Clupea harengus (Atlantic herring): 105899595
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Entry
105899595 CDS
T09045
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04814
Motor proteins
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
105899595 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105899595 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105899595 (dctn1b)
03036 Chromosome and associated proteins [BR:
char03036
]
105899595 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105899595 (dctn1b)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105899595 (dctn1b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
105899595 (dctn1b)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
105899595 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
ATG17_like
Baculo_PEP_C
Gemin7
Motif
Other DBs
NCBI-GeneID:
105899595
NCBI-ProteinID:
XP_031435913
Ensembl:
ENSCHAG00000009951
UniProt:
A0A6P8G949
LinkDB
All DBs
Position
14:complement(12617669..12656998)
Genome browser
AA seq
1266 aa
AA seq
DB search
MSQTKRYTYSRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGHRGTVAYIGNTLFASGKWV
GVILDEPKGKNDGTVQGKRYFTCQENHGIFVRQSQIQLVDDGENTTSPETPELATSKVPK
RDILDTSKSAKLRGAKPKKTPAPRKTTARRPKSTRPVGKMGSGSASAAEMSSSEPSTPAQ
TPLAAPILPSPVGTLPSPGAPPLPAPSKEEEALRGQVKDLEEKLETLKLKRQEDKAKLKE
LEKHKIQLEQLQEWKSKMQEQQNDLQKQLKEAKKEAKDALEAKEHYMEEMSDTADAIEMA
TLDKEMAEERAESLQIEVDSLKERVEELSMDLEILKHEIEEKGSDGAASSYHVKQLEEQN
GRLKEALVRMRDLSSSEKQEHLKLQRQTEKLNGDLDGLRDQRDKLTQELRGSEKTVDELK
EQVDAALGAEEMVEMLTERNLDLEEKVREMRETVSDLEAINEMNDELQENGRETELELRE
QVDLATTKVREAEKRVEAAQETVADYQQTIQKYRELTAQLQEVNRDLMSQQEAEQQQPAP
TDMFDFKIKFAETKAHAKAIEMELRQVEVSQANRHVSLLMAFMPESFLRHGGDHDSVLVL
LLIPRLMCKAELVSKQAREKFDLTESCIEGVGMRGGPGEQRSFAAGLVYSLSLLQATLHK
YEQALNQCSVEVYKKIGVLYAELSAHERSLDFLIDLLHRDQLDETVNVEPLTKAIKYYQH
LYSIHLADQPEDCTMQLADHIKFTQSALDCMAVEAARLRAFLHPGQEEAGLTVLLKDLET
SCSDVRQFCKKIRRRMPGTDAHGIPEALSFGPQVSETLSECRKQLTWVVAVLQEVAAAGA
QLIGPLSEQEGLSAVKVEDMAFKAAEQIYGSQGINPHECLRQSCNIVIATMNKMATAMQE
GEYDAEKPQTGTPPIALRATALRAEFTDAEGRGLKLEDRETVIKELKKSLKIKGEELSEA
SVRLSLLEKKLDSSSKDADERVEKIQTQLDETLAVLKKKEKEFEETMDALQADIDQLESE
KAELKQRINSQSKMTIEGLRGSPNSGIASIVTGITGEEQKESGAVYSPGVCPGVGMQVVD
SPLLMQQIEAQRLSIKHLKNENNRFKADKMRSQLASLPPLCVPRLPVVGGSEVQSGALYR
KTQQLLETLLQMSANVRVVDITGKSPVSPSGQLLEQTSRLQSLSETLDRLKDEVAEHVVT
QKPGARVSSDFATFPCTSFVKAKEERRGETVLIGRVMVPCSRGQEAVHRLVLSQPDLQTV
HRLLLT
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagactaagagatacacgtacagcaggaccactagcagtggcagtagcaggatg
agttcagacggaggtggtcgtccggtgaaggtgggctcgctggtggaggtgatcgggaag
ggtcaccggggaaccgtggcgtacatcggcaacacgctcttcgcctcgggcaagtgggtc
ggggtcattctggacgagcccaagggcaagaatgacggaaccgtgcagggcaagcgctac
ttcacctgccaggagaaccacggaatatttgtacgacaatcacagattcagttggtggat
gatggagagaacactacttcacctgagacccctgaacttgctacatctaaagtgccaaaa
agagacatactggacacctcgaaatcggcgaaactgcgaggagccaaacctaagaagacg
cctgccccccgtaagactacggccagacggcctaagtccactcgtccggtgggaaagatg
ggctccggttcggcctctgcagctgaaatgagcagcagtgagcccagcactcctgctcaa
acgccattggctgctcccattctcccctccccagtggggacactcccatctccgggagcc
ccgcccctcccagcgcccagcaaggaggaggaggcgctgcgtggccaggtgaaggacctg
gaggagaagctggagacgctgaagctgaagcggcaggaggacaaggccaaactcaaggag
ctggagaagcacaagatccagctggagcagctgcaggagtggaagagcaagatgcaggag
cagcagaacgacctgcagaaacagctcaaggaggccaagaaggaagccaaagacgctctt
gaggctaaggagcactacatggaggagatgtcggacacagcggacgctatagagatggct
actctggacaaggagatggccgaggagagggcagagtcactccaaatagaagtggactca
ttgaaggagagggtagaggagctgagcatggacctggagatcctcaaacacgagatagag
gagaaaggttcagatggtgctgcctccagttatcacgtgaaacagttagaggagcagaat
ggacgactaaaagaggccttggtcaggatgcgggacctgtcatcctcagagaagcaggag
catcttaagctgcagaggcagacggagaagctgaatggtgatctggacgggctgcgcgac
cagagagacaaactcacgcaggagctgcgtggttcagagaagaccgtagatgagctgaag
gagcaggtggatgcggcgctgggtgcagaggagatggttgagatgctgactgaaaggaat
cttgacctggaggagaaagtgagagagatgagagagactgttagtgacctggaggccatt
aacgagatgaatgacgagctccaggagaacggccgtgagacagagctggagctgagggag
caggtggatctggctaccactaaggtccgagaggcagagaagcgcgtggaggcggcgcag
gagaccgtggctgactaccagcagaccatccagaagtaccgcgagctcaccgctcagcta
caggaagtgaaccgtgatttgatgagccagcaggaggcggagcagcagcagcctgcacct
actgacatgttcgatttcaagatcaaatttgctgaaaccaaagcccacgctaaggccatt
gagatggagcttcggcaggtggaggtgtcccaggctaacagacacgtgtctctgctcatg
gccttcatgccggagtcattcctgaggcacggcggggaccacgactccgtgctggtgctg
ctgctcatacccaggctcatgtgcaaggctgagctagtgagtaagcaggctcgggagaag
tttgacctgacggagagctgcatagagggggttgggatgagaggagggcctggggagcag
aggagcttcgctgctggactcgtctactccctcagcctgctgcaggccacgctacacaaa
tatgaacaagccctgaatcagtgcagtgtggaggtgtataagaagattggagtgctgtac
gctgagcttagtgcacacgagcgatcactggacttcctcatagacctgctgcacagagac
cagctggacgaaacagtcaatgtggagcccctcaccaaagccatcaagtactatcagcat
ctgtatagtatccacctggcagaccagcctgaggactgcactatgcaactggcagaccac
attaagtttacccagagtgcattggactgcatggctgtggaggcggcgcgtctgcgtgcc
ttcctgcaccctggacaggaggaggcgggtctcaccgtcttgttgaaggacctggagact
tcctgttcggacgtgaggcagttctgcaagaagatccgccgccgcatgcctggcacagac
gcccatggtatcccagaagccctcagctttggcccgcaggtgtcagagacgctgtcagag
tgcaggaaacagttgacctgggtggtggccgtactacaggaagtagcagcagcaggggca
cagctgattggtcccctgagcgaacaggaagggctctctgcagtcaaagtggaggatatg
gccttcaaagcagcagagcagatctatggaagtcagggcataaacccacacgagtgtctg
cgccagtcatgcaacattgtaatagcgaccatgaacaagatggccacggccatgcaggag
ggagagtatgatgctgagaaaccacagactgggacaccgccgattgctctgcgtgccacc
gctctgagggcggagttcacggatgcagaggggcgtggcctcaaactagaggacagagag
actgtcataaaggagctaaagaaatccctcaagatcaagggagaagaactgagcgaggcg
agtgtccgtctcagcttgctggagaagaagttggacagctcgtctaaagatgcggatgaa
cgtgtggaaaagattcagactcaactggacgagacactagctgtgctgaaaaagaaagag
aaggagtttgaagagaccatggatgctctgcaggctgacattgaccagctggagtcagag
aaggcagagttaaaacagcgcatcaatagccaatcaaagatgaccatcgaagggttgcga
ggaagtcccaactctggcattgcctctatcgtcactgggatcacaggagaggaacagaaa
gagtctggagccgtctattctccgggtgtgtgtccaggtgttggaatgcaggttgttgac
tctcctctgctgatgcagcagatcgaagctcagaggctcagtattaaacacctgaaaaat
gagaacaacagattcaaggcagataagatgcgttcccagcttgcatccctgccccctctg
tgtgtgcccaggctgccagtggtggggggcagtgaggtacagtctggggctctctaccgc
aaaacccagcagctcctggagacactgctgcagatgagcgccaatgtcagagtggtggac
atcaccggcaaatcaccagtaagccccagtggccagctgttagagcagacatccagacta
cagtccttgagtgaaactctagatcgactaaaggatgaagtagctgagcatgtggtgact
cagaagcctggggcgcgtgtctcgtcggactttgccactttcccttgcacctcttttgtg
aaggcaaaggaggagagaagaggtgagactgttctgattggccgagtgatggttccatgc
tcgcgagggcaggaggcggtgcatcggctcgtcctatcacagcctgatctgcagacagtg
caccggctgcttcttacataa
DBGET
integrated database retrieval system