Clupea harengus (Atlantic herring): 105899365
Help
Entry
105899365 CDS
T09045
Symbol
lcmt2
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105899365 (lcmt2)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
105899365 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
105899365 (lcmt2)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105899365 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_6
Kelch_5
Kelch_2
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
105899365
NCBI-ProteinID:
XP_042565283
Ensembl:
ENSCHAG00000020653
UniProt:
A0A8M1KS83
LinkDB
All DBs
Position
2:complement(18901515..18907111)
Genome browser
AA seq
513 aa
AA seq
DB search
MPACHKSRKSGKDTAVQGTNDSSVVSKVSASVYGYFRDDFQRRFVCKVSRRAPLINRGYY
VRWKVVDHCVKEFIQVTSSFNRRQGWEQCVCLDMNQFYLGLVPQPERQRVERLEPFDEFE
EWHQKCAHYFILTASKGSLTSQALLTHPTVSPIPPLKPQLEPEPLSVSVLSGDPCVEGLG
MASALLEPDVLMLTGGFGRSGRETAVRVLVRGQGGWSWASVETSADWGARLYHTMTAVSG
WGALVFGGRSSPLKPXSDVLKVTYDLRENTESTATSLSMTVSVKEMECSGCHPQPRWRHT
ATLLKHNGQTLLVVCGGRTEMEPVLGDVHFLDLETKHWTEISVEGVFPEARHSHSSCAYQ
EGVVIFGGLGGKGIPLGDTNLLKATSKGFCWETLQVQPPVLPRYSHSAHAIGEKLVVVGG
VWLQAESVPGVAVINLSTGASVEYDLDTSSIPWPLMLHSFCSELLDSERSKVTLIGGGGN
CFSFGTHLNLHPVTVDLSPALLELTTSLIAEPL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctgccacaaaagtcgaaaatcagggaaggataccgctgtgcagggaacaaat
gacagcagtgtggttagcaaggtgtcagcatcagtctatggttacttccgagatgacttc
cagagacggtttgtttgcaaggtgtctcgacgagcccctctcatcaacaggggttattac
gtgagatggaaggttgtggatcactgtgtcaaagagtttatccaggtgacatcaagcttt
aatagaagacagggctgggagcagtgtgtatgtttagacatgaaccagttctacctgggt
ctcgtccctcagccggagagacagagagtggaaagattggagccatttgatgagtttgag
gaatggcaccagaagtgtgctcactatttcatcctcactgcctccaaaggctctcttacc
agccaggctctcctcactcatcccacagtgtcccctattcctcctctgaagccccagctt
gagcctgagcctctgagtgttagtgtcctttcgggtgacccttgtgtggagggcctgggg
atggcctcggccctgctggagcctgacgtcctcatgctcaccggaggattcgggaggagt
ggcagagagaccgctgtcagggtccttgtcagaggccagggtggctggagctgggccagt
gtggagacctctgcagactggggggctcgactgtaccacacaatgacagcagtctctgga
tggggtgcactggtatttggtggcagatcatccccattgaagccttgaagtgatgttctc
aaagtgacctatgacctcagggagaacacagaatccactgcaacatctttgtcaatgact
gtgtcagtgaaggaaatggaatgcagtggctgtcatccacaaccaagatggcggcatact
gctactttgctgaaacataatggccaaactttattagttgtatgtggaggacgtacagag
atggagccagtcttaggtgatgtccacttcctggatttggagaccaaacactggacagag
atttcagtggagggtgtcttccctgaggctcggcattcgcactcctcttgtgcctatcag
gaaggtgtggtcatattcggtggtctaggaggaaaaggaattcctttaggagataccaat
ttactaaaagccacatctaaaggtttctgctgggagacattacaggtgcaacctcctgta
ctacccaggtattcccattctgcccatgcgattggtgagaagcttgttgtggttggcgga
gtttggctccaggcggagagtgtgccaggagtggcagtaatcaacctgagcacaggtgcc
agtgtggagtacgacctggacacatcttctattccttggcccctcatgctgcattccttc
tgctctgagctccttgactcggagaggtcaaaggtcactttaattggtggaggagggaac
tgcttttcatttggcacccacttaaatctccatcctgtgactgtggacctgagtccggca
ctcctagaacttaccacttcactcatcgcagaaccactatag
DBGET
integrated database retrieval system
