KEGG   Clupea harengus (Atlantic herring): 105899173
Entry
105899173         CDS       T09045                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04510  Focal adhesion
char04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105899173 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105899173 (lamc1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B Alanine_zipper Death FleQ
Other DBs
NCBI-GeneID: 105899173
NCBI-ProteinID: XP_012681774
Ensembl: ENSCHAG00000026846
UniProt: A0A6P3VUV7
LinkDB
Position
25:14072915..14127763
AA seq 1593 aa
MRFLRVVILLTFWAACSHCAMDECSDESARPQRCMPEFVNAAFNVTVVATNTCGSPPEEY
CVQTGVTGVTKSCHICDARDPRQHHSAVYLTDYNNQMDTTWWQSQTMLAGIQYPNSINLT
LHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCQKTYTKLNRGFIRT
GEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPTLQEWVTATDIRVTLNRL
NTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECTRNEYSKTVCNCKHNTEGDDC
QVCQPFYNDRPWRRGTAENPNECLPCNCNGKSSECYFDSELYRATGRGGHCRNCADNFDG
PNCERCLDNYYRESSGSRCLPCSCNSVGSLSTQCDATGRCSCKPGVMGDKCERCQPGYHT
LTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGFFNLDPQNPQGCTPCF
CFQHSSVCDTAEGYSVHTITSDFDRDDDQWTGQRRDATSADVQWSPSSQDISLISEDYFP
IYFVAPEKFLGGQLLSFGQNLTFSFRSDRRDTRLSAEDVVLEGAGLRVTVPLIAQGNAYP
EENVKTYVFRLHDTTDYPWRPNLGPGDFQKLLHNLTAIKIRGTYSERSAGYLDNVALTTA
RRAPGTPALWVEKCTCPQGYVGQHCEQCALGYRRANPELGLFSPCERCNCNGHSDACDPV
TGMCDCLHNTAGLSCERCKDGFYGDSTAGSSSDCKPCPCPGGATCAVVPKTREVVCTNCP
AGTTGKRCELCDDGFFGDPLGQDGPVRACRACTCSDNIDPNAVGNCNRETGQCLKCIYNT
DGFFCDRCKEGFFGSALATNPAEKCRPCSCSPYGTVDQQTSCLQVTGQCQCLPHVTNRDC
NACEPGYFNLQSGKGCERCDCSPIGSTSGQCDIESGQCECQPGVSGKQCERCEVNFFGFG
SSGCKPCDCDPEGSQTAQCKEDGRCECRPGFIGARCDMCEENYFYNRSTPGCQQCPNCYG
LVRDKVNQQRQKLHDLQTLIDNLGTSTETVSDKAFEDRLKEAEKAIMDLLEEAQSSKDVD
EGLLERLNNINSTLTTQWNRLQNIRNTVDNTGTQAEKAQKRVQDAESLIDRARQELDKAK
DAISKVDIKPLTTAGGPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKAYNLLK
KTLDGEGKTSSDIDELNKKYSEAKDLAKNLEKQANKVLAEAEVAGDKANKILSNLTTLPP
FDTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLREDLRGKESEVRKLLEKGKTEQQTAD
QLLARADAAKALAEEAAKKGRTTYQEAQDILTNLRDFDKRVNDNKTAAEEAMKRIPEINA
TIIAANEKTKQAESALGNAAADAKEAKAKAEEAEKIASSVQKGSAKTKTDAEKAFQDTTK
LDGEVNDMLNQLSAAENELEKKKAEADQDMMMASMASDNAKEAEVNARKAKSAVRMVLDT
INDLLKQLGNIDKVDLSKLEQIDGSLKQAKERMKGSLLDKKLKDLDDVAKVQEEMISGYD
QQIREIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq 4782 nt   +upstreamnt  +downstreamnt
atgcgttttttacgcgttgtgatcttattgactttttgggctgcatgcagccattgtgca
atggatgaatgttcggacgaatccgctcggcctcaacggtgcatgcccgagttcgtcaac
gccgctttcaatgtaaccgtggtagctaccaacacttgcggctcccctcccgaagaatac
tgcgtacagaccggagtgaccggggtcacgaagtcgtgccacatctgcgatgccagggac
cctaggcaacatcacagcgctgtgtacctcactgattacaacaaccaaatggataccacc
tggtggcaaagtcaaactatgttagcaggcatccagtatcccaactccatcaatctgacg
cttcacttgggcaaggcctttgatatcacctacgtgcgcctcaagttccacaccagccgc
ccggagagcttcgccatctacaagaggaccagggaggacgggccttgggtaccgtaccag
tactacagcggctcctgccagaagacctacaccaagttaaaccgtggcttcatccgcacc
ggcgaggacgagcagcaggcgctctgcactgacgagttcagcgacatctctcccctcacc
ggaggcaacgtggccttctccacgcttgagggacgccccagcgcctacaactttgataac
agccccaccctgcaggaatgggtgaccgccacagacatccgggtgaccctgaacaggctc
aacacgttcggagacgaggttttcaacgaccccaaggttctgaagtcctactactacgcc
atctcagactttgccgtgggtggaaggtgcaagtgcaatggccacgccagtgagtgtacg
aggaacgagtacagcaagacggtgtgcaactgcaagcacaacacagagggtgacgactgc
caggtgtgccagcccttctacaacgaccgcccctggaggagaggaacggccgaaaacccc
aacgagtgcttgccttgtaactgtaatggcaaaagttctgagtgctacttcgactcggag
ctgtaccgcgccacaggccgtggaggccactgccgtaactgcgccgacaactttgacggg
cccaactgcgagcgctgcctggataactactaccgagagtcatctggcagccggtgcctg
ccttgcagctgtaactccgtgggttctctgagcacccagtgtgacgccacggggcgctgc
agctgcaagccaggagtgatgggggataagtgcgagcgctgccagccgggttaccatacc
ctgaccgaggcaggctgcagaccctgctcctgtaacccctccggaagcacacaggagtgt
gatgtgcagacaggacgctgccagtgcaaggacaacgtggagggcttcagctgtgacagg
tgtaagctgggcttctttaacctggacccccagaacccacagggctgcaccccctgcttc
tgcttccagcactcgtccgtgtgcgacaccgccgagggctacagcgtccacacaatcacc
tccgactttgaccgcgatgatgatcagtggacaggacagcgcagggatgccaccagcgct
gacgtccagtggtcccccagctcacaagacatctcgctcatctccgaggactacttcccc
atttattttgtggctccagaaaagttcctgggcggtcagctgctgagctttggccagaat
ctcacgttcagcttccggtcagaccgtcgtgacacccgcctctcggcagaggatgtcgtg
cttgagggagccggacttcgcgtcaccgtgccacttatcgcccagggcaacgcctaccca
gaggagaatgtcaagacttacgtgttcaggctccatgacaccacagactacccatggagg
cccaaccttgggcccggtgacttccagaagcttctgcacaacctgacagccatcaaaatc
cgtggcacctacagtgaaagaagtgctggctacctcgataacgttgccctaacaactgct
cgccgagcccccggcacccctgccctctgggtagagaagtgcacatgcccccaaggctac
gtggggcagcactgcgagcagtgcgctctgggataccggagggccaatcctgagctaggc
ctcttcagcccttgtgaacgctgcaattgcaacggccacagtgatgcatgcgatccagta
accggaatgtgcgactgcctgcataacacagctggattgagctgcgagagatgcaaggac
ggtttctatggtgactctacggctggttcctcttcggactgcaagccctgcccgtgtcct
ggaggtgccacctgtgctgttgtccccaagaccagagaggtggtgtgcaccaactgcccc
gctggcaccacaggcaagcgctgtgagctgtgtgacgatggcttttttggggaccccctg
ggtcaggacgggcctgtgagggcgtgccgtgcctgcacctgcagtgacaacattgacccc
aatgctgtgggcaactgtaaccgggagacgggccagtgcctgaagtgcatctacaacacc
gacggcttcttctgcgaccgctgcaaagagggtttctttggcagcgcgctggctaccaac
cccgctgagaaatgcagaccctgctcctgctccccctacgggactgtcgatcagcagact
tcctgcctgcaggtcactgggcagtgccagtgtctcccccacgtgactaaccgcgactgc
aacgcctgtgagcccggctacttcaacctgcagagcggcaaaggctgtgaaaggtgcgac
tgcagcccgattggctcgaccagcgggcagtgtgacatcgagagtggtcagtgtgagtgc
cagcctggggtttcgggtaaacagtgcgaacgctgtgaggtcaacttcttcggcttcggc
tcgtccggctgcaaaccttgcgactgtgacccggagggctcccagacggcgcagtgcaag
gaggacggccgctgtgagtgccgccctggtttcataggagcccgctgcgacatgtgcgag
gagaactacttctacaaccgctccacgcctggctgccagcagtgccccaactgctatggc
ctggtcagggacaaggtgaaccagcagaggcagaagctgcacgacctgcagactttgatt
gacaatcttggcaccagtacggagaccgtcagtgacaaggcttttgaagaccgactcaaa
gaagccgaaaaggccatcatggacctgttggaggaggcccagagcagcaaagatgtagat
gaaggcctgttggaacgtctcaacaacatcaacagcaccctgacaacccagtggaaccgg
ctgcagaacatccgcaacacagtggacaacacaggcacgcaggcagagaaagcccagaaa
cgtgtccaggacgcggagagcctgatcgacagagcacgccaagagctggacaaggccaag
gacgccatcagtaaagtggacatcaaaccgctcactaccgcgggagggccgaacaacatg
acccttctggctgaggaagcccgcaacctggctgacaagcataaaatggatgctgatcag
atcgagaagattgccaaagacgcaaatgacacgtctaccaaggcatacaatctgttgaag
aagacactggatggcgagggaaagaccagcagtgacatcgatgaactcaacaagaaatac
agtgaagcgaaggaccttgccaagaacctggagaaacaggctaacaaagtgttggctgag
gcagaggtggcaggtgacaaggccaacaagattctgtccaacctcacaaccctgccgccc
ttcgacaccaaatcactggaggacgaggccagcaagatcaagaaggaggcatcagacctg
gacaagctcatcgacaagactgagaaggagtacaacgacctgagggaggacctgcggggc
aaggagtctgaggtccgcaagctgctggagaagggcaaaactgagcaacagacggcggat
cagctgctggcccgtgcggatgctgccaaggccctggctgaggaggctgccaagaaaggc
aggaccacgtaccaggaggctcaggacattctgaccaacctcagggatttcgataagagg
gtcaacgacaacaagacggcggcagaagaggctatgaagcgtatcccagaaatcaatgca
acgatcatcgcggccaatgagaagaccaagcaggcagaatcagcactgggcaacgcagca
gcagacgccaaggaggccaaggctaaagccgaagaagccgagaagatcgccagtagcgtg
cagaagggctcagcaaagaccaagacagatgcagaaaaggcctttcaggacactacgaaa
ctggacggcgaagtgaacgacatgttgaaccagctgtcagctgctgagaatgagctggag
aagaagaaagcagaggctgatcaggacatgatgatggccagtatggcatctgacaacgcc
aaagaagctgaggtcaatgcccgcaaagccaagagtgccgtcaggatggtcctcgacaca
atcaacgacttactcaagcagctaggcaacattgacaaggtggacctgagcaagctggag
cagatcgacggctccctgaagcaggccaaggagaggatgaagggcagtctcctcgacaag
aagctaaaggatctggacgacgtggccaaggtccaggaggagatgatcagtggctatgac
caacagatccgcgagatccgtgcagacatcgccaacctcaatgacatcaagaacacgcta
cctgagggctgcttcaacaccccgtcactggagcggccttaa

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