Clupea harengus (Atlantic herring): 105899223
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Entry
105899223 CDS
T09045
Symbol
tfr1a
Name
(RefSeq) transferrin receptor 1a isoform X1
KO
K06503
transferrin receptor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03273
Virion - Lassa virus and SFTS virus
char04144
Endocytosis
char04145
Phagosome
char04216
Ferroptosis
char04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105899223 (tfr1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105899223 (tfr1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105899223 (tfr1a)
04145 Phagosome
105899223 (tfr1a)
09143 Cell growth and death
04216 Ferroptosis
105899223 (tfr1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105899223 (tfr1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105899223 (tfr1a)
04090 CD molecules [BR:
char04090
]
105899223 (tfr1a)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
105899223 (tfr1a)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105899223 (tfr1a)
Exosomal proteins of colorectal cancer cells
105899223 (tfr1a)
CD molecules [BR:
char04090
]
Proteins
105899223 (tfr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
Peptidase_M28
TFR_dimer
Motif
Other DBs
NCBI-GeneID:
105899223
NCBI-ProteinID:
XP_012681834
Ensembl:
ENSCHAG00000021653
UniProt:
A0A6P8ETU1
LinkDB
All DBs
Position
22:23267631..23282026
Genome browser
AA seq
778 aa
AA seq
DB search
MDQARTTISKIFNGEPRSYTRFSLTQNMEGGDSQVEMKLSPEVEEELESNGVGEHLHHHP
ESYRRKPQRTPKNICFLVAATLLVVIIGYLIGYLVHRKQDKASPTCDRAVSVSTDEESSQ
PESFAPKQLDWGEVKGMLGDKLTVSRIEASLSEFASVDHRAGSPGDEALANKVLRRFQEN
NMKTWNDEHYVKLQAPPTSGSNTVTFRGQSLGSIQGYLAYSATGKAEGAVLYAYYGRLED
FADLKDLSIDLNGKIILVRAGEISFAEKVDNAAKMNASGVLIYPDPADYDLSDTTQLFGH
VHLGSGDPYTPGFPSFNHTQFSPVRSSGLPSIIAQTITPIMAQTLMRGMEGRNTPRSWKD
GGLSGVLYKLGDLSDIVSVEVNNVLVETKIHNVFGVIKGVTDADRYVVIGAQRDAWGPGF
AKSTVGTALLVELAKAISEMIREGRFMPRRSLVFASWTAGEYGNIGATEWLEGYLPSLSM
KAYSYISLDGVVTGSDTFKASASPLMNGLISDTLKEVNSVSNPGKTLYALASGPSWETSV
LEPLKMTNPAYPFITFSGIPSVSFRFTKSQGSEEYPYFGTLYDTREKLESATFSNLPKVV
RAAGQVAGHMALRLVHDHLLRLSVGAYDKIIRGHVIQINKKVNTLQESGRLPNNFTSKWL
ISAIGSYGRGARALVDTIDNSDLEDTEQCRMLNDRIMRVEADLLSPYVSPTKTPFRHILL
GLGPHTFTALVDHLDVLKSSVGSDDVDKLLNQFALASWTLQACSNALAGEVWDMNNNI
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagccaggacaacgatatccaaaatattcaacggggagccccgctcatacaca
cgcttcagcctgacccagaacatggaggggggcgacagccaagtggaaatgaaactctcc
cctgaggtggaggaagagttggaaagtaacggggtgggggagcacctacaccaccaccca
gagtcctaccggcgaaagccacaacgcacccccaaaaacatctgcttcctggtcgcggcc
actctgctcgtcgtcatcattggctatctaattggatacttggttcatcggaagcaggat
aaggcctcaccaacttgtgaccgtgccgtcagtgtgtctacggatgaagaaagcagtcag
cctgaatcatttgcacctaaacaactagactggggcgaggtcaaaggcatgctaggagac
aagctgacagtcagccggattgaggccagtctgagtgagtttgccagtgttgaccaccgg
gctggatcccctggtgatgaggcactagccaacaaagtgctgaggaggttccaggagaac
aacatgaagacctggaatgatgagcactacgtgaagctgcaggctccacctacctctggt
tccaacacggtcacgttccgtggccagagcctgggctccatccaaggctacctggcctac
agtgccactggaaaagcagagggtgctgttttgtatgcttactatggacgattggaagac
tttgctgacctgaaagacctgagcattgacctgaatgggaagatcatcctggtcagagct
ggagaaataagttttgcggagaaggtggataatgctgcaaaaatgaacgcaagtggtgtc
ctgatctaccctgacccagctgactatgaccttagtgatacaactcagctgtttggccat
gtgcatcttggctcaggtgatccctacacaccaggcttcccgtcattcaaccacacccag
ttctcccctgttcgctcttctggcttgcccagcatcatagcccagaccatcactccaatc
atggcccaaactctgatgaggggtatggagggacggaatactccccgcagctggaaagac
ggcgggctgtctggagtgctgtacaagctgggagatctcagcgatattgtatctgtggag
gtgaacaatgtcctggtggagacaaagattcacaacgtgtttggtgtcatcaagggtgtc
accgatgcagaccgctatgttgtgattggagcgcagagagatgcgtggggccctggcttt
gctaagtcaactgtgggcactgctttattggtggaattggccaaggccatcagcgaaatg
atcagagaaggcagattcatgcccaggagaagtttagtctttgccagctggactgctggt
gaatatggtaatattggcgccaccgagtggttggagggctatttgccatctctgagtatg
aaggcgtactcctacatcagcctggacggagtagtaacaggttctgacacctttaaagca
agtgcaagccccttgatgaacggcctcatttcagacacactgaaggaggtgaacagtgtc
agtaaccctggaaaaacattatatgcgctagcgtcagggcccagctgggagacatcagtt
ctggagcctctgaagatgacaaaccctgcctacccgttcataactttttctgggattcca
tctgtttccttccggtttactaaaagccagggctcggaggagtatccttacttcggtacc
ctgtatgacacaagagagaagctggaatccgccaccttctcaaacttgcccaaggtcgtc
cgggccgcagggcaggtcgctggtcacatggccctcaggctggtacacgaccatctgctc
aggctgagtgttggggcatatgataagatcatccgtggccatgtcatccagatcaataaa
aaagtcaacacgctgcaggagtctggccgtctacccaacaacttcacctccaagtggctc
atctcagccataggctcgtatggccgtggtgcccgcgccctcgttgacaccatcgacaac
agtgacctggaggacacagagcagtgtcgcatgctgaacgaccgcatcatgcgggtggaa
gccgatctcctgtccccatatgtttctccgacaaagaccccattccgccacatcttgcta
ggcttgggcccgcacacgttcactgcccttgtggaccacctggatgtgttgaagagctca
gtagggagtgatgacgtggacaagcttctgaaccagttcgccttggcttcctggaccctc
caggcctgttccaacgctcttgcaggggaggtgtgggacatgaataataacatttaa
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