Clupea harengus (Atlantic herring): 105899301
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Entry
105899301 CDS
T09045
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein isoform X2
KO
K21878
Usher syndrome type-1G protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
105899301 (ush1ga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105899301 (ush1ga)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
USH complex and associated proteins
105899301 (ush1ga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_7
SR-25
Motif
Other DBs
NCBI-GeneID:
105899301
NCBI-ProteinID:
XP_012681919
Ensembl:
ENSCHAG00000027562
UniProt:
A0A6P8FSB0
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All DBs
Position
1:26025026..26036673
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AA seq
473 aa
AA seq
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MNDKYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLVVGRGGNPDK
CDIWGNTPLHLAAANGHQNCLSFLVSFGANIWCLDNDYHTPLDMAATKTHMDCVRYLDSI
AAKQSALNPKLVGKLKNRAFHDAERRIKDCVKMQRKHHRRMERKFQKEAPEASVSDAMSF
SSYTGSSASRVLFNTATISVPYSQATLHATTRGKTKIQKKLEKKKQGDGTFKIYEDGRKS
VRSLSGLQLGNDVMFLKQGTYVNPSNRSRRNIRHMFPSDNEDSISRAISEPDLHGPYVDH
SEVSTDSGHDSLFNRPGLGTMVFRRNYVSGGLFDIGVRDEGSLAGLEEATTKVRLRSRLQ
RSPSAGEDSIGSAHSLQQRNMEDLPWDEVELGLDDDDEQESNPLEVFLAAQHMNEFIPIL
RREKIDLEALLLCSDDDLKGIHIPLGPRKKMMDACKRRLETIEDPEAMEDTAL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaagtaccataaggcggctcgggatggctacctcgacctgcttaaagaggcc
acacggaaggacctcaacgcacctgatgaagatggaatgacaccgaccttatgggccgct
tatcacggcaatttggaagccctacgattagtcgttgggagaggagggaaccctgataag
tgtgacatatggggaaatacaccactccacctggccgctgccaatggccaccagaactgc
ctgtccttcttggtgtcgtttggtgccaacatttggtgcctggacaacgactaccacacg
cccctggacatggccgccaccaagacccacatggactgtgtgcgctacctggattccatc
gctgccaagcagtcggccctcaaccccaaactggtgggcaagctgaagaaccgggcgttc
cacgatgccgagcgacggatcaaggactgtgttaagatgcagaggaagcaccaccggcgc
atggagcggaagttccagaaggaggcgccggaggcctcggtgtcggacgccatgagcttc
tccagctacaccggcagcagcgccagccgggtactcttcaacactgccacaattagtgtg
ccatactcccaggctactcttcatgccacaacccggggtaaaaccaagatccagaagaag
cttgagaaaaagaagcagggcgatgggacttttaagatctacgaggacggccgcaagagc
gttcgctctctgtccggactccagctgggcaacgacgtcatgttcctgaagcagggcacg
tacgtgaaccccagtaaccgctctcgccgaaacattcgccacatgttcccctctgacaac
gaggactcaatctctcgtgccatcagcgagccggacctgcacgggccctacgtggaccac
tcggaggtgagcaccgactccggccacgactcgctcttcaaccggcccggcctgggcacc
atggtgttccgccgcaactacgtgagcgggggcctgtttgacatcggggtgcgcgacgag
ggcagcctggcgggcctggaggaggcgacaaccaaagtgcgcctgcgtagccggctgcag
cggtcgcccagcgcgggcgaggacagcatcggcagcgcccacagcctgcagcagcgcaac
atggaggatctgccctgggacgaggtggaactgggcctggacgacgacgacgagcaggag
agcaaccccttggaggtgttcctggctgcccagcacatgaacgagttcatccccatcctc
cgacgggagaagatcgacctggaggccctgctgctctgctccgatgacgacctgaagggc
atccacatacccctggggccccggaagaagatgatggacgcctgcaagagacgcttagag
accattgaggacccagaggccatggaggacacagcactgtga
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