KEGG   Clupea harengus (Atlantic herring): 105899595
Entry
105899595         CDS       T09045                                 
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04814  Motor proteins
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    105899595 (dctn1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105899595 (dctn1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105899595 (dctn1b)
   03036 Chromosome and associated proteins [BR:char03036]
    105899595 (dctn1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105899595 (dctn1b)
Membrane trafficking [BR:char04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    105899595 (dctn1b)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     105899595 (dctn1b)
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     105899595 (dctn1b)
SSDB
Motif
Pfam: Dynactin CAP_GLY ATG17_like Baculo_PEP_C Gemin7
Other DBs
NCBI-GeneID: 105899595
NCBI-ProteinID: XP_031435913
Ensembl: ENSCHAG00000009951
UniProt: A0A6P8G949
LinkDB
Position
14:complement(12617669..12656998)
AA seq 1266 aa
MSQTKRYTYSRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGHRGTVAYIGNTLFASGKWV
GVILDEPKGKNDGTVQGKRYFTCQENHGIFVRQSQIQLVDDGENTTSPETPELATSKVPK
RDILDTSKSAKLRGAKPKKTPAPRKTTARRPKSTRPVGKMGSGSASAAEMSSSEPSTPAQ
TPLAAPILPSPVGTLPSPGAPPLPAPSKEEEALRGQVKDLEEKLETLKLKRQEDKAKLKE
LEKHKIQLEQLQEWKSKMQEQQNDLQKQLKEAKKEAKDALEAKEHYMEEMSDTADAIEMA
TLDKEMAEERAESLQIEVDSLKERVEELSMDLEILKHEIEEKGSDGAASSYHVKQLEEQN
GRLKEALVRMRDLSSSEKQEHLKLQRQTEKLNGDLDGLRDQRDKLTQELRGSEKTVDELK
EQVDAALGAEEMVEMLTERNLDLEEKVREMRETVSDLEAINEMNDELQENGRETELELRE
QVDLATTKVREAEKRVEAAQETVADYQQTIQKYRELTAQLQEVNRDLMSQQEAEQQQPAP
TDMFDFKIKFAETKAHAKAIEMELRQVEVSQANRHVSLLMAFMPESFLRHGGDHDSVLVL
LLIPRLMCKAELVSKQAREKFDLTESCIEGVGMRGGPGEQRSFAAGLVYSLSLLQATLHK
YEQALNQCSVEVYKKIGVLYAELSAHERSLDFLIDLLHRDQLDETVNVEPLTKAIKYYQH
LYSIHLADQPEDCTMQLADHIKFTQSALDCMAVEAARLRAFLHPGQEEAGLTVLLKDLET
SCSDVRQFCKKIRRRMPGTDAHGIPEALSFGPQVSETLSECRKQLTWVVAVLQEVAAAGA
QLIGPLSEQEGLSAVKVEDMAFKAAEQIYGSQGINPHECLRQSCNIVIATMNKMATAMQE
GEYDAEKPQTGTPPIALRATALRAEFTDAEGRGLKLEDRETVIKELKKSLKIKGEELSEA
SVRLSLLEKKLDSSSKDADERVEKIQTQLDETLAVLKKKEKEFEETMDALQADIDQLESE
KAELKQRINSQSKMTIEGLRGSPNSGIASIVTGITGEEQKESGAVYSPGVCPGVGMQVVD
SPLLMQQIEAQRLSIKHLKNENNRFKADKMRSQLASLPPLCVPRLPVVGGSEVQSGALYR
KTQQLLETLLQMSANVRVVDITGKSPVSPSGQLLEQTSRLQSLSETLDRLKDEVAEHVVT
QKPGARVSSDFATFPCTSFVKAKEERRGETVLIGRVMVPCSRGQEAVHRLVLSQPDLQTV
HRLLLT
NT seq 3801 nt   +upstreamnt  +downstreamnt
atgtctcagactaagagatacacgtacagcaggaccactagcagtggcagtagcaggatg
agttcagacggaggtggtcgtccggtgaaggtgggctcgctggtggaggtgatcgggaag
ggtcaccggggaaccgtggcgtacatcggcaacacgctcttcgcctcgggcaagtgggtc
ggggtcattctggacgagcccaagggcaagaatgacggaaccgtgcagggcaagcgctac
ttcacctgccaggagaaccacggaatatttgtacgacaatcacagattcagttggtggat
gatggagagaacactacttcacctgagacccctgaacttgctacatctaaagtgccaaaa
agagacatactggacacctcgaaatcggcgaaactgcgaggagccaaacctaagaagacg
cctgccccccgtaagactacggccagacggcctaagtccactcgtccggtgggaaagatg
ggctccggttcggcctctgcagctgaaatgagcagcagtgagcccagcactcctgctcaa
acgccattggctgctcccattctcccctccccagtggggacactcccatctccgggagcc
ccgcccctcccagcgcccagcaaggaggaggaggcgctgcgtggccaggtgaaggacctg
gaggagaagctggagacgctgaagctgaagcggcaggaggacaaggccaaactcaaggag
ctggagaagcacaagatccagctggagcagctgcaggagtggaagagcaagatgcaggag
cagcagaacgacctgcagaaacagctcaaggaggccaagaaggaagccaaagacgctctt
gaggctaaggagcactacatggaggagatgtcggacacagcggacgctatagagatggct
actctggacaaggagatggccgaggagagggcagagtcactccaaatagaagtggactca
ttgaaggagagggtagaggagctgagcatggacctggagatcctcaaacacgagatagag
gagaaaggttcagatggtgctgcctccagttatcacgtgaaacagttagaggagcagaat
ggacgactaaaagaggccttggtcaggatgcgggacctgtcatcctcagagaagcaggag
catcttaagctgcagaggcagacggagaagctgaatggtgatctggacgggctgcgcgac
cagagagacaaactcacgcaggagctgcgtggttcagagaagaccgtagatgagctgaag
gagcaggtggatgcggcgctgggtgcagaggagatggttgagatgctgactgaaaggaat
cttgacctggaggagaaagtgagagagatgagagagactgttagtgacctggaggccatt
aacgagatgaatgacgagctccaggagaacggccgtgagacagagctggagctgagggag
caggtggatctggctaccactaaggtccgagaggcagagaagcgcgtggaggcggcgcag
gagaccgtggctgactaccagcagaccatccagaagtaccgcgagctcaccgctcagcta
caggaagtgaaccgtgatttgatgagccagcaggaggcggagcagcagcagcctgcacct
actgacatgttcgatttcaagatcaaatttgctgaaaccaaagcccacgctaaggccatt
gagatggagcttcggcaggtggaggtgtcccaggctaacagacacgtgtctctgctcatg
gccttcatgccggagtcattcctgaggcacggcggggaccacgactccgtgctggtgctg
ctgctcatacccaggctcatgtgcaaggctgagctagtgagtaagcaggctcgggagaag
tttgacctgacggagagctgcatagagggggttgggatgagaggagggcctggggagcag
aggagcttcgctgctggactcgtctactccctcagcctgctgcaggccacgctacacaaa
tatgaacaagccctgaatcagtgcagtgtggaggtgtataagaagattggagtgctgtac
gctgagcttagtgcacacgagcgatcactggacttcctcatagacctgctgcacagagac
cagctggacgaaacagtcaatgtggagcccctcaccaaagccatcaagtactatcagcat
ctgtatagtatccacctggcagaccagcctgaggactgcactatgcaactggcagaccac
attaagtttacccagagtgcattggactgcatggctgtggaggcggcgcgtctgcgtgcc
ttcctgcaccctggacaggaggaggcgggtctcaccgtcttgttgaaggacctggagact
tcctgttcggacgtgaggcagttctgcaagaagatccgccgccgcatgcctggcacagac
gcccatggtatcccagaagccctcagctttggcccgcaggtgtcagagacgctgtcagag
tgcaggaaacagttgacctgggtggtggccgtactacaggaagtagcagcagcaggggca
cagctgattggtcccctgagcgaacaggaagggctctctgcagtcaaagtggaggatatg
gccttcaaagcagcagagcagatctatggaagtcagggcataaacccacacgagtgtctg
cgccagtcatgcaacattgtaatagcgaccatgaacaagatggccacggccatgcaggag
ggagagtatgatgctgagaaaccacagactgggacaccgccgattgctctgcgtgccacc
gctctgagggcggagttcacggatgcagaggggcgtggcctcaaactagaggacagagag
actgtcataaaggagctaaagaaatccctcaagatcaagggagaagaactgagcgaggcg
agtgtccgtctcagcttgctggagaagaagttggacagctcgtctaaagatgcggatgaa
cgtgtggaaaagattcagactcaactggacgagacactagctgtgctgaaaaagaaagag
aaggagtttgaagagaccatggatgctctgcaggctgacattgaccagctggagtcagag
aaggcagagttaaaacagcgcatcaatagccaatcaaagatgaccatcgaagggttgcga
ggaagtcccaactctggcattgcctctatcgtcactgggatcacaggagaggaacagaaa
gagtctggagccgtctattctccgggtgtgtgtccaggtgttggaatgcaggttgttgac
tctcctctgctgatgcagcagatcgaagctcagaggctcagtattaaacacctgaaaaat
gagaacaacagattcaaggcagataagatgcgttcccagcttgcatccctgccccctctg
tgtgtgcccaggctgccagtggtggggggcagtgaggtacagtctggggctctctaccgc
aaaacccagcagctcctggagacactgctgcagatgagcgccaatgtcagagtggtggac
atcaccggcaaatcaccagtaagccccagtggccagctgttagagcagacatccagacta
cagtccttgagtgaaactctagatcgactaaaggatgaagtagctgagcatgtggtgact
cagaagcctggggcgcgtgtctcgtcggactttgccactttcccttgcacctcttttgtg
aaggcaaaggaggagagaagaggtgagactgttctgattggccgagtgatggttccatgc
tcgcgagggcaggaggcggtgcatcggctcgtcctatcacagcctgatctgcagacagtg
caccggctgcttcttacataa

DBGET integrated database retrieval system