Clupea harengus (Atlantic herring): 105899594
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Entry
105899594 CDS
T09045
Symbol
nfkbiab
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b
KO
K04734
NF-kappa-B inhibitor alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04210
Apoptosis
char04620
Toll-like receptor signaling pathway
char04621
NOD-like receptor signaling pathway
char04622
RIG-I-like receptor signaling pathway
char04623
Cytosolic DNA-sensing pathway
char04625
C-type lectin receptor signaling pathway
char04920
Adipocytokine signaling pathway
char05132
Salmonella infection
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105899594 (nfkbiab)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105899594 (nfkbiab)
04621 NOD-like receptor signaling pathway
105899594 (nfkbiab)
04622 RIG-I-like receptor signaling pathway
105899594 (nfkbiab)
04623 Cytosolic DNA-sensing pathway
105899594 (nfkbiab)
04625 C-type lectin receptor signaling pathway
105899594 (nfkbiab)
09152 Endocrine system
04920 Adipocytokine signaling pathway
105899594 (nfkbiab)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105899594 (nfkbiab)
09171 Infectious disease: bacterial
05132 Salmonella infection
105899594 (nfkbiab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105899594 (nfkbiab)
04131 Membrane trafficking [BR:
char04131
]
105899594 (nfkbiab)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
105899594 (nfkbiab)
Membrane trafficking [BR:
char04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
105899594 (nfkbiab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
105899594
NCBI-ProteinID:
XP_012682246
Ensembl:
ENSCHAG00000005020
UniProt:
A0A6P3VVB9
LinkDB
All DBs
Position
14:11703964..11706735
Genome browser
AA seq
311 aa
AA seq
DB search
MDFYQPYRHNQMDHNAESRDSKLGKGLQNIDDRVDSGVDSLREDVAAELERVRLDCVPAP
RIPENCCEPWRKELTEDGDTLLHLAIIHEAKDHAMKMIDLSVNHSFLNTQNYQRQTPLHL
AVITEQPAVLAQLMSAGCDPQLVDNSGNTALHIACKKGSVTCFSVLTQACSSSQLTAMLT
TLNYSGQNCLHLVSIHGYLALVERLVELGADINAQEQCNGRSPLHLAVDLQNQDLVHLLI
SRGADVNSLTYGGHTPYHLTYGRPNTAIQKELYELTAQHLRELPDSESEDSEEDDECQSD
DEMYDDIQLMG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatttctaccagccatacagacacaaccaaatggatcataacgccgagagtcgagat
tccaagttggggaaagggcttcagaacatcgacgaccgtgttgatagcggtgtggattcg
cttagagaggatgtagctgctgaactggagcgagtgcgtttggattgcgtaccagctccc
cggatacccgaaaactgctgtgaaccatggaggaaagaactgaccgaggacggagacacc
ctcctgcatctggcaatcattcacgaagccaaagatcatgccatgaaaatgattgacctg
tcagtcaaccactcattcctcaacacacagaactatcaaagacagactcccctgcacttg
gcagtaatcacagagcagccggcagtgttagcccaattgatgagcgctggctgtgacccc
cagctggtggacaacagcgggaacacggccctgcacatagcctgcaagaagggctctgtc
acctgcttcagcgtgctcacccaggcctgctccagctctcagctcaccgcaatgctcacc
acgctcaactacagcggtcaaaactgtttacacctggtttccattcatgggtaccttgcg
ctggttgagagactggttgagctgggagctgatatcaatgcacaggagcagtgcaatggc
cggtctccccttcacctggcagtagacctccagaaccaggacctggtgcaccttctgatc
agcagaggggccgatgtcaacagcctgacgtacggaggccacacgccgtaccacctgacc
tacggtcgccccaacaccgccatccagaaggagctgtacgagctgaccgcccagcacctg
cgcgagctgcccgacagcgaatcagaggacagcgaggaggacgacgagtgccaatcagat
gacgagatgtatgatgatattcagctgatgggatag
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