Clupea harengus (Atlantic herring): 105899567
Help
Entry
105899567 CDS
T09045
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105899567 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
105899567 (lrfn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
V-set
Sp38
Motif
Other DBs
NCBI-GeneID:
105899567
NCBI-ProteinID:
XP_031436233
Ensembl:
ENSCHAG00000005852
UniProt:
A0A6P8GA64
LinkDB
All DBs
Position
14:12033072..12074766
Genome browser
AA seq
823 aa
AA seq
DB search
MEKLLVLSFVIGMAVKAQTCPKRCSCQVLSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLVDLTLSRNTISYITPHAFADLENLRALHLNSNRLTRIANDTFS
GMSKLHHLILNNNQLMLISLGAFNDLLALEELDLSYNNLESIPWEAIQRMISLHTLSLDH
NMIEYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGMSSPTMFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPTHLSGRYFWSIPEEEFLCEPPLIISHSPEMRVLE
GQQVALRCKARGDPVPAIHWISPEGKLVSNTSRTVVYANGTLHITITTVKDTGSFTCISS
NPAGEAHQTVELMIIKLPHITNSTNNIQESDPGSSDISTSTRAGANGSNQTADVKTSPDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLVNNLAAG
TQYDLCVLAIYDDGMTSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNSSDSAKGRMVTTNVHSQTNGAQSQGCTVTPSVSKQAMGGKDGG
GSDGGGGGGAGGSQKGPPPDTLTHSSETTSLAECSTATSQFSQGWTTAGSSGTLKSKRKG
AAPKPAGTPGQASSGAAKSPEPQIEVLLNAETQNTNRNNSTALQQPPMVHFVAAPAPGPS
HPPPQLPPARFKDTPILRRVHQRPSGSKYLTLPVEGTRAKRRYSLNEDLSKHHCYIGSTK
FSSVWSAKRSLSMNGMLLQLENPDLEGGKATHSSAEWILESTV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtcctctcgttcgtcattggaatggcagtgaaggcccaaacttgt
ccaaagcgctgttcgtgtcaagtgttatcgcccaaccttgccaccctctgtgccaaaaaa
gggctcctcttcgtcccgccgaacatcgaccgccacaccgtggaactccgcctggccgac
aactttgtcaccagcatcaagcggaaagactttgccaacatgacccggctggtggacctg
acactgtcgcggaacaccatcagctacattacgccgcacgcgttcgccgacctggaaaac
ctgcgcgccctgcacctgaacagcaaccggctgacgcgcatcgccaacgacaccttcagc
ggcatgtccaagctgcaccacctcatcctcaacaacaaccagctcatgctcatcagtctg
ggggcgttcaacgacctcctggcgctggaggagctggatctctcctacaacaacctggag
agcatcccctgggaggccatccagaggatgatcagcctccacacgctcagtctagaccac
aacatgatcgaatacattcccgagggcaccttctcgctgctgcagaagctcaaccggctg
gacgtcacgtccaacaagctccagaagctgccgccggacccactctttcagcgagcgcag
gtgctggccacgtcgggcatgagcagcccgacgatgttcgcgctcagcttcggcggcaac
ccgctgcactgcaactgcgagctgctgtggctgcggcggctgagccgcgaggacgaccta
gagacgtgcgcgtcgcccacccacctctccgggcggtacttctggtccatccccgaggag
gagttcctgtgcgagccaccgctcattattagccactcgcccgagatgcgcgtgttggag
ggccagcaggtggcgctgaggtgcaaggcccgcggcgaccccgtgcccgccatccactgg
atctccccggaggggaagctggtgtccaacacctcgcgcaccgtggtctacgccaacggc
acgctgcacatcaccatcaccaccgtcaaggacacgggctcgttcacctgcatctcgtcc
aacccggccggcgaggcgcatcagaccgtggagctgatgatcatcaagctgccgcacatc
accaacagcaccaacaacatccaggagtccgaccccggctcctcggacatctccacctcc
accagggctggggccaacggcagcaaccagacggccgacgtcaagaccagcccggacaag
agggtggtcatagcggaggccacgtcctccactgccctgatcaagttcaatttccagagg
aatatccctggcatccgcatgtttcagatccagtacaatggcacatacgacgactctctg
gtttacaggatgatccctcccacgagcaaaaacttcctggtgaacaacctggcagcaggg
acccagtacgacctgtgcgtgttggcgatctacgacgacggcatgacctcgctgacggcc
acgcgcgtggtgggctgcgtccagttcaccaccgagtccgagtacctgcgctgccacttc
atgcagtcgcagttcctgggcggcaccatgatcatcatcatcggcggcatcatcgtggcg
tccgtgctcgtcttcatcatcatcctcatgatccgctacaaggtgtgcaacagcagcgac
tcggccaagggccgcatggtcaccaccaacgtgcactcgcagaccaacggcgcgcagtcg
cagggctgcaccgtcacgccgtccgtctccaagcaggccatgggggggaaagacggcggg
gggagtgacggaggaggaggaggaggagcagggggcagccagaagggcccaccgccggat
accctgacccactcatcggagaccacgtctctagccgagtgctccaccgctacctcccag
ttcagccagggctggaccaccgcgggctcctcgggcacactcaagagcaagcgcaagggt
gccgcgccaaagcccgccggcactcccggccaggcctcctccggcgctgccaagagcccg
gagccccagatcgaggtgctgctcaacgcggagacgcagaacaccaaccgcaacaactcc
actgccctgcagcagcccccgatggtccacttcgtggccgcccccgcgcccggcccctca
cacccacctcctcagctgcccccggcgcgcttcaaggacacgcccatcctccgcagggtc
catcagaggccctccggctccaaatacctgacacttccggtggagggcacgagagccaag
cgcagatactctctcaacgaggacctgtccaaacaccactgctacatcggctcgaccaag
ttcagcagcgtgtggtcggccaagcggagcctatccatgaacgggatgctgctgcagctg
gaaaacccggatttggaaggcgggaaggccactcactccagcgcagagtggattcttgaa
agcactgtgtga
DBGET
integrated database retrieval system
