgggcctaaaggctcttcagggagcttcggcgca ccaggaagacccggaccaggaggtagtcagggcctatcggggccgaggggtgactccgga ccgcccggatccccaggactccatggtgaacctggatcacccagtgggaatcggggtgct agaggtcctcctggtaggcaaggaccacctggagctccaggccagcggcccccaccgaag caaattgactttcatatagtgcctggtgccccgggccctaaaggaaggcctggttccccc gggccacccggtaatgcaggaggtcctggaaacgcaggacgacaaggttatccaggacct aagggcttgccaggctatgggcgtcctggacctataggtttccctggggaaaatggagac aaaggatcgcctggccacacaggccatattggctatggaggcccacctggtcagaaaggc cagcgaggccccgctggagctggacgttctggggttcctgatagcttcttcctggctcga cacagccagagcatccgtgtgcctgcatgccccgaaggcagtactctcctgtacagcgga tactcactactctttatcaatgggaacgaaagaggacatggccaggacctgggtacgatg ggtagctgtttgccccggttctctaccatgccttacctcttctgtgacacagagcaaacc tgtcgctatgctgcccgcaacgactactcctattggctgtccacagagaagcccatgcca atgcacatgcacttcatcagtggggaccttctgtcagaatacatcagcagatgctctgtg tgtgagaccacatccaatgtgatcgccattcacagccagtccgctgaagtgcccttctgt cccatcggctggcgctctctgtggatcggcttctccttcgtcatgcaaaccggtgtgggg gctgagggctctgggcagcccctggtctctcctggctcctgcctggagcaattccgccag gtgcccttcatcgagtgccatggccacggcacctgtaactactaccccgactcctacagc tattggctggctaccttgaacccaaggcatatgttcagtaaaccagtgcccaagactgtg aagggtccattcttggagactgtcatcagtcgctgccgtgtctgcatgaagtag

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