Clupea harengus (Atlantic herring): 105899590
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Entry
105899590 CDS
T09045
Name
(RefSeq) uncharacterized protein LOC105899590
KO
K24929
tetratricopeptide repeat protein 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105899590
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
105899590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_9
TPR_16
TPR_14
TPR_19
TPR_12
ARM_TT21_N
TPR_CcmH_CycH
NatA_aux_su
TPR_BSK1_C
TPR_Slam
ANAPC3
ChAPs
Motif
Other DBs
NCBI-GeneID:
105899590
NCBI-ProteinID:
XP_042565743
UniProt:
A0A8M1KTG7
LinkDB
All DBs
Position
14:complement(10376955..10415536)
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AA seq
1639 aa
AA seq
DB search
MSDKEAYKTIHHLCTTEASQVLPVELQLVSRVCHASRQLGAVPESLQQRATLKWSSELLD
AHRVVSEGVPPEALPATEQEDCVSEQSAENSLALADWKRIAEYYVERPRILMHGRATPLC
DQEMKMFWSPAPPKFRCAPSFLKDKLFPKYQVVLQPTVSMKLLCLTLILSICDPCGQLKR
PSSAPLLNASADADLRIRADFNSIISELEVVGKLRQSLTTRDVQQQQQQQQQAHQPTSQA
SLVKASQGSDTEAERVVDPHLLQARPHVRPQRQQSSRVRAVQEDLSQRSIPARRRGAKAG
RKLRPGKLAEILSQLKEKPCTLLRSESVRLLPQTGSASGLCGSLLRWPSQPLLLDFQGFA
TERGGVPPEVEVREWVREIWNAWFDEVFPPLKESASRIIVDSRRNALVVDSERTETREVT
PELENVDLSKALPEGVTVADLQEEVEALSQAMAQQKTVGAFDLCRRGGLYKKLGLLNQAM
EDLNQAISLEPGLLDAYWHRHSIYLLRKDDSSALNDLNFIIKHTKKHADAFHSRAEIYRA
RGQSTLAIINFTKAIRCRPEDDKNYFRRAQIYMQTNEILLAMEDYAKVHRKHMHTHTHTH
THTHTHRQMFGMPWKSAFCELVKTLLFVSGIIFSYLMSHLTSFFFFFFKLQTYSVNHKRT
DALMIHGQHYFQNSNWLVALADFSSVLHQEPGHAEASYNLSSLEYRECVIPYLLTRPTAL
TGSWSLTIRNHRKATTLPHTVLLYHRTYRGQIYVKLGQFNNAADDLSLALHLNPNNWLAF
YHRGCLVRKRQPESGIRDLSTSVLINDSPANVSAFLHRGLIYSDLRLWKQALADFETVVK
VDSTIAVAHVNLGLIYMLKMNQQHEAIQMFTNALKVNPTYVRAYICRAKAFHIAGDLKSA
LKDLTRASHMKPDVQQLYILRGQYLCDMGLFTQATRCIEYAAEMSQVHTQNYIITLCPPI
ALGSSSSVPPIALGSSPLQQAAVQSFLGNNDRAIACMTHAVGQSRLPILILVGKTQMKSN
LFPEAVESFKKALAVLCPVESHPVTAPEAAQIYHLMGMCYMSQDLLQQACDAFTNALKIN
PDYADAYHQRGLCRMRLNQSRSVQDFNRALSLNPYFFQVYLSRATFYGTNSRYSTAILNC
NEAIKIQPNSVRAYLYRGAFKYFLKVYNGAVEDLTTAVKLDRTCSFAYYNRAVCHHQMKE
YEQALRDYSIVLLLPEQREIGLKVMINRGLLYMELNDHHNALAVWRDSNSARCKTAKSLV
SASTTDFITASKRKPKDTAIHHAVGVYHHRLGQLHQSVESYTAAIRLLPFSLDAYVGRGS
VYMDYGHAQANKQAQRDFLSALHLNPLSVNARICLAYNFQVFGCFQKAWNQFTIASEISP
SSWAAYEGRAIVNLQMGNLYAAFQDISKALRHNPLHDQLLTNRGVISQYMGDKSTAMQDY
QKAISVNPDYSLAYFNAANLYFFNRQFEKALEYYSEAIKLDPGDESAVLNRAITLTLLRK
VPEALQDFTQALRLNPHFSHVFLNRANLYCSLRKYRSAERDLTQGWALLCSSVLSVILIH
FLALFFFFTFPGCFTAGSVVVDSRLHLFSPSIDLLPSDALLYKLRADVRGHLGLTQQALQ
DYGTALELQEAQDSLVTPR
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaggaggcgtataagaccatccaccacctgtgcaccactgaagccagccag
gtcctgcctgtggaactgcagctggtgtccagggtctgccacgcctccaggcagcttggc
gcagtacctgagtctctccagcagagggcaacactcaaatggagctctgagctgctggat
gcacacagggttgtgagtgaaggtgttccgccagaggccctccctgccacagagcaggag
gactgtgtgtctgagcagtccgcagagaactcgctggctctggcggactggaaacgcatc
gctgaatactatgtggagagaccccgcatcctgatgcacggacgggctactccactgtgc
gaccaagagatgaaaatgttctggagcccagctccaccaaagttcagatgtgcacccagc
ttcctgaaggacaagctcttccccaaataccaggtagtgttgcaacccacagtgtctatg
aagttattatgtttaactttgatcctttctatttgcgatccctgtggccagttgaagcgt
ccctcttccgccccgctcctgaacgccagtgctgatgccgacctcaggatcagggccgac
ttcaactccatcatctccgagctggaggtggtggggaagctcaggcagtctctgaccacc
agagacgtccagcagcagcagcagcagcagcagcaggcccaccagcccaccagccaggct
tcactggtcaaggcctcccagggctcagacacggaggcggaaagagtggtggacccccac
ctgcttcaggcacggccccacgtccgcccgcagcgccagcagagctcccgggtccgggcg
gtgcaggaggacctgtcccagaggagcatccccgccaggcgcaggggggccaaggcaggg
aggaagctaaggcctggtaagctggcggagatcctgagccagctgaaggagaagccctgc
acactgctcaggagtgaatctgtgagactgttgccccagacgggttctgccagtggactg
tgtggcagcctcctgcgctggcccagccagccactcctgctggacttccagggtttcgcc
actgagcgtggaggcgtaccgccggaggtggaggtgcgtgagtgggtgcgggaaatctgg
aatgcctggtttgacgaggtcttccccccactgaaggagagcgccagccgcattatcgtg
gacagccggaggaacgccttggttgtcgacagcgagcggacggagacccgcgaggtgact
ccggagctagagaacgtggacctgtccaaggcgctccccgagggggtcaccgtggccgac
ctgcaggaggaggtggaggccctgagccaggccatggcccagcagaagacagtcggcgcc
tttgacttgtgccgtcgcgggggactgtacaagaagctcggcctcctcaaccaggccatg
gaggacctcaaccaggccatatccctggagccgggcttacttgatgcctactggcacaga
cacagcatttatctgctcagaaaggacgacagcagtgccctgaatgacctcaacttcatc
atcaagcacacaaagaagcatgccgatgcgttccactccagggctgaaatctacagggcc
agaggacagagcactctggccattatcaacttcaccaaggccatcagatgcaggccagag
gatgataagaactacttcaggagggcccagatttacatgcagacaaatgagatactgctg
gccatggaggactacgctaaagtacaccgcaaacacatgcacacacacacacacactcac
acacacacacacacacacagacaaatgtttggaatgccatggaagagtgctttttgtgag
ctcgtgaagacattgctatttgtgtcaggcataatcttttcttacctcatgtctcacctc
acctcatttttctttttcttttttaaattgcagacatacagcgtaaaccataaaaggacg
gacgccctgatgatccacgggcagcactacttccagaactcaaactggctggtggcgctc
gcagacttctcctcagtgctgcatcaggagccgggacatgccgaggccagttataacctt
tcaagtttggagtatcgagagtgcgtaatcccctacctgctgaccagacccacggccttg
actggatcttggagtttgaccattagaaaccatagaaaggccaccacactgcctcacaca
gtccttttgtaccacaggacctaccggggccagatctacgtcaagctgggtcagtttaac
aatgctgcggacgacttgtccctggccctgcacctgaaccccaacaactggctggccttc
taccaccgtggctgcctggtgcgaaagagacagcctgagagtggtatcagggacctgagc
acatctgtgctgatcaacgacagcccggcaaacgtcagcgccttcctgcaccgtggcctg
atctactccgacctcaggctgtggaaacaggccctggctgactttgaaaccgtcgtcaaa
gtcgacagcactatagccgtggcccatgtgaacctgggccttatttacatgctgaagatg
aaccaacaacacgaggccatccagatgtttaccaatgccctgaaagtaaaccccacctac
gttcgagcttacatctgccgtgccaaggccttccatattgcgggtgatttgaagagtgct
ttgaaggatctgacccgtgcctcacacatgaagcctgacgttcagcagctctacatcctg
aggggtcagtatttatgcgacatgggattgttcacccaggcaacccgctgcatcgagtat
gcggctgagatgagccaagtacacactcagaattatatcatcaccctctgtccccccata
gcactgggctcatcatcctctgtcccccccatagcactgggctcgtccccattgcagcag
gctgctgtgcagtctttcctggggaacaacgacagggccatcgcctgcatgacacacgct
gtgggccagagccgtctccccatcctcatcctcgtggggaagacgcagatgaagtcaaac
ctgttcccggaggcggtggagagctttaaaaaggccctggcggttctgtgccctgtggag
agtcacccagtgactgcaccagaggccgctcagatctaccacctgatgggaatgtgctac
atgtcccaggacctcctgcagcaggcttgtgatgcgttcactaatgcgttgaagatcaac
ccggactacgccgacgcctaccaccaacgtggcctgtgccgcatgcggctcaaccagagc
aggagtgttcaggacttcaaccgcgcgctgtccctcaacccctacttcttccaggtgtat
ttgagtcgtgcaaccttctatgggaccaacagccgatattctacagctattctgaactgc
aacgaagccatcaagatacagccaaacagcgtgagggcatatctgtacagaggtgctttc
aaatacttcctcaaggtgtacaatggagcagtggaagacctgaccacagccgtcaaactc
gaccgcacctgctcttttgcttactacaaccgtgccgtgtgccaccaccagatgaaggaa
tacgagcaggccctgcgagactacagcattgtcctcctgctccccgaacagagggagatc
ggccttaaagtaatgatcaaccgcggccttctctacatggagcttaacgatcatcacaat
gccttggcggtatggagggattccaattcagcgcggtgtaaaactgccaagagcctcgtc
tcagcctccaccactgatttcataacagcctcaaagagaaaaccaaaggatacggccatc
caccatgccgtgggagtgtatcatcacaggctgggccagctgcatcagtctgtggagtcc
tacacagcggccattcggcttctccccttctccctggacgcctacgtgggccggggcagc
gtctacatggactacggccacgcccaggctaacaagcaggcacagagggactttctgtct
gccctacacctcaatccgctctctgtcaatgcacgcatctgcctagcgtacaactttcag
gtttttggatgtttccagaaggcctggaatcaattcaccatcgcctcggagatcagccct
tcaagctgggccgcctacgagggcagagccattgtcaacctgcagatggggaatctctat
gctgccttccaggacatcagcaaagcactgaggcacaacccactgcacgaccagcttctc
actaaccgcggcgttataagccagtacatgggagacaaatccactgctatgcaggactac
cagaaggctatatctgtgaaccccgactactctttggcctacttcaatgctgcaaacctc
tactttttcaacaggcagtttgaaaaggccctggagtactacagcgaggccatcaagctg
gaccccggggacgagtctgcggtgctcaaccgcgccatcacgctcaccttgctgcggaag
gttccggaagccttgcaggacttcacccaggccttgcggctcaacccacacttctcgcat
gtgttcctaaaccgggccaacctctactgctccctgaggaagtaccgcagtgcagagagg
gacctgactcaaggttgggctctcctctgctcctctgtgctctctgtcattctcattcat
tttctggctcttttttttttttttacctttcctggttgtttcacggctggctctgtagtt
gtagattcccgcctccatcttttctctccatctattgacctgctgcccagtgatgccttg
ctgtataaactgcgtgctgatgtgcgtggtcacctgggccttacccagcaggccttgcag
gactatggcaccgcgctggagctccaggaggcacaggattcattagtcactccccgctga
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