Clupea harengus (Atlantic herring): 105899545
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Entry
105899545 CDS
T09045
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
105899545 (gpcpd1)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
105899545 (gpcpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TILa
SpoU_methylas_C
VWC
TreTu_C
Motif
Other DBs
NCBI-GeneID:
105899545
NCBI-ProteinID:
XP_012682198
Ensembl:
ENSCHAG00000005111
UniProt:
A0A6P3VVA0
LinkDB
All DBs
Position
15
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AA seq
690 aa
AA seq
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MEINCEGDATNLSLEEPAMESTYVTLTVRGTTSPGEVIAVVGSCESLGNWCYQRAVTLQP
TEADGTLWKKTITVPRGAVTRYRYFKGSFLENKSAGGPCQVIVTRWETHLHPRALNPSAV
NLEFDDGQFGFHNGAENVDSGWLTCQTEIRLRLHYSIKPPVSFTKKKFKKSRFRFKLTIE
GVEEEDDDEEELPIPSPSPWKNMTPTLEISMITAGGYKSRHSQPEDGYALEPMQWTEYSI
QTMDPDNLELTFQFFEEDLSVKVVQGDIHPGHVGTACLLSSSFVESGKDAGMATLPIMSR
SAGQTMGKVRVDYLVIRPIQDLQCDMQASFTRYWKKRSTLDVGHRGAGSSHAAKHHKVRE
NTIASFLSAANHGAAYVEFDVHLSKDFVPIVYHDLTCCISTKKKNDKNNLMLFEVPVKDL
TYDQLQLLKLAHSTAMSVHDNKDMDEEEDIDDHQPFPSLLQIFQAVPEHVSFNIELKWIC
HMKDGTWEGNLSSYFDMNIFLDIILTCVFKNAGKRRILFSSFHPDICSMVRQKQNKYPIL
FLTQGVSDVYPELMDIRCQTTQIAMSFAQSENLLGISAHSEEMLKNMEFISQAQSKGLVM
FCWGDDNNNHNNRNTLREQGIDGLIYDRICEEQMEQPNIFQVEEQVSLQEVISKETMQNC
ACSTYSLACDTVTCPARTVSGESDSGISSS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaattgtgaaggtgacgccaccaacttgtcgcttgaagagccagccatggag
tcaacatacgtgactttgactgtaagaggaaccacatctcccggcgaagttatagcagtt
gtgggcagctgcgagtctttgggaaactggtgttaccagagagctgtgactttacagcct
acggaggcggatggcacgctctggaaaaagaccatcactgtcccacgaggagctgtaacc
agataccgctactttaaaggatcctttctcgaaaataagagtgcaggtggcccatgtcaa
gtcatagtcactaggtgggagacccatctgcatcctcgagcattgaacccctcagctgtc
aaccttgagttcgacgatggacagtttggattccataacggcgctgagaatgttgactcc
ggctggctcacctgccagactgaaattcgtctccgattgcactactccatcaaaccaccg
gtgtcctttaccaagaagaagttcaagaagtcacgcttcagattcaaactgacaatagag
ggtgtggaggaagaggatgatgacgaggaagagctgccgattccgtcgccgagcccttgg
aaaaatatgactccgactctggagataagcatgatcacggcaggcgggtacaagtcccgc
cactcccagcccgaggacggctacgccctagagcccatgcagtggaccgagtacagcatc
cagaccatggaccccgacaacctggagctcaccttccagttcttcgaggaggacctgagt
gtgaaggtggtgcagggggacatccacccgggccacgtgggcacggcctgcctcctctcc
tcctccttcgtggagagcggcaaagacgcgggcatggccaccctgcccatcatgagccga
agcgccggccagacaatgggcaaggtccgagtggactacctggtgatccggcccatccag
gatctgcagtgtgacatgcaggcgtccttcaccaggtactggaagaagaggagcaccctg
gatgttggccacagaggagctggcagctcgcacgctgccaaacaccacaaagttagggag
aacaccatcgcctcattcctgagtgctgccaatcacggggctgcctacgtggagtttgac
gtccacctgtcgaaggatttcgtccccatcgtttaccatgacctgacttgctgcatctcc
accaaaaagaaaaatgacaagaacaatttgatgctgtttgaggtgcctgtgaaagaccta
acatatgaccagctgcagctcctaaagctggcccattcaactgccatgagtgtccatgac
aacaaagatatggatgaagaggaggacatcgatgaccatcagccgttcccttcactctta
cagatcttccaagccgttccggaacacgtgagcttcaacattgagctgaagtggatctgc
catatgaaggatgggacgtgggaggggaacctgtcatcttacttcgacatgaacatcttc
ctggacatcatcctcacctgtgtgttcaagaatgccggcaagagaaggatccttttctcc
tccttccaccctgacatatgcagcatggtgcgtcaaaagcagaacaagtacccaatcctg
ttcctgactcagggggtgtcggacgtgtaccccgaactcatggacatccgctgccaaacc
actcagatcgcgatgagctttgcacagagtgagaatttactgggtatcagtgcccactca
gaggagatgttgaagaatatggagtttatatctcaggctcagtctaaggggctggtgatg
ttctgctggggtgatgacaacaacaaccacaataaccgaaacacgctgagagagcaaggc
attgacggactcatctatgaccgaatctgcgaggagcagatggagcagcccaatatcttc
caggtagaggagcaggtgtccctgcaggaggtcatctccaaggagacgatgcagaactgc
gcctgttccacctacagcctggcgtgtgacaccgtgacctgcccggcccgcaccgtcagt
ggagagtccgactccggaatcagctcctcctga
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