Clupea harengus (Atlantic herring): 105899572
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Entry
105899572 CDS
T09045
Symbol
ralgapa1
Name
(RefSeq) ral GTPase-activating protein subunit alpha-1 isoform X3
KO
K25768
Ral GTPase-activating protein subunit alpha
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105899572 (ralgapa1)
Membrane trafficking [BR:
char04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
105899572 (ralgapa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rap_GAP
RALGAPB_N
DHR-2_Lobe_C
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
105899572
NCBI-ProteinID:
XP_031436600
Ensembl:
ENSCHAG00000002656
UniProt:
A0A6P8GP47
LinkDB
All DBs
Position
14:11615437..11689977
Genome browser
AA seq
2192 aa
AA seq
DB search
MFSKKPHGDVKKSTQKVLDPKKDVLTRLKHLRIVIENADSGDLKHFFDQNYSHIYYVFFE
NFVTIEVNLKQKGHKSQREELDSILFIFEKILQLLPERIHQRWQFHSIGLILKKLLHTGN
SLKIRREGVRLFLLWMQALQTNALREQLWIFACLIPGFPSPQSEHGPRTLDNLISPPLCL
QETQVGPEEITPLVPPQSGDKAQEDLTGYFLEALLKYMVNQAKSLEWRYKENHEKGFAFL
FANFKKYYLPHIFPNFSKETSLYNPILEVPPIRPKPYYAVVKRDPDTNEALYCTKESFLN
ARVIFIRWLVSFWLEPRANTGTHIPGVEGENVPKNIQRAAAGLAARMEDSGGSRGPDSLD
GSGGGGLGGGAEPEQSHSNTSTLTEREPSSSSLCSVDEEHLTDIEVVRRVLCSSRTNVNF
ITEIFRQAFLLPMCEAAAMRKVVRVYQEWIALEDKPVFMKEQEDEHRPLMNSASDDKDEE
ERGVKGSGHSRTSSWCRSSQGRGGNSCEGEGLEVSVQAGVQATLQVFITNSSNVFLLEPA
NELKMLLEEHVDMCKRVLNIYRSLVMHETMDQKTWEQILLVLLRVTECVMKRSPSVTASS
RRSPTLSGRLAGAIFQTLIVAWIKGNLNVYISRELWDDLLAVLSSLTCWEELVTEWSLTM
ETLTKVLARHLYSLDLNELPLDKLSEQKQKKHKGKGGVNEGHKMVVDRSFSKGWSRDLPG
QAAMRQRSATTAGSPGIEKARSIVRQKTVDMEEPPLAPRGPRLRHSSQSEEAAPASLCSE
VFGAPGEADLTPPGSGALPPLPRSSSASDVMEPFIAERAKVNKEDLPPKMRPVSSDAGNS
NPNFSDLMDEFIQERLRAPRGNSVSPPEQGITRRGSSPGSLEIPKDLPELLTRQSATRPA
DDPGVPSEWTSPASASGSDLISSDSQSDSFNAFQYDGKFDNFSFAPDGAGSSLDRDSLGG
GPQTGEEQEQELSSLTTLHIDSDTSSQQGVSADTVTITGSESASPMHSLGGSRSQTPSPA
TLRADHTEHKDLQLDEKLHHSVLQTPDDLETSEFPNEDCSVMAGGSLTGWHADVATVMWR
RMLGILGDVNTIKDPEIHAQVFDYLCELWQNLAKIRDNLGISLDNQSSPPPPDLIPPLRI
LTPWLFKATMLTERYKQGKLHAYKLICKIMKRRQDVSPNSDFLTHFYNIMHCGLLHVDQD
IVNTIIKHCSPRFFSIGLPGATMLTLDFIVAASRVTSCSSLNAPRVEAQILLGSLVCFPN
LYEELPALHPTTADMVMTKFRDVKEHIIKHILNSAKDEPSAPARCVALCSLGIWLCEELV
NGTRHPQIKEALNVICVTLKFPNKSVALVASDILHLLINYVEHLQKFPPDTPKKIVEILI
ATITYLLPTTESSPHELDKRLVVSLLLCLLDWVMALPPKTLLQPIQTLSPDKDRGEKSVL
SCIYKVLHGCVYGAQSFSNPRYFPINLSDLSSPDYDPFLLLESLKEPEPLHSPDSERSSK
MQPVAEVRSRIQQGLISVAARTVISHLVNHLGHYPMSGGPATLTSHVCENHDNPYSESPD
LSPELFDAPNLQFFALNSSTLLSCMQIRAEDGLPGGGMSAGLTTTSACVRVIVRDIAGKH
SWDSAVLYGPPHCCSAAGQQPVPPPASSVSKATQGEGHRERRGGGGEEEERDERRLQEEE
EEDEEDVEDDVDEALVADDAEVEDAPRLAESTGERPDDNTSSGETEEEEERKKRQEEHNN
NNNNNEEEEDDDEDDEGHLGLTGPRAKRRCREVFPQWDGLCEGEDALDEMLQYLGVSSPE
CLQRAGAPLNIPAPQPACVSEKQETDVINAILKQCADERDFATHRGNGLNMRASRQGQPG
AQRPQSAFYYCRMLLNILGMNSWEKRSSFHLLKKNEKLLRELKNLDSRQCRETHKIAVFY
VAEGQEDKHSILSNTSGSQAYEDFVSGLGWEVNLTSHCGFMGGLQRNRSTGQTMPYFATS
TVEVMFHVSTRMPPDSDDSLTKKLRHLGNDEVHIVWSEHSRDYRRGIIPTEFGDVLIIIY
PMKNHMYSIQIIKKPEVPFFGPLFDGAIVDSKILPAIVRATAINASRALKSLIPLYQNFY
EERARYLETIVQHHLEPTTFEDYAARVFCPAPYHHLPSEAGSCHETQSAESPAAMAAVAG
DGSDSASPMSPRASKSRMSMKLRRSSGSANKT
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaaaaaagcctcatggggatgtcaaaaaatcgacacagaaagtattggatcca
aaaaaggatgtcctgacacgtttaaaacacctgcgaatcgtaatagagaatgcagactca
ggggacctgaagcacttctttgaccagaactactcccatatctactatgtattttttgag
aacttcgtcaccattgaggtcaacctgaaacagaaaggtcacaaatcgcaaagggaagag
ctggactccattctattcatattcgagaaaatcctgcaactgctgccggagcgtatccac
caacgatggcagtttcacagcattggtcttattctcaagaagctgttgcacacgggaaat
tctttaaagatccgtcgggagggcgtgcgtctcttcctgctgtggatgcaggcgctgcag
accaacgccctgagggagcagctgtggatcttcgcctgcctcatccccggcttcccctcg
ccgcagtccgaacatgggccccgcacgctcgacaacctcatcagcccaccgctatgcctg
caggagactcaagtgggtccggaggagatcaccccgctggtgccgccacagtcgggggat
aaggcccaggaggacctgaccggctactttctggaggccctgctgaaatacatggtaaac
caggctaagagcctcgagtggcggtacaaggagaaccatgagaagggctttgctttcctc
ttcgccaacttcaagaagtactacctgccccacatcttccccaacttctccaaggagacc
agcctgtacaaccccatcttggaggtaccccccatcagaccaaagccttactatgcagtg
gtgaagcgagaccccgacaccaacgaggcgctgtactgcaccaaggagagcttcctgaac
gcccgcgtcatcttcatccgttggctggtgtccttctggctggagccgcgcgccaacacc
ggcacacacatccccggcgtggagggagagaacgtgccaaagaacattcagagagcagca
gcaggtctggctgcacggatggaggacagcgggggctcccgggggcccgactccctggac
ggcagcggcggcggagggctgggcggcggggcggagcccgagcagtcgcactccaacacg
agcacgctgacggagcgcgagcccagctcgtccagcctgtgcagcgtggacgaggagcac
ctcaccgacatcgaggtggtgcgccgcgtcctctgctcctcgcgcaccaacgtcaacttc
atcaccgagatcttccgacaggccttcctgttgcccatgtgcgaggctgcagccatgcgc
aaggtggtgcgcgtctaccaggagtggatcgccctggaggacaagcccgtgttcatgaag
gagcaggaggacgaacaccggccactcatgaactccgccagcgacgacaaggacgaggag
gagaggggggtgaaggggtctggtcacagtaggacttcgagttggtgcaggagctcccag
ggcagaggaggtaacagctgtgagggcgaagggctggaggtcagcgtccaagctggtgtg
caggccacactgcaggtgttcatcaccaactcctccaacgtgttcctgctggagccagcg
aacgagctgaagatgctgctggaggaacatgttgacatgtgcaagcgcgtgctcaacatc
taccgcagcctggtcatgcacgagaccatggaccagaaaacctgggagcagatcttattg
gtgttgctacgggtaacggagtgtgtgatgaagagatccccctcggtcacagcctccagc
aggaggagccccaccctctctggccggctagcgggggccatcttccagactctgattgtg
gcgtggatcaaaggaaacctgaacgtgtacatctcgcgggagctgtgggacgacctgctg
gccgtgctctcctcgctcacctgctgggaggagctggtcaccgagtggtccctcaccatg
gagacgctcaccaaggtgctggcgcgccacctgtacagcctggacctcaacgagctgccc
ctggacaagctcagcgagcagaagcagaagaagcacaagggcaaaggtggcgtcaacgag
ggccacaagatggttgtagatcgctccttctctaagggctggagtcgcgacctgccgggc
caggcagccatgcgccagcgcagtgccaccacggctgggtcgcctggtatcgagaaagcc
cgcagcatcgtgcgccagaagaccgtggatatggaggagcctccgttggccccacgcggg
cctcgtctgcgccacagctcccagagtgaggaggcagccccggcgtccctctgctctgag
gtgttcggtgcgcccggcgaggccgacctgacccctcccggcagcggtgccctcccaccc
ctcccccgcagctccagtgcctcagacgtcatggagcccttcatcgcagagcgcgccaaa
gtcaacaaggaggatctgcctccgaagatgcgtccggtgtcgagtgacgcgggcaacagc
aaccccaacttcagcgacctgatggatgagttcatccaggagcgcctgcgagcgccacgg
ggcaactctgtgagtccgcctgagcagggcattactcggcgtggcagtagccctggcagc
ctggagattcccaaagacctgccagagctgctgacgcggcagagcgccacgcggcccgcc
gacgaccccggcgtgccctctgagtggacctcgcctgccagtgccagcgggagtgacctc
atcagctcggacagccaatcagactccttcaatgcctttcagtatgacggcaagtttgac
aatttcagctttgctccggacggcgcgggcagctccctggacagggacagtctgggcggc
ggccctcagacaggcgaggagcaggagcaggagctgtccagcctcaccaccctgcacata
gactccgacaccagcagccagcagggcgtctccgccgacacggtcaccatcacaggctca
gagagcgcctctcccatgcactctctggggggctcccgctcccagaccccctccccagcc
acactcagggcggaccataccgaacacaaggacctgcagctggacgagaaactccaccac
tccgtgctgcagactcccgatgacctcgagacgagtgagttccctaatgaggactgcagc
gtgatggccggcggctctctaaccggctggcacgctgacgtcgccacggtgatgtggagg
cggatgctgggcatcctgggcgacgtgaacaccatcaaagaccccgagatccacgcccag
gtgttcgactacctgtgcgagctctggcagaacctggccaagataagagacaacctgggc
atctccctcgacaaccagtcatctcctcctccgccagacctgatcccgccactccgcatc
ctgacgccgtggcttttcaaggcaactatgctcactgagcgctacaagcagggcaagctg
cacgcctacaagctcatctgcaagattatgaagaggaggcaggacgtgtcgcccaactcc
gacttcctcacacacttctacaacatcatgcactgcggcctgctgcatgtcgaccaggac
atagtgaacactatcataaagcactgctcaccacgcttcttctccatcggcctccccggg
gccaccatgctcacactggacttcatcgtggccgccagcagagtcacttcctgctcctca
ctcaatgctcctcgtgtggaggctcagatcctgctgggctctctggtgtgtttccctaac
ctgtacgaggagctgcccgccctgcaccccaccaccgccgacatggtcatgaccaagttc
agggacgtcaaggagcacatcattaaacacattctaaactctgccaaagatgaaccctca
gcccctgccaggtgtgtggcgctctgcagcctgggcatctggctgtgtgaggagttggtc
aacggcacgcggcacccgcagatcaaagaggccctcaacgtcatctgtgtcactctcaag
ttcccaaataaaagcgtggccctggttgcttcagatattctgcacctgctcatcaactat
gtggagcacctgcagaaattcccccccgacaccccaaagaaaatagtggagatcctcata
gccaccatcacctacctgctccctaccacagagtcctcaccccacgagctggacaagagg
ctggtggtgtccctgctgctgtgcctgctagactgggtgatggcgctgccccccaagacc
ctcctgcagcccatccagaccctctcaccggacaaggaccgtggagaaaagtccgtcctc
agctgcatctacaaggttctgcacgggtgtgtgtacggggcgcagagcttcagtaaccct
cgctatttccccatcaacctgtctgacctcagtagccctgactacgaccccttcctgctg
ctggagagcctgaaggagcccgagcccctgcactcgcctgactccgagcgctcgtccaag
atgcagcccgtcgccgaggtgcgtagccgtatccagcagggcctgatctccgtggcggcc
cgcaccgtcatctcgcacctggtcaatcacctgggccactaccccatgagcggcggcccg
gccacgctgaccagccacgtgtgcgagaaccacgacaacccgtacagcgagagccccgac
ctgtcgccggagctcttcgacgcgcccaacctccagttcttcgccctcaacagctccacg
ctgctctcctgcatgcagatccgtgccgaggacggcctgcccggcggcggcatgtcggcc
ggcttgaccaccaccagcgcctgcgtgcgggtcatcgtccgcgacatcgccggcaagcac
tcctgggactcggccgtgctgtacgggccgccccactgctgctcggcggcggggcaacaa
ccggtgccgccaccggcgtcgagtgtctccaaggcaacgcagggagaaggacacagggaa
aggcggggaggaggaggggaggaggaagagagggatgagagaaggctacaggaagaggaa
gaggaggatgaggaggatgtggaggacgatgtcgacgaggcgctggtggctgatgacgca
gaggtggaggacgcgccccgattggctgagagcacgggcgagagaccggacgataacacc
agcagcggggagactgaggaggaggaggagaggaagaaacgtcaagaggagcacaacaac
aacaacaacaacaacgaggaagaggaagacgacgacgaagacgacgaggggcatctgggc
ctgaccggcccgcgggccaagcggcggtgccgggaggtcttcccgcagtgggacggtctg
tgcgaaggcgaggacgcgctggacgagatgctgcagtacctgggcgtgtccagtcccgag
tgcctgcagcgcgccggcgctccgctcaacatcccggcgccgcagcccgcctgcgtgtcc
gagaagcaggagaccgacgtcatcaacgccatcctcaagcagtgcgccgacgagcgcgac
tttgccacgcaccgcggcaacgggctcaacatgagggcctcgcggcagggccagccgggg
gcccagaggccccagagcgccttctactactgccgcatgctgctcaacatcctgggcatg
aactcctgggagaagaggagtagcttccacctgctgaagaagaacgagaagctgttgaga
gagctgaagaacctggactccagacagtgccgtgagacgcacaagatcgccgtgttctac
gtggcggaggggcaggaggataagcactccatcctgtccaacaccagtggcagccaggcc
tacgaggactttgtgtctggcctgggctgggaggtgaacctaacgagccactgtggcttc
atgggtggcctgcagagaaaccggagcacgggtcagaccatgccctacttcgccacctcc
accgtggaggtcatgttccacgtgtccacacgcatgccccccgactcagacgactcactc
accaagaagctgaggcacctgggtaatgacgaagtgcatattgtgtggtcggagcactcg
cgagactaccggagaggcatcatccccaccgagtttggagacgtcctcatcatcatctac
cccatgaagaaccacatgtacagcatccagatcatcaagaagccagaggtgccattcttt
gggcccctgtttgacggggccatagtggacagcaagattctgccagcgatagtgagggcc
acggccatcaacgccagccgagcgctcaagtccctcatcccgctctaccagaacttctac
gaggaaagagcccgttacctggaaaccattgtccagcatcacctggagccgaccaccttt
gaggactatgcagcacgtgtcttttgccccgccccttaccaccatctcccttccgaagca
ggctcatgccacgagactcagtcagccgaaagcccagcagcaatggcggcggtagcagga
gacgggagcgactcagcctcgccaatgtcccctcgtgctagcaagagccgcatgtccatg
aagctgcgacgctcctccggctcggccaataagacctga
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