Clupea harengus (Atlantic herring): 105899431
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Entry
105899431 CDS
T09045
Symbol
lrfn2b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105899431 (lrfn2b)
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105899431 (lrfn2b)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
SALM family
105899431 (lrfn2b)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
105899431 (lrfn2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
ig
fn3
Ig_2
LRR_5
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
105899431
NCBI-ProteinID:
XP_012682070
Ensembl:
ENSCHAG00000009438
UniProt:
A0A6P3VVG4
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Position
15:5868580..5968647
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AA seq
812 aa
AA seq
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MDHVLWGLLVLGVVVTTAQACPKYCVCQNLSESLGTLCPAKGLLFVPADIDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTIGYIQPFSFGDLETLRSLHMDNNRLTELGPDDL
RGLVNLQHLILNNNQLGRISEKTFEDLAPSLEDLDLSYNNLKGLPWDNVRQMVNLHQLSL
DHNLLDFIPEGTFVDLERLARLDLTSNRLQKLPPDPIFARAQDLALSTTPFAPQLSLSIG
GNPLHCNCELLWFRRLERDDDLETCASPPGLKGRYFWNVREEEFQCEQPLITQHTHRMLV
LEGQTASLRCEAVGDPTPTIHWIAPDERLLGNSSRTVVYGNGTLDIMITTSKDYGTFTCI
AANVAGESTATVELSIIQLPHISNGTGPAVQPKSRLSDITGTTRTSKGVPKPQPERAVSA
SDVTSTSALVRWSVSKATPKVKMYQLQYNCSDDEVLIYRMIPASSKAFHVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCVQFFTRDDYPQCQSLHSQLLGGTMILVVGGVIVATLLV
FIVILMVRYKVGDADPPSSKLTNVSDTYSQTNGGRLGQNGMPMPPLRPTSSGAEAGVSMA
SGKPKPKVMMHNEVVEFKCGSLQSSLSSSSSSSSSGSLAGAGGGGAGGSYSPNTTLANIW
RSANPKPRANLDQLLGAFNSLDLRSQAGASGASGSRLGRGEGLSTPSSSAAAAAPPTDKE
PLLGRTLDSRLSRLLMLPLDSRPKRSQSFDMGDFASATGQQLCSYPRRISNIWTKRSLSI
NGMLLQCDEEQDTGGSKGTIDGTSEWVMESTV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgtgctctgggggctgctggtcctgggtgtggtggtgacgacggcccaagcc
tgccccaagtactgcgtgtgccagaacctctccgagtccctcggcactctgtgccccgcc
aaaggccttttgttcgtgcccgccgacatcgacagacgcaccgtggaattgcgtctgggc
ggcaactacatcttgcgcatcacccagcaggactttgccaacatgacggacctggtggat
ctgacgctctcccggaacaccatcggctacatccagcccttctccttcggcgacctggag
acactgcgctccctgcacatggacaacaatcgactgacggagctgggcccggacgacctg
agagggctggtcaacctccagcacctcatcctcaacaacaaccagctggggcgaatatcc
gagaagaccttcgaagacctcgctccttctctggaggatctggacctgtcctacaacaac
ctgaaagggctaccttgggacaacgtccgacaaatggtcaacctgcaccagctgagtttg
gatcacaacctgctcgacttcatcccggaggggacgttcgtggacctggagcgcctggcc
cgtctggacctgacctccaaccggctccagaagcttccgccggacccgatcttcgcccgg
gcccaggacctggcgctgtccaccacgcccttcgccccccagctctcgctgagcatcggg
ggcaacccgctccactgcaactgcgagctgctctggttccggcgtctggagcgcgacgac
gacctggagacctgcgcctcccctcccggcctcaaggggcgctatttctggaacgtgcgt
gaggaggagttccagtgtgagcagccgctcatcacgcagcacacccaccggatgctggtg
ctggagggccagacggccagcctgcgctgcgaggccgtcggagacccaacgcccaccatc
cactggatcgcgccggacgagcgcctgctgggcaactcgtcccgcacagtcgtctacggc
aacggcaccctggacatcatgatcacaacctccaaagactacggcacgttcacctgcatc
gccgccaacgtcgccggcgagtccaccgccactgtggagctgtcaatcatccagctgccc
cacatcagtaacggaacagggccggcagtgcagcccaagtcgaggctctccgatatcacc
gggacaaccaggaccagtaagggcgtgcccaagccccagcccgagcgagcggtgtctgcc
tcagacgtgacctccacgtccgccctggtccgatggtctgtgagcaaagcgactcctaag
gtgaagatgtaccagctccagtacaactgctccgacgatgaagtcctcatctacagaatg
atacccgcctccagcaaggccttccacgtgaccaacctggtgtcgggcaccaagtacgac
ctgtgcgtgctggcggcgtgggacgacaccgccaccaccctgacggccaccaacgtggtg
ggctgcgtgcagttcttcacacgcgacgactacccacagtgccagtcgctgcacagccag
ctgctgggtggcaccatgatcctggtggtgggcggcgtgatcgtggccacgctcctcgtc
ttcatcgtcatcctcatggtgcgctacaaggtgggcgacgctgatcctccgtccagcaag
ctgaccaacgtgagcgacacctactcgcagaccaacggcggccggctgggccagaatggc
atgcccatgccgccgctgcggcccacgtcgtccggggcggaagccggcgtgtccatggcg
tccggcaagcccaagccaaaggtgatgatgcacaacgaggtggtggagttcaagtgcggc
tcgctccagagcagcctctcctcctcgtcctcgtcctcctcttcgggctcgctggcagga
gcgggcggagggggggcaggaggctcctacagccccaacaccacgctggccaacatctgg
aggtcggccaaccccaagccccgcgccaacctggaccagctcctgggcgccttcaactcc
ctggacctgcggagccaggctggggcctcgggcgcctccgggagccggctgggacgaggc
gaagggctgtcgacgccctcgtcgtccgcggcggcggcggctccccccaccgacaaggag
cctctgctggggaggactctggactcgcggctgagccggctgctcatgctgccgctggac
tcgcggcccaagcggagccagtccttcgacatgggcgactttgcgtcggctaccggccag
cagctgtgcagctacccgcgccgcatcagcaacatctggactaagcggagcctctccatc
aacggcatgctgctgcagtgcgacgaggagcaggacacgggaggcagcaagggcaccata
gatggcacctccgaatgggtcatggagagtactgtgtag
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