Clupea harengus (Atlantic herring): 105899442
Help
Entry
105899442 CDS
T09045
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105899442 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105899442 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105899442 (srsf5b)
Spliceosome [BR:
char03041
]
Common components
Common spliceosomal components
SR proteins
105899442 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
105899442
NCBI-ProteinID:
XP_012682088
Ensembl:
ENSCHAG00000007427
UniProt:
A0A6P3VVH1
LinkDB
All DBs
Position
15:6862711..6868110
Genome browser
AA seq
296 aa
AA seq
DB search
MNGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGGGGGGGGGAGRFPARYGRGSTDSRSRNPPPMRTE
NRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASSSDLKNALDKLSGK
EINGRKIRLIEANKKRSRSRSRSESSSRSRSRGRSPSRSRSRSRKSYRSRSRSRSRSPSH
SPARPKSESKRPLRAESGSPTSPPVQRAPPSPVRSPSRSRSRSRSRSLSPSSDSRH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggtgtcgtatcttcattggtcggctgaatccctctgcaagagagaaagatgtc
gagcgtttcttcaaaggatatggcagaatccgcgacatcgatctaaaacgcggattcggt
tttgtggagtttgatgatccacgagatgcagaagatgctgtttacgaacttgatggcaaa
gaactctgtaatgaaagggtgaccattgagcatgctcgtgtgcgcctgcgaggggggcgg
gggagaggcggtggtggtggtggcggcggtggtggtggcggcgccggccgcttcccagcc
cgctacggcagaggctccacggacagtcgtagtcggaacccccctcctatgcgcaccgag
aaccggctcattgtggagaacctgtcctcgagagtcagttggcaggacctgaaagacttc
atgaggcaagctggggaagtgacttttgcggatgcccaccgcccaaagctcaacgagggc
gttgttgagtttgcgtcttccagtgatctgaagaatgccctggacaaactgtctgggaag
gagatcaatgggaggaaaatccgactcattgaggccaacaaaaagaggtccaggtctcgt
tctcgttccgagagctcgtcgcgatctcgttcccgtggtcgctccccgtcccgctcccgc
tcccggagcaggaagtcgtaccgctcccgctctcgcagccgttcccgctcgcccagccac
tccccagcccggcccaagtccgaatccaagcgcccgctgcgggctgagtccggctccccc
acaagcccccccgtgcagcgtgcaccgccttccccggtccgctccccatctcgctctcgt
tcccgctctcgctcccgttccctttccccatcctccgacagccggcactga
DBGET
integrated database retrieval system
