Clupea harengus (Atlantic herring): 105899331
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Entry
105899331 CDS
T09045
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105899331 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105899331 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105899331 (taf2)
03036 Chromosome and associated proteins [BR:
char03036
]
105899331 (taf2)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M1
105899331 (taf2)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105899331 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
105899331 (taf2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105899331 (taf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
HEAT_2
Peptidase_M1
AP3D1
Peptidase_M1_N
HEAT_spiro
Motif
Other DBs
NCBI-GeneID:
105899331
NCBI-ProteinID:
XP_012681956
Ensembl:
ENSCHAG00000005735
UniProt:
A0A6P3VUX8
LinkDB
All DBs
Position
1
Genome browser
AA seq
1212 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGYVELTVFPTVVNLNRIKLNSKQCR
IYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVTAVDPDAGNGELCIKVP
SELWKQGDEMKVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDMLETVYTHDMRKKTFHYMLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQVSSYASMSIFSTNLLHSTMIIDQTPLTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEEMDRITDYELKMGGVLLHPTFGGGKEKDNPTPHL
HFSIKHPHTLSWEYYNMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLVSTSSFLKSISNVSGKDIGPLIKQWVEQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEESITALEK
FPTPASRLALTDILEQDQCFYKVRMLACFCLAQIANSMMSTWTGPPAMKSLFTRMFCCKS
CPNIVKTNNFLNFQTYFLQKTMPVAMALLRDVQNLCPKDVLNFILDLIKYNDNRKNKFSD
NYYRAELIDALCNSLTPAISISNEVRTVDNLNADVRLILEEITRFLNMEKLLPSYRNIIT
VSCLRAIRTLQKNGHIPSDPSLFKSYAEHGHFVDVRVAALEALVDYTRVDRSSEELQWLL
TMVQNDPIHYVRHRILSMLGNNPPFTKAAESQLCTEALVDQLWKLMNSGTSHDWRLRCDA
MNLYYTLFGLTRPSCLPLPELGLVLNLKEKKALLNPTIKPEQPVAAPELPAPMTFSVSIK
AEEEHLVTDTPPIPVPPPSQALKRKLDTPLGSPPEPGQVLQDEPSIKIPMKGRFPTQEEE
DIDMETVHDSQAFIYHHLNMLERPSTPGKEPPSVEQSLLSMPATPMPMPMPMPMPMPMPM
PMFGKESSSSSKHGEHHHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKERDAHAFSNSPA
SGRSMRSPSLSD
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaagaaagacaagggtttcgagagtcctcgaccgtacaaattaacccatcag
gtggtatgcataaacaacatcaatttccagaggaagtcagttattgggtatgtggagctg
actgtctttcccacggttgtgaatttaaaccgcattaaactcaacagcaagcaatgccgc
atatatagagtacgggtcaatgacttggaggctccgttcatttacaatgatcccacctta
gaggtctgccatcatgagtcaaagcagaggaacctgaactacttctccagtgcctacaca
gctgcagtaaccgctgtggacccagatgctggaaatggggagctttgcattaaggtccca
tctgagctctggaagcaaggagatgagatgaaggtgttgaaagtctacattgagttctcc
ctggaccagcccaagggaggcctgcacttcgttgtgcccgatgtagagggcagcatggca
gagaggggagcccacgtcttctcctttggctaccagaactccacacggttctggttcccg
tgtgtggactcttattcggagctgtgcacgtggaagctggagttcacagtggatgcctcc
atggtggccgtgtcctgtggggacatgctggagacagtctatacccatgacatgcgcaag
aagaccttccattacatgctgcccatccccactgcggctcccaacatctccctcgctgtg
ggaccgtttgaaatccttgtggatccctacatgcatgaggtgacccacttctgcctaccc
cagctgctgcccctgctcaagcacaccatgtcgtacctccacgagatctttgagttctac
gaggagatcctcacctgccgctacccctactcctgcttcaagactgtctttgtggacgag
gcctatgtgcaggtgtcctcgtatgcatccatgagcatcttcagcacgaacctgctgcac
agtaccatgattatagaccagacccccctgacgcgccgctgcttggctcaggctcttgcc
cagcagttctttggctgcttcatctcgcgcatgtcctgggctgatgaatgggttctgaag
gggatctctggctacatctatggactgtacctgaagaagacctttggcgtgaatgagtat
cgccactggattaaggaggagatggacaggattacggattatgagctgaagatgggagga
gttctgctgcaccccacttttggtggagggaaagaaaaggacaatccaaccccccacctg
cacttctccatcaaacacccccacacgctgtcatgggagtactacaatatgttccagtgc
aaagctcacctggtcatgcggctgatcgagaacaggatcagcatggagttcatgcttcag
gtcttcaacaaactgctgagcttggccagcactgcctcttcccagaagtaccagtctcac
atgtggagccagatgctggtgtcgacctccagtttcctcaagtccatctccaatgtgtct
ggcaaggacatcggtcccctcatcaagcaatgggtagaacagagtggagtggtgaagttc
tttggcagcttcgcctttaacaggaagaggaatgttctggagctggaaatccgccaggat
tacacctcgtccggcacacaaaaatatgtgggccccattaaagtgacggtacaggaactg
gatggctccttcaaccacaccctgcagattgaggagaacagcctgaagcatgatatacct
tgccactccaagagcagaaggaacaagaagaagaagattcctctgatgaatggagaggaa
gtggacatggacctgtcggccatggatgccgattccccgttgctgtggatacggattgac
ccggacatgtccatcttgcgcaaggtggagtttgagcaggccgacttcatgtggcagtac
cagctgcgctacgagcgggacgtggtggcgcaggaggaatccatcacggcgctggagaag
ttccccacgccagcctcgcgcctcgccctcaccgacatcctggagcaggatcagtgcttc
tacaaagtgcgcatgctggcctgcttctgccttgcccagattgccaactccatgatgagc
acatggaccggaccacctgccatgaaatcccttttcacccgcatgttctgctgcaagagc
tgcccaaacattgtcaagaccaacaacttcctcaacttccagacctactttctgcaaaag
actatgccggttgccatggctttgctgagagatgtacaaaatctatgtcctaaagacgtt
ctgaacttcattctggacctcatcaagtacaatgacaacaggaagaataagttctctgac
aattactacagggctgagttgattgatgccctctgcaactccctgacacctgctatcagc
attagcaacgaggtccgcaccgtggacaacctgaacgcagacgtgcgcctcatcctggag
gaaatcacccgcttcctcaacatggagaagctgctgcccagttacaggaacattatcact
gtcagctgcctgagagccatccgcacgcttcagaagaacggccacattcccagcgatccc
agcctcttcaagtcctatgcggagcacggccattttgtagatgtgcgcgttgctgccctg
gaagctcttgttgattacacacgagttgacaggagctcagaggaactgcagtggttgctt
accatggtccagaatgaccccatacattatgtcaggcatagaatcctaagcatgctcggg
aataacccaccctttaccaaagcagctgagtcccaactctgcaccgaagcgcttgtagac
caactgtggaagctcatgaactcaggcacctctcatgactggcgcctgcgctgcgatgcg
atgaacctgtactacaccctgtttggcctgacgcgaccctcctgcctgcctctgcctgag
ctgggcctggtgctcaacctgaaggagaagaaggccttgctgaaccccaccatcaaacca
gagcaaccggtggccgcaccagagctccccgcacccatgactttctcagtcagtataaag
gcggaggaggagcatttggtcacggatacaccaccaatcccagttcctccacctagccag
gcccttaagaggaagctcgacacgcccctgggctctcccccagagcctgggcaggtgctg
caggacgagccgagcattaaaatccccatgaaaggccgatttcccacccaagaagaggag
gatattgacatggagacagttcatgatagtcaggctttcatctatcatcatttgaacatg
ctggaaaggccatctacaccaggaaaagagcctccctccgtggagcagagcctgctctcc
atgcctgccacacccatgcctatgcctatgcccatgcccatgcctatgcctatgcctatg
cccatgttcggcaaggagagcagctcctcctccaagcacggcgagcaccaccaccaccac
caccatcaccacgagcacaagaagaagaagaagaagcacaagcacaaacacaagcacaag
cacaagcacgacagcaaggagaaggagcgcgacgcgcacgccttcagcaacagcccagcc
agcggacgctccatgcgctccccctccctctccgactga
DBGET
integrated database retrieval system
