Clupea harengus (Atlantic herring): 105899173
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Entry
105899173 CDS
T09045
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105899173 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105899173 (lamc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
Death
FleQ
Motif
Other DBs
NCBI-GeneID:
105899173
NCBI-ProteinID:
XP_012681774
Ensembl:
ENSCHAG00000026846
UniProt:
A0A6P3VUV7
LinkDB
All DBs
Position
25:14072915..14127763
Genome browser
AA seq
1593 aa
AA seq
DB search
MRFLRVVILLTFWAACSHCAMDECSDESARPQRCMPEFVNAAFNVTVVATNTCGSPPEEY
CVQTGVTGVTKSCHICDARDPRQHHSAVYLTDYNNQMDTTWWQSQTMLAGIQYPNSINLT
LHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCQKTYTKLNRGFIRT
GEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPTLQEWVTATDIRVTLNRL
NTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECTRNEYSKTVCNCKHNTEGDDC
QVCQPFYNDRPWRRGTAENPNECLPCNCNGKSSECYFDSELYRATGRGGHCRNCADNFDG
PNCERCLDNYYRESSGSRCLPCSCNSVGSLSTQCDATGRCSCKPGVMGDKCERCQPGYHT
LTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGFFNLDPQNPQGCTPCF
CFQHSSVCDTAEGYSVHTITSDFDRDDDQWTGQRRDATSADVQWSPSSQDISLISEDYFP
IYFVAPEKFLGGQLLSFGQNLTFSFRSDRRDTRLSAEDVVLEGAGLRVTVPLIAQGNAYP
EENVKTYVFRLHDTTDYPWRPNLGPGDFQKLLHNLTAIKIRGTYSERSAGYLDNVALTTA
RRAPGTPALWVEKCTCPQGYVGQHCEQCALGYRRANPELGLFSPCERCNCNGHSDACDPV
TGMCDCLHNTAGLSCERCKDGFYGDSTAGSSSDCKPCPCPGGATCAVVPKTREVVCTNCP
AGTTGKRCELCDDGFFGDPLGQDGPVRACRACTCSDNIDPNAVGNCNRETGQCLKCIYNT
DGFFCDRCKEGFFGSALATNPAEKCRPCSCSPYGTVDQQTSCLQVTGQCQCLPHVTNRDC
NACEPGYFNLQSGKGCERCDCSPIGSTSGQCDIESGQCECQPGVSGKQCERCEVNFFGFG
SSGCKPCDCDPEGSQTAQCKEDGRCECRPGFIGARCDMCEENYFYNRSTPGCQQCPNCYG
LVRDKVNQQRQKLHDLQTLIDNLGTSTETVSDKAFEDRLKEAEKAIMDLLEEAQSSKDVD
EGLLERLNNINSTLTTQWNRLQNIRNTVDNTGTQAEKAQKRVQDAESLIDRARQELDKAK
DAISKVDIKPLTTAGGPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKAYNLLK
KTLDGEGKTSSDIDELNKKYSEAKDLAKNLEKQANKVLAEAEVAGDKANKILSNLTTLPP
FDTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLREDLRGKESEVRKLLEKGKTEQQTAD
QLLARADAAKALAEEAAKKGRTTYQEAQDILTNLRDFDKRVNDNKTAAEEAMKRIPEINA
TIIAANEKTKQAESALGNAAADAKEAKAKAEEAEKIASSVQKGSAKTKTDAEKAFQDTTK
LDGEVNDMLNQLSAAENELEKKKAEADQDMMMASMASDNAKEAEVNARKAKSAVRMVLDT
INDLLKQLGNIDKVDLSKLEQIDGSLKQAKERMKGSLLDKKLKDLDDVAKVQEEMISGYD
QQIREIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttacgcgttgtgatcttattgactttttgggctgcatgcagccattgtgca
atggatgaatgttcggacgaatccgctcggcctcaacggtgcatgcccgagttcgtcaac
gccgctttcaatgtaaccgtggtagctaccaacacttgcggctcccctcccgaagaatac
tgcgtacagaccggagtgaccggggtcacgaagtcgtgccacatctgcgatgccagggac
cctaggcaacatcacagcgctgtgtacctcactgattacaacaaccaaatggataccacc
tggtggcaaagtcaaactatgttagcaggcatccagtatcccaactccatcaatctgacg
cttcacttgggcaaggcctttgatatcacctacgtgcgcctcaagttccacaccagccgc
ccggagagcttcgccatctacaagaggaccagggaggacgggccttgggtaccgtaccag
tactacagcggctcctgccagaagacctacaccaagttaaaccgtggcttcatccgcacc
ggcgaggacgagcagcaggcgctctgcactgacgagttcagcgacatctctcccctcacc
ggaggcaacgtggccttctccacgcttgagggacgccccagcgcctacaactttgataac
agccccaccctgcaggaatgggtgaccgccacagacatccgggtgaccctgaacaggctc
aacacgttcggagacgaggttttcaacgaccccaaggttctgaagtcctactactacgcc
atctcagactttgccgtgggtggaaggtgcaagtgcaatggccacgccagtgagtgtacg
aggaacgagtacagcaagacggtgtgcaactgcaagcacaacacagagggtgacgactgc
caggtgtgccagcccttctacaacgaccgcccctggaggagaggaacggccgaaaacccc
aacgagtgcttgccttgtaactgtaatggcaaaagttctgagtgctacttcgactcggag
ctgtaccgcgccacaggccgtggaggccactgccgtaactgcgccgacaactttgacggg
cccaactgcgagcgctgcctggataactactaccgagagtcatctggcagccggtgcctg
ccttgcagctgtaactccgtgggttctctgagcacccagtgtgacgccacggggcgctgc
agctgcaagccaggagtgatgggggataagtgcgagcgctgccagccgggttaccatacc
ctgaccgaggcaggctgcagaccctgctcctgtaacccctccggaagcacacaggagtgt
gatgtgcagacaggacgctgccagtgcaaggacaacgtggagggcttcagctgtgacagg
tgtaagctgggcttctttaacctggacccccagaacccacagggctgcaccccctgcttc
tgcttccagcactcgtccgtgtgcgacaccgccgagggctacagcgtccacacaatcacc
tccgactttgaccgcgatgatgatcagtggacaggacagcgcagggatgccaccagcgct
gacgtccagtggtcccccagctcacaagacatctcgctcatctccgaggactacttcccc
atttattttgtggctccagaaaagttcctgggcggtcagctgctgagctttggccagaat
ctcacgttcagcttccggtcagaccgtcgtgacacccgcctctcggcagaggatgtcgtg
cttgagggagccggacttcgcgtcaccgtgccacttatcgcccagggcaacgcctaccca
gaggagaatgtcaagacttacgtgttcaggctccatgacaccacagactacccatggagg
cccaaccttgggcccggtgacttccagaagcttctgcacaacctgacagccatcaaaatc
cgtggcacctacagtgaaagaagtgctggctacctcgataacgttgccctaacaactgct
cgccgagcccccggcacccctgccctctgggtagagaagtgcacatgcccccaaggctac
gtggggcagcactgcgagcagtgcgctctgggataccggagggccaatcctgagctaggc
ctcttcagcccttgtgaacgctgcaattgcaacggccacagtgatgcatgcgatccagta
accggaatgtgcgactgcctgcataacacagctggattgagctgcgagagatgcaaggac
ggtttctatggtgactctacggctggttcctcttcggactgcaagccctgcccgtgtcct
ggaggtgccacctgtgctgttgtccccaagaccagagaggtggtgtgcaccaactgcccc
gctggcaccacaggcaagcgctgtgagctgtgtgacgatggcttttttggggaccccctg
ggtcaggacgggcctgtgagggcgtgccgtgcctgcacctgcagtgacaacattgacccc
aatgctgtgggcaactgtaaccgggagacgggccagtgcctgaagtgcatctacaacacc
gacggcttcttctgcgaccgctgcaaagagggtttctttggcagcgcgctggctaccaac
cccgctgagaaatgcagaccctgctcctgctccccctacgggactgtcgatcagcagact
tcctgcctgcaggtcactgggcagtgccagtgtctcccccacgtgactaaccgcgactgc
aacgcctgtgagcccggctacttcaacctgcagagcggcaaaggctgtgaaaggtgcgac
tgcagcccgattggctcgaccagcgggcagtgtgacatcgagagtggtcagtgtgagtgc
cagcctggggtttcgggtaaacagtgcgaacgctgtgaggtcaacttcttcggcttcggc
tcgtccggctgcaaaccttgcgactgtgacccggagggctcccagacggcgcagtgcaag
gaggacggccgctgtgagtgccgccctggtttcataggagcccgctgcgacatgtgcgag
gagaactacttctacaaccgctccacgcctggctgccagcagtgccccaactgctatggc
ctggtcagggacaaggtgaaccagcagaggcagaagctgcacgacctgcagactttgatt
gacaatcttggcaccagtacggagaccgtcagtgacaaggcttttgaagaccgactcaaa
gaagccgaaaaggccatcatggacctgttggaggaggcccagagcagcaaagatgtagat
gaaggcctgttggaacgtctcaacaacatcaacagcaccctgacaacccagtggaaccgg
ctgcagaacatccgcaacacagtggacaacacaggcacgcaggcagagaaagcccagaaa
cgtgtccaggacgcggagagcctgatcgacagagcacgccaagagctggacaaggccaag
gacgccatcagtaaagtggacatcaaaccgctcactaccgcgggagggccgaacaacatg
acccttctggctgaggaagcccgcaacctggctgacaagcataaaatggatgctgatcag
atcgagaagattgccaaagacgcaaatgacacgtctaccaaggcatacaatctgttgaag
aagacactggatggcgagggaaagaccagcagtgacatcgatgaactcaacaagaaatac
agtgaagcgaaggaccttgccaagaacctggagaaacaggctaacaaagtgttggctgag
gcagaggtggcaggtgacaaggccaacaagattctgtccaacctcacaaccctgccgccc
ttcgacaccaaatcactggaggacgaggccagcaagatcaagaaggaggcatcagacctg
gacaagctcatcgacaagactgagaaggagtacaacgacctgagggaggacctgcggggc
aaggagtctgaggtccgcaagctgctggagaagggcaaaactgagcaacagacggcggat
cagctgctggcccgtgcggatgctgccaaggccctggctgaggaggctgccaagaaaggc
aggaccacgtaccaggaggctcaggacattctgaccaacctcagggatttcgataagagg
gtcaacgacaacaagacggcggcagaagaggctatgaagcgtatcccagaaatcaatgca
acgatcatcgcggccaatgagaagaccaagcaggcagaatcagcactgggcaacgcagca
gcagacgccaaggaggccaaggctaaagccgaagaagccgagaagatcgccagtagcgtg
cagaagggctcagcaaagaccaagacagatgcagaaaaggcctttcaggacactacgaaa
ctggacggcgaagtgaacgacatgttgaaccagctgtcagctgctgagaatgagctggag
aagaagaaagcagaggctgatcaggacatgatgatggccagtatggcatctgacaacgcc
aaagaagctgaggtcaatgcccgcaaagccaagagtgccgtcaggatggtcctcgacaca
atcaacgacttactcaagcagctaggcaacattgacaaggtggacctgagcaagctggag
cagatcgacggctccctgaagcaggccaaggagaggatgaagggcagtctcctcgacaag
aagctaaaggatctggacgacgtggccaaggtccaggaggagatgatcagtggctatgac
caacagatccgcgagatccgtgcagacatcgccaacctcaatgacatcaagaacacgcta
cctgagggctgcttcaacaccccgtcactggagcggccttaa
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integrated database retrieval system